Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq77831 322 1e-85 seq47755 322 1e-85 seq56876 266 1e-68 seq65666 214 5e-53 seq23665 170 6e-40 seq20200 167 7e-39 seq47 125 2e-26 seq40246 123 7e-26 seq78475 122 3e-25 seq34883 113 1e-22 seq7626 105 2e-20 seq40508 100 9e-19 seq21280 93.3 1e-16 >seq77831 Length=5325 Score = 322 bits (356), Expect = 1e-85 Identities = 278/342 (81%), Gaps = 3/342 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 866 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 807 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 806 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 747 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| ||||||||| | || Sbjct 746 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGAAGGTAGA 687 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||| | || ||| | | | ||||| |||||||||| | ||| Sbjct 686 AGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCCGGGGAAT 627 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 626 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 567 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||| | | |||||||||| || |||||||| || |||||| Sbjct 566 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGT 526 >seq47755 Length=5186 Score = 322 bits (356), Expect = 1e-85 Identities = 278/342 (81%), Gaps = 3/342 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 3432 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 3491 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 3492 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 3551 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| ||||||||| | || Sbjct 3552 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGAAGGTAGA 3611 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||| | || ||| | | | ||||| |||||||||| | ||| Sbjct 3612 AGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCCGGGGAAT 3671 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 3672 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 3731 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||| | | |||||||||| || |||||||| || |||||| Sbjct 3732 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGT 3772 >seq56876 Length=5270 Score = 266 bits (294), Expect = 1e-68 Identities = 227/279 (81%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 4724 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 4783 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 4784 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 4843 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 || |||||||| || | |||||||| ||||||||| | ||||| ||||||||| | || Sbjct 4844 CAATGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGAAGGTAGA 4903 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||| | || ||| | | || ||||| |||||||||| ||||| Sbjct 4904 AGGCCTACGGGTCATGAACTTCTTTTCCCAGAGAAGAAGCAATGACGGTATCCGAGGAAT 4963 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATAC 436 |||| || |||||| ||||||||||||||| ||| || Sbjct 4964 AAGCATCGACTAACTCTGTGCCAGCAGCCGCGATAAGAC 5002 >seq65666 Length=4916 Score = 214 bits (236), Expect = 5e-53 Identities = 186/230 (81%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| | | || |||||||||||||| |||||||||| | Sbjct 2841 CGCGTCTGATTAGCTAGTTGGTGAAGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 2900 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 |||||| ||||| |||||| ||| ||||||||||| ||| ||||||||||||||||| Sbjct 2901 TCGAGAGGATGATCAGCCACACTGGGACTGAGACACGACCCAGACTCCTACGGGAGGCAG 2960 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| | ||||||| | || Sbjct 2961 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGTCGCGTGAAGGTAGA 3020 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTA 387 |||||| | |||| | || ||| | | || ||||| |||||||||| Sbjct 3021 AGGCCTACAGGTCATGAACTTCTTTTCCCAGAGAAGAAGCAATGACGGTA 3070 >seq23665 Length=469 Score = 170 bits (188), Expect = 6e-40 Identities = 123/142 (87%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 191 GCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGA 250 |||||||||||||| |||||||||| | | |||||| ||||| |||||| ||| ||||| Sbjct 227 GCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGA 168 Query 251 GACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGC 310 ||||||| ||| |||||||||||||||||||||||||||| || | |||||| | ||||| Sbjct 167 GACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGACGAAAGC 108 Query 311 CTGATGCAGCAACGCCGCGTGA 332 |||| | ||||| ||||||||| Sbjct 107 CTGACGGAGCAATGCCGCGTGA 86 >seq20200 Length=18404 Score = 167 bits (184), Expect = 7e-39 Identities = 238/333 (71%), Gaps = 3/333 (1%) Strand=Plus/Plus Query 169 TTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGG 228 ||| ||||||| | |||||| |||||||||||||| ||| |||| | |||||| Sbjct 101 TTAACTAGTTGATGAGGTAATAGCTTACCAAGGCGATGATTAGTAATTGGTATGAGAGAA 160 Query 229 TGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGA 288 ||||| ||||| ||| | ||||||||| ||| ||| || ||||||| ||| |||| Sbjct 161 TGATCAACCACACTGGGATTGAGACACGACCCAGACTTGTATAGGAGGCAATAGTAGGGA 220 Query 289 ATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCG 348 || || | |||||||| ||||||| | | || || ||| ||||| | |||||| | | Sbjct 221 ATTTTCCGCAATGGGCGAAAGCCTAACGGAGTAATGCCACGTGAAGGTAGAAGGCATATG 280 Query 349 GGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGAAGCCCCGG 406 |||| | || ||| | | | ||||| ||||| | || | ||| |||| | Sbjct 281 