Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq77831 125 2e-26 seq47755 125 2e-26 seq56876 123 5e-26 seq65666 116 8e-24 seq23665 107 4e-21 seq47 93.3 9e-17 >seq77831 Length=5325 Score = 125 bits (138), Expect = 2e-26 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | |||||| ||||| ||||||||| | | ||| |||| || Sbjct 661 AAAAGAAGTTCATGACCCGTAGG-CCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTT 719 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 720 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 779 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 780 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 839 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 840 GCCTCACCAACTAGCTAAT 858 >seq47755 Length=5186 Score = 125 bits (138), Expect = 2e-26 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | |||||| ||||| ||||||||| | | ||| |||| || Sbjct 3637 AAAAGAAGTTCATGACCCGTAGG-CCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTT 3579 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 3578 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 3519 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 3518 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 3459 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 3458 GCCTCACCAACTAGCTAAT 3440 >seq56876 Length=5270 Score = 123 bits (136), Expect = 5e-26 Identities = 194/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| ||||||| |||||||||||| | | ||| || | Sbjct 4992 GGCTGCTGGCACAGAGTTAGTCGATGCTTATTCCTCGGATACCGTCAT-----------T 4944 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| || |||||||||| | | |||||| ||||| ||||||||| Sbjct 4943 GC------TTCTTCTCTGGGAAAAGAAGTTCATGACCCGTAGG-CCTTCTACCTTCACGC 4891 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| || ||||||||||||||| Sbjct 4890 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCATTGCTGCCTCCCGTAG 4831 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 4830 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 4771 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 4770 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 4732 >seq65666 Length=4916 Score = 116 bits (128), Expect = 8e-24 Identities = 118/151 (78%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | | |||| ||||| ||||||||| || | ||| |||| || Sbjct 3046 AAAAGAAGTTCATGACCTGTAGG-CCTTCTACCTTCACGCGACATTGCTCCGTCAGGCTT 2988 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| |||||||||| Sbjct 2987 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGTCGTGTCTCAG 2928 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACC 231 | ||| ||||| || | ||||||| ||||| Sbjct 2927 TCCCAGTGTGGCTGATCATCCTCTC-GAACC 2898 >seq23665 Length=469 Score = 107 bits (118), Expect = 4e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 112 CCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGC 171 ||||||||| | | ||| |||| || |||||||||| || ||||| ||||||||| Sbjct 83 CCTTCACGCGGCATTGCTCCGTCAGGCTTTCGTCCATTGCGGAAAATTCCCCACTGCTGC 142 Query 172 CTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228 ||||||||||||| ||| |||||||||||| ||| ||||| || | ||||||| || Sbjct 143 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGA 199 >seq47 Length=16403 Score = 93.3 bits (102), Expect = 9e-17 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| ||||||||| | | ||| |||| || ||| |||||| || ||||| || Sbjct 1435 CCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCA 1376 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCA 205 |||||||||||||||||||| ||| |||||||||||| ||| Sbjct 1375 CTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 1335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1066405513920