Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq12752 104 2e-20
seq1483 86.0 6e-15
>seq12752
Length=18805
Score = 104 bits (114), Expect = 2e-20
Identities = 134/181 (74%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||| ||||| |||||||| |||| |||| | |||||||| |||
Sbjct 15434 CTATTACTTTGAAGAAAGTAGAGTCCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 15493
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| || | | | |||| | | | |||| |||| | | | ||| || |||||||
Sbjct 15494 GGGATGACACCACAGGAT-TCTGATCCTATCTTGTTGCTCTTCGGGATCGGA-GTAATGA 15551
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 15552 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 15611
Query 190 T 190
|
Sbjct 15612 T 15612
>seq1483
Length=11525
Score = 86.0 bits (94), Expect = 6e-15
Identities = 128/178 (72%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
||||||| || ||||||||| |||||||| |||| ||||| | |||||||| |||||
Sbjct 11288 TTACTTTAAAGAAATTAGAGTTCTCAAAGCAAGCCTATGCTCTGGATACATTAGCATGGG 11347
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | | | ||||| ||| || | | ||| || |||||||| |
Sbjct 11348 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTTGGGATCGGA-GTAATGATTA 11405
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| ||||| | | |||| || ||| || ||||| ||||||||||||
Sbjct 11406 ACAAGGACAGTCGACGACATTCATATTTCATAGTCCAATTTGAAAGTCTTGGATTTAT 11463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 510888786400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |