Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_016654.1 Length=39474 Score E Sequences producing significant alignments: (Bits) Value seq21506 131 4e-26 >seq21506 Length=5703 Score = 131 bits (144), Expect = 4e-26 Identities = 135/174 (78%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 12196 GGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCGGCCGGTGCTGCCG-TCGCCAA 12254 |||||||| || ||||||||| |||| | ||||| | ||| ||||||| | || || Sbjct 5335 GGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGG-GCTGCCGGTGGCGAA 5277 Query 12255 CTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCAGGCGAACGAGTGGAAGGACGG 12314 ||||||| |||| || ||||| |||| |||||| |||||||||||||||||||| Sbjct 5276 CTTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCGCGAACGAGTGGAAGGACGG 5217 Query 12315 GGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGCCGCCGAGAACGTCGC 12368 || ||||||||| | ||| | ||||||||||||| ||||||| |||| || Sbjct 5216 CGAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGC 5163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125859468318120