Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq12752 104 2e-20 seq1483 86.0 6e-15 >seq12752 Length=18805 Score = 104 bits (114), Expect = 2e-20 Identities = 134/181 (74%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||| ||||| |||||||| |||| |||| | |||||||| ||| Sbjct 15434 CTATTACTTTGAAGAAAGTAGAGTCCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 15493 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || || | | | |||| | | | |||| |||| | | | ||| || ||||||| Sbjct 15494 GGGATGACACCACAGGAT-TCTGATCCTATCTTGTTGCTCTTCGGGATCGGA-GTAATGA 15551 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 15552 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 15611 Query 190 T 190 | Sbjct 15612 T 15612 >seq1483 Length=11525 Score = 86.0 bits (94), Expect = 6e-15 Identities = 128/178 (72%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||| || ||||||||| |||||||| |||| ||||| | |||||||| ||||| Sbjct 11288 TTACTTTAAAGAAATTAGAGTTCTCAAAGCAAGCCTATGCTCTGGATACATTAGCATGGG 11347 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | | | ||||| ||| || | | ||| || |||||||| | Sbjct 11348 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTTGGGATCGGA-GTAATGATTA 11405 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| ||||| | | |||| || ||| || ||||| |||||||||||| Sbjct 11406 ACAAGGACAGTCGACGACATTCATATTTCATAGTCCAATTTGAAAGTCTTGGATTTAT 11463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510888786400