Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq164506 136 1e-29
seq31780 125 2e-26
seq20863 125 2e-26
>seq164506
Length=386
Score = 136 bits (150), Expect = 1e-29
Identities = 228/322 (71%), Gaps = 6/322 (2%)
Strand=Plus/Plus
Query 1 TCGACTTGTA-AGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGC 59
|||||||||| ||||||||||| |||| | ||| ||| ||||| ||| | | || |
Sbjct 67 TCGACTTGTAGAGTCTCGCAGTTAAGCACACTTATGCCCTTACGCTCTACGATAGGTTTC 126
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
|| | ||||| | ||||| | ||||||||||||| |||||||| ||| |||||||||
Sbjct 127 CATGCTATCTGAGTGTACCTTCGCGCGCCTCCGTTACTTTTTGGGA-GGCGACCGCCCCA 185
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA-TCATGGGCCAAGGTTAGA-TATC 177
|| ||||| |||| ||| || |||| | || || | | | | |||| ||| |||
Sbjct 186 GTCAAACTGCCCATCAGACATTGTCTCTGCGCCGGATTTACGACGCTAGGTGAGACGATC 245
Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237
| | | |||| |||||||||||| | ||||| |||||| | |||
Sbjct 246 AAAT-CCATCAGGGTGGTATTTCAAGTTTGCCTCCATCTGAGCTAGCGCCCAAACTTCAA 304
Query 238 AGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGG- 296
|| ||||||||||||||||||| || | ||| | || | ||| | ||| ||||
Sbjct 305 AGGCTCCCACCTATCCTACACAGACAGATTCGATCGTCAGTGTCAAATTGCAGTAAAGGT 364
Query 297 TCCCGGGGTCTTTTCGTCCTGC 318
|| |||||||||| |||| |||
Sbjct 365 TCACGGGGTCTTTCCGTCTTGC 386
>seq31780
Length=18751
Score = 125 bits (138), Expect = 2e-26
Identities = 176/246 (72%), Gaps = 1/246 (0%)
Strand=Plus/Minus
Query 234 TCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGA 293
|||| | ||||||||||||||||||| | | || || || |||||||| | |
Sbjct 9871 TCATCGCCTCCCACCTATCCTACACATTCAATCAAGGTTGTCACTATAAAGCTATAATTA 9812
Query 294 AGGTCCC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAAT 352
|||| | |||||||| ||| ||| | | ||||||| || | | ||||
Sbjct 9811 AGGTGCATGGGGTCTTACCGTTTAGCCATTGGTACTTCGCATCTTCACAAAGAATTCAAT 9752
Query 353 TTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAA 412
||||| ||| | || ||| ||| ||| ||||||||| ||||||||| |||||| |
Sbjct 9751 TTCACTGGGTCCATGTCAGAGGTAGCGGGGCAGTCGTTACACCATTCGTGTAGGTCGCTA 9692
Query 413 CTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTG 472
|||| |||||||||||||||| ||||||||| |||| |||||| | | ||||| ||
Sbjct 9691 CTTATGCGACAAGGAATTTCGCCACCTTAGGACAGTTAGAGTTACTGCTGTTGTTTATTG 9632
Query 473 GGGCTT 478
|||||
Sbjct 9631 AGGCTT 9626
>seq20863
Length=629
Score = 125 bits (138), Expect = 2e-26
Identities = 84/94 (89%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|||||||| | ||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 470 TCGTTACGTCTTTCGTGCGGGTCGAAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 411
Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479
||||||||||| | ||||||| || ||||||||
Sbjct 410 CGTTATAGTTACGATCGCCGTTCACCGGGGCTTC 377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1698586028160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |