Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq41774 78.8 2e-12
seq38553 78.8 2e-12
seq16110 75.2 2e-11
seq2355 75.2 2e-11
>seq41774
Length=20669
Score = 78.8 bits (86), Expect = 2e-12
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117
|||| |||||||||||| | | ||||||||| |||||||||||||||||||||||| |
Sbjct 769 AGTGACGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGG 828
Query 118 CCAGAA 123
| ||||
Sbjct 829 CTAGAA 834
>seq38553
Length=20244
Score = 78.8 bits (86), Expect = 2e-12
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117
|||| |||||||||||| | | ||||||||| |||||||||||||||||||||||| |
Sbjct 350 AGTGACGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGG 409
Query 118 CCAGAA 123
| ||||
Sbjct 410 CTAGAA 415
>seq16110
Length=25130
Score = 75.2 bits (82), Expect = 2e-11
Identities = 92/123 (75%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||| || || |||| | ||||||| | ||| || ||| || ||
Sbjct 4558 GTACGAGAGGAAGCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCTTGT 4501
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| | |||||||||| | | | |||||| |||||||||||||||||||||||| || |
Sbjct 4500 GGCACGAAGCTACCGTGCGTTAAATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 4441
Query 121 GAA 123
|||
Sbjct 4440 GAA 4438
>seq2355
Length=22337
Score = 75.2 bits (82), Expect = 2e-11
Identities = 65/81 (80%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88
||||||| | ||| || ||| || ||||| |||||||||||| | | ||||||||
Sbjct 19250 AATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGTTGGATTAT 19191
Query 89 GGCTGAACGCCTCTAAGTCAG 109
| |||||||||||||||||||
Sbjct 19190 GACTGAACGCCTCTAAGTCAG 19170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 817422058240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |