Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq50471 188 1e-45
seq40580 188 1e-45
seq18959 147 4e-33
seq28020 138 2e-30
>seq50471
Length=14951
Score = 188 bits (208), Expect = 1e-45
Identities = 152/180 (84%), Gaps = 3/180 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 1979 GGAAGTTTGAGGCAATAACAGGTCTGTGATGTCCTTAGATGTTATGGGCCGCACGCGCGC 2038
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG-GAAGGTCTGGGTAATCTTGTTA 221
|||||||| | ||||||||| || || |||||| ||| || ||||||||| | |
Sbjct 2039 TACACTGATGTATTCAACGAGTTTATAGCCATGGCCGACAAGCTC-AGGTAATCTT-TGA 2096
Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281
|| | ||||| |||||||||| |||||||||| ||| | ||||||||||||| |||||
Sbjct 2097 AATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTTTTCAACGAGGAATTCCTAG 2156
>seq40580
Length=5286
Score = 188 bits (208), Expect = 1e-45
Identities = 152/180 (84%), Gaps = 3/180 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 5242 GGAAGTTTGAGGCAATAACAGGTCTGTGATGTCCTTAGATGTTATGGGCCGCACGCGCGC 5183
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG-GAAGGTCTGGGTAATCTTGTTA 221
|||||||| | ||||||||| || || |||||| ||| || ||||||||| | |
Sbjct 5182 TACACTGATGTATTCAACGAGTTTATAGCCATGGCCGACAAGCTC-AGGTAATCTT-TGA 5125
Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281
|| | ||||| |||||||||| |||||||||| ||| | ||||||||||||| |||||
Sbjct 5124 AATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTTTTCAACGAGGAATTCCTAG 5065
>seq18959
Length=580
Score = 147 bits (162), Expect = 4e-33
Identities = 141/177 (80%), Gaps = 4/177 (2%)
Strand=Plus/Plus
Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124
||| |||||||||||||||||| | ||| ||||| || |||||||||||||||||| |
Sbjct 268 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAAGCC-ATAAAAGTTTGAGGCAATAACAAG 326
Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184
| |||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct 327 TATGTGATGCCCTTAGATGTTCCGGGCCCCACGCGCGCTACACTGATGTATTCAACGAGT 386
Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241
|| ||||| || ||| | | |||||| | | ||| | ||||| |||||||
Sbjct 387 CTATAGTCTTGGTCGACAGGCCCGAGTAATC-TCTGAAATTTCATCGTGATGGGGAT 442
Score = 129 bits (142), Expect = 1e-27
Identities = 99/115 (86%), Gaps = 3/115 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129
||||||||||||||||| | ||| ||||| || |||||||||||||||||| || |||
Sbjct 1 CTTCTTAGAGGGACTATGGCCGCTTAAGCC-ATAAAAGTTTGAGGCAATAACAAGTATGT 59
Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184
||||||||||||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct 60 GATGCCCTTAGATGTTCCGGGCCCCACGCGCGCTACACTGATGTATTCAACGAGT 114
>seq28020
Length=5307
Score = 138 bits (152), Expect = 2e-30
Identities = 87/94 (93%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294
|||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||| ||||
Sbjct 4618 TGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCA 4677
Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| |||||||| |||||||||||||||||||
Sbjct 4678 TCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTA 4711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 945077940480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |