Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_031108.1 Length=39640 Score E Sequences producing significant alignments: (Bits) Value seq21506 196 1e-45 >seq21506 Length=5703 Score = 196 bits (216), Expect = 1e-45 Identities = 181/226 (80%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 36446 GTGGGCAACCTCACCGCCGACCCCGAACTGCGATATAC-CAATTCGGGCATTGCCG-TCG 36503 |||||||||||||||||||||||||| ||||| || || || ||||| ||||| | | Sbjct 5338 GTGGGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGGGC--TGCCGGTGG 5281 Query 36504 CCAACTTCACCGTCGCATCCACACCACGCACATTCGACCGGCAAGCCAACGAATGGAAGG 36563 | ||||||||| ||||||| || || |||| |||||||| || ||||| ||||||| Sbjct 5280 CGAACTTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCGCGAACGAGTGGAAGG 5221 Query 36564 ACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCAGCCGGCCGAGAACGTGGCCG 36623 ||||||| || |||||||| | | ||||||||||||| || |||||| ||||||| | Sbjct 5220 ACGGCGAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGCGG 5161 Query 36624 AATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACGTCTCCG 36669 ||||| ||||||||||||| ||||||| ||||| ||||| || Sbjct 5160 GCTCGCTCACCAAGGGCATGCGCGTGATCGCGCAGGGTCGTCTGCG 5115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126389255105340