Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq16110 414 3e-113
seq15893 161 3e-37
seq9783 150 6e-34
seq53810 122 3e-25
seq139382 118 3e-24
seq9193 95.1 4e-17
seq17718 93.3 1e-16
>seq16110
Length=25130
Score = 414 bits (458), Expect = 3e-113
Identities = 272/299 (91%), Gaps = 1/299 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||| ||| ||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 5233 CTCCCACTTATCCTAATCCTCTCAAGTCATTTAACAAAGTCGAACTAGAGTCAAGCTCAA 5292
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||| || |||||||||| |||||| ||||||||| |||| |||| |||||||||||| |
Sbjct 5293 CAGTGTGTTCTTTCCCC-CTGATTTCGCCAAGCCTATTCCTTTGGTTGTGGTTTCGCTGG 5351
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
|||||||| | ||| |||||||||||| |||||||||||||| |||| ||||||||||
Sbjct 5352 ATAGTAGACAAGGATCGTGGGAATCTCGCTAATCCATTCATGCATGTCATTAATTAGATG 5411
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 5412 TTGAGGCCTTCGGCTACCTTTAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 5471
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5472 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 5530
Score = 143 bits (158), Expect = 9e-32
Identities = 170/226 (75%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || | | ||||||||||||||| | || | |||||||||| ||| ||||
Sbjct 4880 CTTTTGTTCCAAACGAGATTTCTGTTCTCGTTCAGCTCATCTTAGGACACATGCATTATC 4939
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||| | || |||||||||| || | ||||||
Sbjct 4940 TTTTAACAGATGTGCCGCCCCAGCCAAACTTCTCATTTGACAATGTCTTCCGCTCGGATC 4999
Query 127 GGCC-CGCGAAG--GACCTTAACGCCAGAAAATGGTCGGTGAAG-ACCAGTTCCGCTTCA 182
| || ||||| |||||| ||| ||| || || | | ||| |||| |||
Sbjct 5000 GACCGACCGAAGTCGACCTTGGGTCCAAAAAGAGG--GGCAACGCCCCACCTCCGAATCA 5057
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC 228
| | ||||||||| ||| ||| ||||||||||||||||| |||
Sbjct 5058 CTAAATAAGTAAAATAACTTTAAAAGTAGTGGTATTTCACTTTCGC 5103
>seq15893
Length=19348
Score = 161 bits (178), Expect = 3e-37
Identities = 89/89 (100%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 447 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11861 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 11802
Query 507 CTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||
Sbjct 11801 CTGGGCAGAAATCACATTGCGTCAACATC 11773
>seq9783
Length=26918
Score = 150 bits (166), Expect = 6e-34
Identities = 83/83 (100%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16923 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 16982
Query 513 AGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||
Sbjct 16983 AGAAATCACATTGCGTCAACATC 17005
>seq53810
Length=2481
Score = 122 bits (134), Expect = 3e-25
Identities = 102/124 (82%), Gaps = 1/124 (1%)
Strand=Plus/Minus
Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233
|||| || || || ||||||||| ||| ||| |||||| |||||||||| ||| |
Sbjct 854 TCCGATTTATAGAATAAGTAAAATAACATTAAAAGTAGTGATATTTCACTTTCGCTGTTT 795
Query 234 CGGCT-CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292
| | ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 794 CCAATTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCAGACTAAAGTCAAGC 735
Query 293 TCAA 296
||||
Sbjct 734 TCAA 731
Score = 122 bits (134), Expect = 3e-25
Identities = 102/124 (82%), Gaps = 1/124 (1%)
Strand=Plus/Minus
Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233
|||| || || || ||||||||| ||| ||| |||||| |||||||||| ||| |
Sbjct 2145 TCCGATTTATAGAATAAGTAAAATAACATTAAAAGTAGTGATATTTCACTTTCGCTGTTT 2086
Query 234 CGGCT-CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292
| | ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2085 CCAATTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCAGACTAAAGTCAAGC 2026
Query 293 TCAA 296
||||
Sbjct 2025 TCAA 2022
>seq139382
Length=277
Score = 118 bits (130), Expect = 3e-24
Identities = 103/128 (80%), Gaps = 5/128 (4%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 177 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 118
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| |
Sbjct 117 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 63
Query 127 GGCCCGCG 134
|| ||||
Sbjct 62 GGGTCGCG 55
>seq9193
Length=13013
Score = 95.1 bits (104), Expect = 4e-17
Identities = 76/89 (85%), Gaps = 2/89 (2%)
Strand=Plus/Minus
Query 209 TAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCACTTATTCTACACCTCTCAAGTCATT 267
|||||||||||||||| ||| | | || |||||||| |||||||||||||||||||
Sbjct 6638 TAGTGGTATTTCACTTTCGCTGTTTCCAACTACCACTTAT-CTACACCTCTCAAGTCATT 6580
Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||| |||||| || |||||||||||||||
Sbjct 6579 TCAAAAAGTCAGATTAGAGTCAAGCTCAA 6551
>seq17718
Length=5865
Score = 93.3 bits (102), Expect = 1e-16
Identities = 88/110 (80%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA-CGGCTCCCACTTA 246
||||||| | ||| ||| ||||||||||||||||| | | || |||| |||||
Sbjct 1405 TAAGTAACATAACATTAAAAGTAGTGGTATTTCACTTTCACTATTTTCGACTCC-ACTTA 1463
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
| |||||||||| |||| |||||||||||| | ||||||||||| |||||
Sbjct 1464 TCCTACACCTCTTAAGTTATTTCACAAAGTTGAACTAGAGTCAAACTCAA 1513
Score = 93.3 bits (102), Expect = 1e-16
Identities = 88/110 (80%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA-CGGCTCCCACTTA 246
||||||| | ||| ||| ||||||||||||||||| | | || |||| |||||
Sbjct 1812 TAAGTAACATAACATTAAAAGTAGTGGTATTTCACTTTCACTATTTTCGACTCC-ACTTA 1870
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
| |||||||||| |||| |||||||||||| | ||||||||||| |||||
Sbjct 1871 TCCTACACCTCTTAAGTTATTTCACAAAGTTGAACTAGAGTCAAACTCAA 1920
Score = 93.3 bits (102), Expect = 1e-16
Identities = 88/110 (80%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA-CGGCTCCCACTTA 246
||||||| | ||| ||| ||||||||||||||||| | | || |||| |||||
Sbjct 3983 TAAGTAACATAACATTAAAAGTAGTGGTATTTCACTTTCACTATTTTCGACTCC-ACTTA 4041
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
| |||||||||| |||| |||||||||||| | ||||||||||| |||||
Sbjct 4042 TCCTACACCTCTTAAGTTATTTCACAAAGTTGAACTAGAGTCAAACTCAA 4091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1631536579680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |