Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq80978 174 2e-41
seq31780 141 1e-31
seq80880 118 2e-24
seq26401 91.5 2e-16
seq49230 87.8 3e-15
>seq80978
Length=849
Score = 174 bits (192), Expect = 2e-41
Identities = 188/249 (76%), Gaps = 4/249 (2%)
Strand=Plus/Plus
Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88
|||| || | || | | |||||||| ||| || ||| |||||| ||||| ||| |
Sbjct 297 CAGCAGTTCTTCCATACCAACTTAGCAGCCCGGCGCTGCTATTGGCATAACAACCGGTAC 356
Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT- 147
|||| ||||| | ||| ||| |||||||||||||| || ||||||| || | |||
Sbjct 357 ACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCT 416
Query 148 ---ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204
|| || ||| |||||| ||||||||||||| ||| |||| |||||| || |||
Sbjct 417 TTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGATATTCTAAACCCAATTCACGT 476
Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACG 264
|| ||| ||| |||||||| || |||||||||||||| ||||| ||||| |||| || |
Sbjct 477 ACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAAGATGTGATG 536
Query 265 AGCCGACAT 273
|| ||||||
Sbjct 537 AGTCGACAT 545
>seq31780
Length=18751
Score = 141 bits (156), Expect = 1e-31
Identities = 182/251 (73%), Gaps = 4/251 (2%)
Strand=Plus/Minus
Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88
|||| || | || | | |||||||| | || ||| || ||| ||||| ||| |
Sbjct 10436 CAGCAGTTCTTCCATACCAACTTAGCAACTTAGAGTTGCTATTAGCATAACAACAGGTAC 10377
Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT- 147
|||| ||||| | ||| ||| ||||||||||||| || |||||| || | |||
Sbjct 10376 ACCATAGGTTGGCCCAACCCAATCCTCTCGTACTAGGGTTGCCTCCTCACAGTTCTCCCT 10317
Query 148 ---ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204
|| | ||| |||||| ||||||||||||| ||||||||| |||||| ||| ||
Sbjct 10316 TTAACAACAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCATGT 10257
Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACG 264
|| ||| ||| ||| |||| | |||||||||||| | ||||| || ||| ||| || |
Sbjct 10256 ACCACTTGAATCGGCAAACAACTGAACCCTTGGGACTTTCTTCAACCTCAGTATGTGATG 10197
Query 265 AGCCGACATCG 275
|| ||||||||
Sbjct 10196 AGTCGACATCG 10186
>seq80880
Length=1142
Score = 118 bits (130), Expect = 2e-24
Identities = 171/240 (71%), Gaps = 5/240 (2%)
Strand=Plus/Plus
Query 38 TCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGT 97
||| | ||||| ||||| |||||| ||| |||||| | ||| || || || | |
Sbjct 156 TCCATACCAAA-TTAGCAGCCCAGCGTTGCTATTGGCATAATAACCAGTACAACATATAT 214
Query 98 TTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCC 153
| | ||| ||| ||||||| |||||| || | ||||| | | ||| || ||
Sbjct 215 TGGCCCAACCCAGTCCTCTTGTACTAGGGTTGGTTCCTCGTAGTTATCCCTTTAACACCA 274
Query 154 ACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTA 213
||| |||||| ||| || |||||| | ||||||| |||| | ||| ||| || ||| |
Sbjct 275 ACGGTAGATAGGAACCAAATTGTCTCACAACGTTCTAAACCTAACTCACGTACCACTTGA 334
Query 214 ATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACAT 273
|| | |||||| |||||||||||||| ||||| ||| | |||| || ||| ||||||
Sbjct 335 ATCGACGAACAATTAAACCCTTGGGACCTTCTTCAACCCTAAGATGTGATGAGTCGACAT 394
>seq26401
Length=11034
Score = 91.5 bits (100), Expect = 2e-16
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131
|||| | |||||| |||||||||| |||| ||||||||||||||||||| ||| ||
Sbjct 10533 GGCACGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGG 10592
Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACC 169
||||||||| || |||||||| |||||| |||||
Sbjct 10593 TCCTCTCAATGCTCTAACGCCCACACCGGATATGGACC 10630
>seq49230
Length=8940
Score = 87.8 bits (96), Expect = 3e-15
Identities = 57/63 (90%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 194 CCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCC 253
||||||| ||| || ||||||||||||||||||||||||||||| || |||| |||||||
Sbjct 8084 CCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCC 8143
Query 254 AGG 256
|||
Sbjct 8144 AGG 8146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 779105399260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |