Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq77831 125 2e-26
seq47755 125 2e-26
seq56876 123 5e-26
seq65666 116 8e-24
seq23665 107 4e-21
seq47 93.3 9e-17
>seq77831
Length=5325
Score = 125 bits (138), Expect = 2e-26
Identities = 148/199 (74%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| | | |||||| ||||| ||||||||| | | ||| |||| ||
Sbjct 661 AAAAGAAGTTCATGACCCGTAGG-CCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTT 719
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 720 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 779
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | ||||||| || | ||| ||| | | || ||| || ||
Sbjct 780 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 839
Query 261 ACCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 840 GCCTCACCAACTAGCTAAT 858
>seq47755
Length=5186
Score = 125 bits (138), Expect = 2e-26
Identities = 148/199 (74%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| | | |||||| ||||| ||||||||| | | ||| |||| ||
Sbjct 3637 AAAAGAAGTTCATGACCCGTAGG-CCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTT 3579
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 3578 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 3519
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | ||||||| || | ||| ||| | | || ||| || ||
Sbjct 3518 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 3459
Query 261 ACCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 3458 GCCTCACCAACTAGCTAAT 3440
>seq56876
Length=5270
Score = 123 bits (136), Expect = 5e-26
Identities = 194/279 (70%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| ||||||| |||||||||||| | | ||| || |
Sbjct 4992 GGCTGCTGGCACAGAGTTAGTCGATGCTTATTCCTCGGATACCGTCAT-----------T 4944
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || ||| || |||||||||| | | |||||| ||||| |||||||||
Sbjct 4943 GC------TTCTTCTCTGGGAAAAGAAGTTCATGACCCGTAGG-CCTTCTACCTTCACGC 4891
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| || |||||||||||||||
Sbjct 4890 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCATTGCTGCCTCCCGTAG 4831
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 4830 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 4771
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 4770 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 4732
>seq65666
Length=4916
Score = 116 bits (128), Expect = 8e-24
Identities = 118/151 (78%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| | | | |||| ||||| ||||||||| || | ||| |||| ||
Sbjct 3046 AAAAGAAGTTCATGACCTGTAGG-CCTTCTACCTTCACGCGACATTGCTCCGTCAGGCTT 2988
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||
Sbjct 2987 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGTCGTGTCTCAG 2928
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACC 231
| ||| ||||| || | ||||||| |||||
Sbjct 2927 TCCCAGTGTGGCTGATCATCCTCTC-GAACC 2898
>seq23665
Length=469
Score = 107 bits (118), Expect = 4e-21
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 112 CCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGC 171
||||||||| | | ||| |||| || |||||||||| || ||||| |||||||||
Sbjct 83 CCTTCACGCGGCATTGCTCCGTCAGGCTTTCGTCCATTGCGGAAAATTCCCCACTGCTGC 142
Query 172 CTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228
||||||||||||| ||| |||||||||||| ||| ||||| || | ||||||| ||
Sbjct 143 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGA 199
>seq47
Length=16403
Score = 93.3 bits (102), Expect = 9e-17
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| ||||||||| | | ||| |||| || ||| |||||| || ||||| ||
Sbjct 1435 CCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCA 1376
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCA 205
|||||||||||||||||||| ||| |||||||||||| |||
Sbjct 1375 CTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 1335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1066405513920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |