Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq41774 78.8 2e-12 seq38553 78.8 2e-12 seq16110 75.2 2e-11 seq2355 75.2 2e-11 >seq41774 Length=20669 Score = 78.8 bits (86), Expect = 2e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117 |||| |||||||||||| | | ||||||||| |||||||||||||||||||||||| | Sbjct 769 AGTGACGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGG 828 Query 118 CCAGAA 123 | |||| Sbjct 829 CTAGAA 834 >seq38553 Length=20244 Score = 78.8 bits (86), Expect = 2e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117 |||| |||||||||||| | | ||||||||| |||||||||||||||||||||||| | Sbjct 350 AGTGACGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGG 409 Query 118 CCAGAA 123 | |||| Sbjct 410 CTAGAA 415 >seq16110 Length=25130 Score = 75.2 bits (82), Expect = 2e-11 Identities = 92/123 (75%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||| || || |||| | ||||||| | ||| || ||| || || Sbjct 4558 GTACGAGAGGAAGCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCTTGT 4501 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||||| | | | |||||| |||||||||||||||||||||||| || | Sbjct 4500 GGCACGAAGCTACCGTGCGTTAAATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 4441 Query 121 GAA 123 ||| Sbjct 4440 GAA 4438 >seq2355 Length=22337 Score = 75.2 bits (82), Expect = 2e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88 ||||||| | ||| || ||| || ||||| |||||||||||| | | |||||||| Sbjct 19250 AATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGTTGGATTAT 19191 Query 89 GGCTGAACGCCTCTAAGTCAG 109 | ||||||||||||||||||| Sbjct 19190 GACTGAACGCCTCTAAGTCAG 19170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817422058240