GGTCATGAACTTCTTTTCCTATAGAAGAAGCAATGATGATATTCAGGGAATAAGCATTGA 340 Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466 |||||| |||||| || |||||||| || | | || ||||||||||||||| | | Sbjct 341 CTAACTTTGTGCCAACAATCGCGGTAAGACAGAAGATGCAAGCGTTATCCGGAATGA-TT 399 Query 467 GGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 || | ||||| || || ||||| || |||||| Sbjct 400 GGACATAAAGTGTTAGTTGGTGGCTTTTTAAGT 432 >seq47 Length=16403 Score = 125 bits (138), Expect = 2e-26 Identities = 90/104 (87%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 242 TGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATG 301 ||| |||||||||||| ||| |||||||||||||||||||||||||||| || | ||||| Sbjct 1335 TGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATG 1394 Query 302 GGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCT 345 ||| ||||||||| | ||||| ||||||||| | |||||||| Sbjct 1395 GGCGAAAGCCTGACGGAGCAATGCCGCGTGAAGGTAGAAGGCCT 1438 >seq40246 Length=9070 Score = 123 bits (136), Expect = 7e-26 Identities = 147/196 (75%), Gaps = 5/196 (3%) Strand=Plus/Minus Query 306 AAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTC 365 ||||||||| | ||||| | || ||| | |||||||| | |||| | || ||| | Sbjct 5130 AAAGCCTGACGGAGCAATGTCG--TGAAGGTAGAAGGCCTACTGGTCATGAACTTCTTTT 5073 Query 366 CTCAAGGAAGAT--AATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCA 423 | | ||||| |||||||||| | | ||| |||| ||||||||| ||||||||| Sbjct 5072 CGCGGAGAAGAAGCAATGACGGTATTCGGGGAATAAGCATCGGCTAACTCTGTGCCAGCA 5013 Query 424 GCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGT 483 |||||||||| || ||| || |||||||||| |||| | | |||||||||| || || Sbjct 5012 GCCGCGGTAAGACAGAGGATGCAAGCGTTATCCAGAATGA-TTGGGCGTAAAGCGTCTGT 4954 Query 484 AGGTGGTTTCTTAAGT 499 |||||| || |||||| Sbjct 4953 AGGTGGCTTTTTAAGT 4938 >seq78475 Length=2463 Score = 122 bits (134), Expect = 3e-25 Identities = 177/244 (73%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||||||||||||||||||| || || |||||| || | || |||||||||| | Sbjct 1128 GCGTCTGATTAGCTAGTTGGTGAGC-AATAGCTTACAAATGTGATGATCAGTAGCTAGTC 1070 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 | ||||| ||||| | |||| | || |||||||||| | ||||||| |||| || Sbjct 1069 TAAGAGGATGATCAGTCACACTAGA-CTGAGACACGACTTAGACTCCTATAAGAGGTAGT 1011 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340 |||||||||| || |||||| ||||| ||| | ||||| | ||||||| | | | Sbjct 1010 AGTGGGGAATTTTTTGAAATGGGTGAAAGCTTGACGAAGCAATGTCGCGTGAAGGTAGCA 951 Query 341 GGCCTTCGGGTCGTAAAGCTC-TGTCCTCAAG--GAAGATAATGACGGTACTTGAGGAGG 397 || || | |||| | || || | |||| ||| |||| ||||||| || ||||| Sbjct 950 GGTCTGCAGGTCATGAACTTCTTTTCCTGAAGAAGAAG-CAATGACGTTATCCGAGGAAT 892 Query 398 AAGC 401 |||| Sbjct 891 AAGC 888 >seq34883 Length=18173 Score = 113 bits (124), Expect = 1e-22 Identities = 85/100 (85%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 175 AGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCG 234 ||||||| ||| || |||||||||||||| |||||||||| | | |||||| ||||| Sbjct 8181 AGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCA 8240 Query 235 GCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGA 274 |||||| ||| |||||||||||| ||| |||||||||||| Sbjct 8241 GCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGA 8280 >seq7626 Length=5844 Score = 105 bits (116), Expect = 2e-20 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 206 GATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACT 265 ||||||||| | |||||| ||||| |||||| | | |||||||||| | | | ||| Sbjct 557 GATCAGTAGTTGGTTCGAGAGGATGATCAGCCACACTAGGACTGAGACACAGCCTAGACT 498 Query 266 CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGC 325 | |||||||||||||||||| |||| || | ||||| || ||||||||| | ||||| | Sbjct 497 CGTACGGGAGGCAGCAGTGGAGAATTTTTCGCAATGAGCTAAAGCCTGACGGAGCAATGT 438 Query 326 CGC 328 ||| Sbjct 437 CGC 435 Score = 95.1 bits (104), Expect = 4e-17 Identities = 132/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 |||||| |||| || | ||||| || ||||||||| | ||||| | ||| | | | || Sbjct 377 CAGTGGAGAATTTTTCGCAATGAGCTAAAGCCTGACGGAGCAATGTCGCATTAAGGTAGA 318 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGAT--AATGACGGTACTTGAGGAGG 397 |||||| |||||| | || | | | || ||||| ||| |||||| | | | Sbjct 317 AGGCCTACGGGTCATGAACTTGTTTTTCCAGAGAAGAAGCAATAACGGTATCCGGGAAAT 258 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||| | |||||| |||||||||||| || ||| || |||||||||| Sbjct 257 AAGCATCGGCTAAGTTTGTGCCAACAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCA 198 Query 458 GAAT 461 |||| Sbjct 197 GAAT 194 >seq40508 Length=5802 Score = 100 bits (110), Expect = 9e-19 Identities = 84/102 (82%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 223 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 282 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||| | | |||||||||| || |||||||| || |||||| Sbjct 283 GAATGA-TTGGGCGTAAAGTGTTTGTAGGTGGCTTTTTAAGT 323 >seq21280 Length=568 Score = 93.3 bits (102), Expect = 1e-16 Identities = 82/101 (81%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 378 AATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437 |||||||||| | ||| |||| ||||||||| ||||||||||||||||||| || Sbjct 440 AATGACGGTATCCGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACA 499 Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGG 478 ||| || ||||||||||||||| | | |||||||||||| Sbjct 500 GAGGATGCAAGCGTTATCCGGAATGA-TTGGGCGTAAAGGG 539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1494244851840