Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq77831 262 9e-68
seq47755 262 9e-68
seq40508 250 6e-64
seq70018 176 1e-41
seq40246 120 7e-25
seq5485 93.3 1e-16
seq21280 91.5 4e-16
seq20200 73.4 9e-11
>seq77831
Length=5325
Score = 262 bits (290), Expect = 9e-68
Identities = 298/397 (75%), Gaps = 2/397 (1%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 626 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 567
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||| | ||||||||||| || |||||||| || |||||| | || ||| | | ||
Sbjct 566 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGG 507
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
|||||||| || || | |||||| | ||| |||| | | ||||||| |||||
Sbjct 506 CTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 447
Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252
| | ||| |||||||||||||||||| || | | |||||||| |||||| || |
Sbjct 446 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 387
Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312
||||| | | |||||||||||| ||||||| ||||||| || |||||||||||||
Sbjct 386 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCC 327
Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371
||||||| ||||||||||||| |||||||| | | | ||| || | | | ||
Sbjct 326 CAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAATG 268
Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | ||| ||||| ||||||| || |||||||||||
Sbjct 267 CTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 231
>seq47755
Length=5186
Score = 262 bits (290), Expect = 9e-68
Identities = 298/397 (75%), Gaps = 2/397 (1%)
Strand=Plus/Plus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 3672 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 3731
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||| | ||||||||||| || |||||||| || |||||| | || ||| | | ||
Sbjct 3732 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGG 3791
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
|||||||| || || | |||||| | ||| |||| | | ||||||| |||||
Sbjct 3792 CTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 3851
Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252
| | ||| |||||||||||||||||| || | | |||||||| |||||| || |
Sbjct 3852 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 3911
Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312
||||| | | |||||||||||| ||||||| ||||||| || |||||||||||||
Sbjct 3912 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCC 3971
Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371
||||||| ||||||||||||| |||||||| | | | ||| || | | | ||
Sbjct 3972 CAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAATG 4030
Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | ||| ||||| ||||||| || |||||||||||
Sbjct 4031 CTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 4067
>seq40508
Length=5802
Score = 250 bits (276), Expect = 6e-64
Identities = 295/397 (74%), Gaps = 2/397 (1%)
Strand=Plus/Plus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 223 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 282
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||| | ||||||||||| || |||||||| || |||||| | || ||| | | |
Sbjct 283 GAATGATTGGGCGTAAAGTGTTTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGA 342
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
|| ||||| || || | |||||| | ||| |||| | | ||||||| |||||
Sbjct 343 CTTAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 402
Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252
| | ||| |||||||||||||||||| || | | |||||||| |||||| | |
Sbjct 403 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGTACTCT 462
Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312
||||| | | |||||||||||| ||||||| ||||||| || |||||||||||||
Sbjct 463 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCC 522
Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371
||||||| ||||||||||||| |||||||| | | | ||| || | | | ||
Sbjct 523 CAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAATG 581
Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | ||| ||||| ||||||| || |||||||||||
Sbjct 582 CTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 618
>seq70018
Length=10099
Score = 176 bits (194), Expect = 1e-41
Identities = 245/341 (72%), Gaps = 2/341 (1%)
Strand=Plus/Minus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|| ||| |||| ||||||||| |||| || || |||||||| || ||| || |||
Sbjct 5345 TGGGGAATAAGCATCGGCTAACTTTGTGCTAGTAGTCGCGGTAAGACAGAGGATGCAAGC 5286
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
|||||| |||||| ||||||||||| || |||||||| || |||||| | || |||
Sbjct 5285 GTTATCTAGAATTATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGTCGTCAAA 5226
Query 125 GGCTATGGCTCAACCCCGGGACTG-CTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGC 183
||| | |||||||| || || | | | |||||| | ||| |||| | | ||||||
Sbjct 5225 TACTAGGACTCAACCCTGG-ACAGACGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGC 5167
Query 184 AAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGA 243
| ||||| | ||| |||||||||||||||| | || | ||| |||| ||| |
Sbjct 5166 AGAGAGAATTTCCGGTGGAGCGGTGAAATGCGTAAAGATCGAAAAGAATACCAACGGCAA 5107
Query 244 AGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGAT 303
| || || | | | | |||||||||||| ||||| | ||| | | || |||
Sbjct 5106 AAGCACTCTGTTAGGCCGACACTGACACTGAGAGACGAAATCTAGGGAAACGAATGAGAT 5047
Query 304 TAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAG 344
|||||| ||| ||||||| ||| ||||||||| |||||||
Sbjct 5046 TAGATATCCTAGTAGTCCTAGCCATAAACGATGGATACTAG 5006
>seq40246
Length=9070
Score = 120 bits (132), Expect = 7e-25
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||
Sbjct 5038 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCA 4979
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||| | ||||||||||| || |||||||| || |||||| | || ||| | | ||
Sbjct 4978 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGG 4919
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
|||||||| || || | |||||| | ||| |||| | | ||||||| |||||
Sbjct 4918 CTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 4859
Query 193 T 193
|
Sbjct 4858 T 4858
>seq5485
Length=5856
Score = 93.3 bits (102), Expect = 1e-16
Identities = 77/94 (82%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311
|||||| | | |||||||||||| ||||||| ||||||| || ||||||||||||
Sbjct 4535 TGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACC 4594
Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345
| ||||||| ||||||||||||| ||||||||
Sbjct 4595 CCAGTAGTCCTAGCCGTAAACGATGGATACTAGG 4628
>seq21280
Length=568
Score = 91.5 bits (100), Expect = 4e-16
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 460 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 519
Query 73 GAATTACTGGGCGTAAAGGG 92
|||| | |||||||||||||
Sbjct 520 GAATGATTGGGCGTAAAGGG 539
>seq20200
Length=18404
Score = 73.4 bits (80), Expect = 9e-11
Identities = 87/118 (74%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 22 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 81
|||||| |||||| || |||||||| || | | || ||||||||||||||| | ||
Sbjct 341 CTAACTTTGTGCCAACAATCGCGGTAAGACAGAAGATGCAAGCGTTATCCGGAATGATTG 400
Query 82 GGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACC 139
| | ||||| || || ||||| || |||||| | || ||| | | |||||||||
Sbjct 401 GACATAAAGTGTTAGTTGGTGGCTTTTTAAGTTGGTTGTCAAATCCCAAGGCTCAACC 458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1200504410880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |