Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq80997 197 2e-45 seq95291 174 2e-38 seq13836 129 6e-25 seq78999 118 1e-21 seq152218 114 1e-20 seq32149 114 1e-20 >seq80997 Length=4773 Score = 197 bits (218), Expect = 2e-45 Identities = 308/438 (70%), Gaps = 2/438 (0%) Strand=Plus/Plus Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862 ||||| | ||| |||| ||| | || || || || | || ||||| || || || Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395 Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921 ||||| || ||| | ||| | |||||| |||| || || |||| || |||||||| || Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454 Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981 || || || || ||||| || ||||| || || |||| || || | || || ||||| Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514 Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041 ||||| |||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574 Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101 |||||||| || || | || |||||| | || ||||| ||||||| |||| | || Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634 Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161 | |||||| | | || | | ||| |||||||||||||||||||| || || Sbjct 4635 TCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 4694 Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221 ||| ||||||||||| ||||| ||||||||| | |||| || | || ||| || | Sbjct 4695 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTAC 4754 Query 160222 TGTATTCCTCGTCTACCC 160239 ||| ||| | |||| || Sbjct 4755 TGTTTTCTTGATCTATCC 4772 >seq95291 Length=6073 Score = 174 bits (192), Expect = 2e-38 Identities = 256/360 (71%), Gaps = 2/360 (1%) Strand=Plus/Minus Query 159845 GGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGT 159903 || ||||| | || ||||||| || ||| | ||| | |||| | |||| || || | Sbjct 6019 GGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTAT 5961 Query 159904 CGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTC 159963 ||| || |||||||| || || || || || ||||| || ||||| | || |||| || Sbjct 5960 CGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATC 5901 Query 159964 ACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGG 160023 || | || || ||||| ||||| | |||||| || |||| |||| || || || Sbjct 5900 TCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGG 5841 Query 160024 TCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGG 160083 | | || || ||||| || |||||||| || || | || |||||| | || ||||| || Sbjct 5840 TTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGG 5781 Query 160084 TCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGA 160143 ||||| |||| | || | |||||| | | || | | ||| ||||||||||| Sbjct 5780 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGA 5721 Query 160144 GTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCC 160203 ||||||||| || ||||| ||||||||||| ||||| ||||||||| || ||||| Sbjct 5720 GTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 5661 >seq13836 Length=10167 Score = 129 bits (142), Expect = 6e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 161794 GGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCATGCTT 161853 || || || |||| |||||| || |||||||| ||||||| | || || |||||| | Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529 Query 161854 CGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTATTGCTTTCTC 161912 ||||| |||||||||||||| ||| || | | || ||||| ||||| | || ||||| Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAACCGCATTCTC 4588 Query 161913 TGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGTCCTG 161972 ||||| |||||||||||||| || || || || ||||| ||||| ||||| || Sbjct 4589 AGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTG 4648 Query 161973 GTTCTTCGCGCCA 161985 |||||| || ||| Sbjct 4649 GTTCTTTGCTCCA 4661 >seq78999 Length=659 Score = 118 bits (130), Expect = 1e-21 Identities = 206/296 (70%), Gaps = 8/296 (3%) Strand=Plus/Minus Query 162220 AACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTC 162279 || || || |||||| | ||||| ||||||| ||||| ||||||| | || | Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTT-C 263 Query 162280 TTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTC 162339 | |||| | || || || || | ||| | ||| | | || | || | || | | Sbjct 262 TGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTG 203 Query 162340 GCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCT 162399 || || || || |||||||| |||||||| ||| | || ||||||| ||| || |||||| Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143 Query 162400 GAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTG 162459 | ||||| || ||||||||||| | ||| |||| || |||||| |||||| ||| || Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATG 84 Query 162460 GCACCAGTT---GATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCC 162512 | |||| ||| | | ||||| ||| || ||||| || | || ||||| || Sbjct 83 G---GAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACC 31 >seq152218 Length=324 Score = 114 bits (126), Expect = 1e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 160960 GATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGT 161019 ||| || |||| | ||||| ||||| || || ||| |||| |||||||| || Sbjct 286 GATAATGAATACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGC 227 Query 161020 CGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCT 161079 | ||||||||||||||| | ||| |||| || ||| |||||| || || || || || Sbjct 226 AGGGCTGGTGCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCA 167 Query 161080 GATCAATCT-TTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGC 161138 || |||| ||||| ||||| || ||| | | ||||||||| || ||||||||||| Sbjct 166 GA-CAATAGCTTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGC 108 Query 161139 TTATCCCACTTCTGA 161153 ||| ||||| ||||| Sbjct 107 TTACCCCACCTCTGA 93 >seq32149 Length=26709 Score = 114 bits (126), Expect = 1e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 160960 GATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGT 161019 ||| || |||| | ||||| ||||| || || ||| |||| |||||||| || Sbjct 21047 GATAATGAATACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGC 20988 Query 161020 CGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCT 161079 | ||||||||||||||| | ||| |||| || ||| |||||| || || || || || Sbjct 20987 AGGGCTGGTGCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCA 20928 Query 161080 GATCAATCT-TTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGC 161138 || |||| ||||| ||||| || ||| | | ||||||||| || ||||||||||| Sbjct 20927 GA-CAATAGCTTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGC 20869 Query 161139 TTATCCCACTTCTGA 161153 ||| ||||| ||||| Sbjct 20868 TTACCCCACCTCTGA 20854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549831905973000