Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq38623 179 1e-42 seq39764 143 9e-32 seq9368 143 9e-32 seq62464 93.3 1e-16 seq24561 80.6 9e-13 >seq38623 Length=4117 Score = 179 bits (198), Expect = 1e-42 Identities = 322/461 (70%), Gaps = 26/461 (6%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 1070 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 1129 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 1130 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 1189 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 1190 AACCAAGATCGGAGATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 1247 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG---TCATTGCGACTTACCAAAC 267 | || | | ||||||||||| |||||||| | |||| || |||||||| | Sbjct 1248 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACC 1307 Query 268 CATTGCAAACTCCGAATGC--GC----ATCAGTTTTACCGCGGGAGTGAGGGCATGGGTG 321 | | ||||||||||| | || ||| || ||| || || ||||| Sbjct 1308 CCAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTAC----AGACAGACTTTTAGGGTG 1363 Query 322 CTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA 381 ||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 1364 CTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATC 1423 Query 382 GCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAGC 439 || ||| || || |||| |||| || | |||| | |||| || ||||||||||| Sbjct 1424 ACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGC 1479 Query 440 AGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||| || ||| |||| |||||| |||||||| ||| || Sbjct 1480 AGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 1519 >seq39764 Length=5682 Score = 143 bits (158), Expect = 9e-32 Identities = 335/495 (68%), Gaps = 38/495 (8%) Strand=Plus/Minus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||||||||||||| ||| |||||||| ||| || ||||||| ||||| ||||||||||| Sbjct 1730 TGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAA 1671 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAG 209 || | | ||| || |||||||||||| |||||| || ||| || || Sbjct 1670 TGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGC----AG 1615 Query 210 TATCAC----CATCG-GGGGTAGAGCACTGTTATGGCTAGGGGGTC-ATTGCGACTTACC 263 | | || |||| |||||| ||||||||| || ||| | | ||| |||| Sbjct 1614 T-TGACTAGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCGG--TACC 1558 Query 264 AAACCATTGCAAACTCCGAATGCGC---ATCAGTTT----TACCGCGGG----------- 305 ||| | |||||||| |||| | || | | || | ||| Sbjct 1557 AAATCGAGGCAAACTCTGAATACTAGATATGACCTCAAAATAACAAGGGTCAAGGTCGGC 1498 Query 306 -AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCT 364 |||||| ||||| | |||| | | | ||||||| || | ||||| | ||||| Sbjct 1497 CAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCT 1438 Query 365 AAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGA 424 |||||||| ||||||| ||| ||| | | || || || | ||| ||||| | |||| Sbjct 1437 AAGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGGGGTGCAGAGACAACCAGGA 1380 Query 425 TGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGT 484 ||| || | |||||||||| | || ||||||||||||| |||||||| ||||| | Sbjct 1379 GGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCT 1321 Query 485 CGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTATATG 544 | ||| || || | |||| |||| ||| ||||||| ||||||| | | ||| Sbjct 1320 CTTGCGCCGAAGATGAACGGG-GCTAAGCGATCTGCCGAAGCTGTGGGAT-GTCAAAATG 1263 Query 545 -ATCGGTAGGGGAGC 558 |||||||||||||| Sbjct 1262 AATCGGTAGGGGAGC 1248 >seq9368 Length=5193 Score = 143 bits (158), Expect = 9e-32 Identities = 335/495 (68%), Gaps = 38/495 (8%) Strand=Plus/Plus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||||||||||||| ||| |||||||| ||| || ||||||| ||||| ||||||||||| Sbjct 4241 TGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAA 4300 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAG 209 || | | ||| || |||||||||||| |||||| || ||| || || Sbjct 4301 TGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGC----AG 4356 Query 210 TATCAC----CATCG-GGGGTAGAGCACTGTTATGGCTAGGGGGTC-ATTGCGACTTACC 263 | | || |||| |||||| ||||||||| || ||| | | ||| |||| Sbjct 4357 T-TGACTAGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCGG--TACC 4413 Query 264 AAACCATTGCAAACTCCGAATGCGC---ATCAGTTT----TACCGCGGG----------- 305 ||| | |||||||| |||| | || | | || | ||| Sbjct 4414 AAATCGAGGCAAACTCTGAATACTAGATATGACCTCAAAATAACAAGGGTCAAGGTCGGC 4473 Query 306 -AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCT 364 |||||| ||||| | |||| | | | ||||||| || | ||||| | ||||| Sbjct 4474 CAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCT 4533 Query 365 AAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGA 424 |||||||| ||||||| ||| ||| | | || || || | ||| ||||| | |||| Sbjct 4534 AAGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGGGGTGCAGAGACAACCAGGA 4591 Query 425 TGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGT 484 ||| || | |||||||||| | || ||||||||||||| |||||||| ||||| | Sbjct 4592 GGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCT 4650 Query 485 CGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTATATG 544 | ||| || || | |||| |||| ||| ||||||| ||||||| | | ||| Sbjct 4651 CTTGCGCCGAAGATGAACGGG-GCTAAGCGATCTGCCGAAGCTGTGGGAT-GTCAAAATG 4708 Query 545 -ATCGGTAGGGGAGC 558 |||||||||||||| Sbjct 4709 AATCGGTAGGGGAGC 4723 >seq62464 Length=4263 Score = 93.3 bits (102), Expect = 1e-16 Identities = 133/186 (72%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| || | | ||| |||| | ||||||| ||||| Sbjct 359 CGAGTCTTCATAGGGCAATTGTCACTACTTATGGACTCGAACCTGGGTGATCTGTCCATG 418 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 | ||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 419 ACTAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 478 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 | |||||| ||||| ||| ||||||| || | | ||| || ||| |||||||| Sbjct 479 A-ACGATGAGTTGTGGTTAGAGGTGAAATGCCACTCGAACCCAGAGCTAGATGGTTCTCC 537 Query 182 CCGAAA 187 |||||| Sbjct 538 CCGAAA 543 >seq24561 Length=945 Score = 80.6 bits (88), Expect = 9e-13 Identities = 106/145 (73%), Gaps = 3/145 (2%) Strand=Plus/Minus Query 336 CGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTA 395 ||||||| || || || ||| | || |||||| ||| || | ||||||| | | Sbjct 748 CGAGAGGGAAACAACCCAGACCACCAACTAAGGTCCCAAAGCGCGTGCTAAGTGGGA--A 691 Query 396 ACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAG 455 | || || ||||| |||| | |||| |||||||| |||||||||| | || |||| Sbjct 690 AGGATGTGGAGTTGCTCTGACAACCAGGAGGTTGGCTTAGAAGCAGCCACCC-TTGAAAG 632 Query 456 AGTGCGTAACAGCTCACTAGTCGAG 480 ||||||||| |||||||| ||| || Sbjct 631 AGTGCGTAATAGCTCACTGGTCAAG 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1685814704640