Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq16110 414 3e-113 seq15893 161 3e-37 seq9783 150 6e-34 seq53810 122 3e-25 seq139382 118 3e-24 seq9193 95.1 4e-17 seq17718 93.3 1e-16 >seq16110 Length=25130 Score = 414 bits (458), Expect = 3e-113 Identities = 272/299 (91%), Gaps = 1/299 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| ||| ||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 5233 CTCCCACTTATCCTAATCCTCTCAAGTCATTTAACAAAGTCGAACTAGAGTCAAGCTCAA 5292 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||| || |||||||||| |||||| ||||||||| |||| |||| |||||||||||| | Sbjct 5293 CAGTGTGTTCTTTCCCC-CTGATTTCGCCAAGCCTATTCCTTTGGTTGTGGTTTCGCTGG 5351 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||| | ||| |||||||||||| |||||||||||||| |||| |||||||||| Sbjct 5352 ATAGTAGACAAGGATCGTGGGAATCTCGCTAATCCATTCATGCATGTCATTAATTAGATG 5411 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 5412 TTGAGGCCTTCGGCTACCTTTAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 5471 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5472 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 5530 Score = 143 bits (158), Expect = 9e-32 Identities = 170/226 (75%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || | | ||||||||||||||| | || | |||||||||| ||| |||| Sbjct 4880 CTTTTGTTCCAAACGAGATTTCTGTTCTCGTTCAGCTCATCTTAGGACACATGCATTATC 4939 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||| | || |||||||||| || | |||||| Sbjct 4940 TTTTAACAGATGTGCCGCCCCAGCCAAACTTCTCATTTGACAATGTCTTCCGCTCGGATC 4999 Query 127 GGCC-CGCGAAG--GACCTTAACGCCAGAAAATGGTCGGTGAAG-ACCAGTTCCGCTTCA 182 | || ||||| |||||| ||| ||| || || | | ||| |||| ||| Sbjct 5000 GACCGACCGAAGTCGACCTTGGGTCCAAAAAGAGG--GGCAACGCCCCACCTCCGAATCA 5057 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC 228 | | ||||||||| ||| ||| ||||||||||||||||| ||| Sbjct 5058 CTAAATAAGTAAAATAACTTTAAAAGTAGTGGTATTTCACTTTCGC 5103 >seq15893 Length=19348 Score = 161 bits (178), Expect = 3e-37 Identities = 89/89 (100%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 447 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11861 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 11802 Query 507 CTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||||| Sbjct 11801 CTGGGCAGAAATCACATTGCGTCAACATC 11773 >seq9783 Length=26918 Score = 150 bits (166), Expect = 6e-34 Identities = 83/83 (100%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16923 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 16982 Query 513 AGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||| Sbjct 16983 AGAAATCACATTGCGTCAACATC 17005 >seq53810 Length=2481 Score = 122 bits (134), Expect = 3e-25 Identities = 102/124 (82%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233 |||| || || || ||||||||| ||| ||| |||||| |||||||||| ||| | Sbjct 854 TCCGATTTATAGAATAAGTAAAATAACATTAAAAGTAGTGATATTTCACTTTCGCTGTTT 795 Query 234 CGGCT-CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | | ||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 794 CCAATTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCAGACTAAAGTCAAGC 735 Query 293 TCAA 296 |||| Sbjct 734 TCAA 731 Score = 122 bits (134), Expect = 3e-25 Identities = 102/124 (82%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233 |||| || || || ||||||||| ||| ||| |||||| |||||||||| ||| | Sbjct 2145 TCCGATTTATAGAATAAGTAAAATAACATTAAAAGTAGTGATATTTCACTTTCGCTGTTT 2086 Query 234 CGGCT-CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | | ||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 2085 CCAATTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCAGACTAAAGTCAAGC 2026 Query 293 TCAA 296 |||| Sbjct 2025 TCAA 2022 >seq139382 Length=277 Score = 118 bits (130), Expect = 3e-24 Identities = 103/128 (80%), Gaps = 5/128 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 177 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 118 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| | Sbjct 117 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 63 Query 127 GGCCCGCG 134 || |||| Sbjct 62 GGGTCGCG 55 >seq9193 Length=13013 Score = 95.1 bits (104), Expect = 4e-17 Identities = 76/89 (85%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 209 TAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCACTTATTCTACACCTCTCAAGTCATT 267 |||||||||||||||| ||| | | || |||||||| ||||||||||||||||||| Sbjct 6638 TAGTGGTATTTCACTTTCGCTGTTTCCAACTACCACTTAT-CTACACCTCTCAAGTCATT 6580 Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||| |||||| || ||||||||||||||| Sbjct 6579 TCAAAAAGTCAGATTAGAGTCAAGCTCAA 6551 >seq17718 Length=5865 Score = 93.3 bits (102), Expect = 1e-16 Identities = 88/110 (80%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA-CGGCTCCCACTTA 246 ||||||| | ||| ||| ||||||||||||||||| | | || |||| ||||| Sbjct 1405 TAAGTAACATAACATTAAAAGTAGTGGTATTTCACTTTCACTATTTTCGACTCC-ACTTA 1463 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 | |||||||||| |||| |||||||||||| | ||||||||||| ||||| Sbjct 1464 TCCTACACCTCTTAAGTTATTTCACAAAGTTGAACTAGAGTCAAACTCAA 1513 Score = 93.3 bits (102), Expect = 1e-16 Identities = 88/110 (80%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA-CGGCTCCCACTTA 246 ||||||| | ||| ||| ||||||||||||||||| | | || |||| ||||| Sbjct 1812 TAAGTAACATAACATTAAAAGTAGTGGTATTTCACTTTCACTATTTTCGACTCC-ACTTA 1870 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 | |||||||||| |||| |||||||||||| | ||||||||||| ||||| Sbjct 1871 TCCTACACCTCTTAAGTTATTTCACAAAGTTGAACTAGAGTCAAACTCAA 1920 Score = 93.3 bits (102), Expect = 1e-16 Identities = 88/110 (80%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA-CGGCTCCCACTTA 246 ||||||| | ||| ||| ||||||||||||||||| | | || |||| ||||| Sbjct 3983 TAAGTAACATAACATTAAAAGTAGTGGTATTTCACTTTCACTATTTTCGACTCC-ACTTA 4041 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 | |||||||||| |||| |||||||||||| | ||||||||||| ||||| Sbjct 4042 TCCTACACCTCTTAAGTTATTTCACAAAGTTGAACTAGAGTCAAACTCAA 4091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1631536579680