Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_031903.1
Length=172345
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 197 2e-45
seq95291 174 2e-38
seq13836 129 6e-25
seq78999 118 1e-21
seq152218 114 1e-20
seq32149 114 1e-20
>seq80997
Length=4773
Score = 197 bits (218), Expect = 2e-45
Identities = 308/438 (70%), Gaps = 2/438 (0%)
Strand=Plus/Plus
Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862
||||| | ||| |||| ||| | || || || || | || ||||| || || ||
Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395
Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921
||||| || ||| | ||| | |||||| |||| || || |||| || |||||||| ||
Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4454
Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981
|| || || || ||||| || ||||| || || |||| || || | || || |||||
Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514
Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041
||||| |||||||| || |||| |||| || || ||| | || || ||||| ||
Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574
Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101
|||||||| || || | || |||||| | || ||||| ||||||| |||| | ||
Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634
Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161
| |||||| | | || | | ||| |||||||||||||||||||| || ||
Sbjct 4635 TCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 4694
Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221
||| ||||||||||| ||||| ||||||||| | |||| || | || ||| || |
Sbjct 4695 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTAC 4754
Query 160222 TGTATTCCTCGTCTACCC 160239
||| ||| | |||| ||
Sbjct 4755 TGTTTTCTTGATCTATCC 4772
>seq95291
Length=6073
Score = 174 bits (192), Expect = 2e-38
Identities = 256/360 (71%), Gaps = 2/360 (1%)
Strand=Plus/Minus
Query 159845 GGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGT 159903
|| ||||| | || ||||||| || ||| | ||| | |||| | |||| || || |
Sbjct 6019 GGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTAT 5961
Query 159904 CGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTC 159963
||| || |||||||| || || || || || ||||| || ||||| | || |||| ||
Sbjct 5960 CGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATC 5901
Query 159964 ACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGG 160023
|| | || || ||||| ||||| | |||||| || |||| |||| || || ||
Sbjct 5900 TCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGG 5841
Query 160024 TCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGG 160083
| | || || ||||| || |||||||| || || | || |||||| | || ||||| ||
Sbjct 5840 TTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGG 5781
Query 160084 TCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGA 160143
||||| |||| | || | |||||| | | || | | ||| |||||||||||
Sbjct 5780 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGA 5721
Query 160144 GTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCC 160203
||||||||| || ||||| ||||||||||| ||||| ||||||||| || |||||
Sbjct 5720 GTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 5661
>seq13836
Length=10167
Score = 129 bits (142), Expect = 6e-25
Identities = 146/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 161794 GGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCATGCTT 161853
|| || || |||| |||||| || |||||||| ||||||| | || || |||||| |
Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529
Query 161854 CGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTATTGCTTTCTC 161912
||||| |||||||||||||| ||| || | | || ||||| ||||| | || |||||
Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAACCGCATTCTC 4588
Query 161913 TGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGTCCTG 161972
||||| |||||||||||||| || || || || ||||| ||||| ||||| ||
Sbjct 4589 AGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTG 4648
Query 161973 GTTCTTCGCGCCA 161985
|||||| || |||
Sbjct 4649 GTTCTTTGCTCCA 4661
>seq78999
Length=659
Score = 118 bits (130), Expect = 1e-21
Identities = 206/296 (70%), Gaps = 8/296 (3%)
Strand=Plus/Minus
Query 162220 AACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTC 162279
|| || || |||||| | ||||| ||||||| ||||| ||||||| | || |
Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTT-C 263
Query 162280 TTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTC 162339
| |||| | || || || || | ||| | ||| | | || | || | || | |
Sbjct 262 TGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTG 203
Query 162340 GCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCT 162399
|| || || || |||||||| |||||||| ||| | || ||||||| ||| || ||||||
Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143
Query 162400 GAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTG 162459
| ||||| || ||||||||||| | ||| |||| || |||||| |||||| ||| ||
Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATG 84
Query 162460 GCACCAGTT---GATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCC 162512
| |||| ||| | | ||||| ||| || ||||| || | || ||||| ||
Sbjct 83 G---GAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACC 31
>seq152218
Length=324
Score = 114 bits (126), Expect = 1e-20
Identities = 144/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 160960 GATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGT 161019
||| || |||| | ||||| ||||| || || ||| |||| |||||||| ||
Sbjct 286 GATAATGAATACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGC 227
Query 161020 CGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCT 161079
| ||||||||||||||| | ||| |||| || ||| |||||| || || || || ||
Sbjct 226 AGGGCTGGTGCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCA 167
Query 161080 GATCAATCT-TTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGC 161138
|| |||| ||||| ||||| || ||| | | ||||||||| || |||||||||||
Sbjct 166 GA-CAATAGCTTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGC 108
Query 161139 TTATCCCACTTCTGA 161153
||| ||||| |||||
Sbjct 107 TTACCCCACCTCTGA 93
>seq32149
Length=26709
Score = 114 bits (126), Expect = 1e-20
Identities = 144/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 160960 GATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGT 161019
||| || |||| | ||||| ||||| || || ||| |||| |||||||| ||
Sbjct 21047 GATAATGAATACATTCTTGATGCTGCAGAAGATCAAGGGCTTGATCTTCCCTACTCATGC 20988
Query 161020 CGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCT 161079
| ||||||||||||||| | ||| |||| || ||| |||||| || || || || ||
Sbjct 20987 AGGGCTGGTGCTTGCTCTTCCTGTACTGGAAAAGTTGTGAGTGGCACAGTGGACCAGTCA 20928
Query 161080 GATCAATCT-TTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGC 161138
|| |||| ||||| ||||| || ||| | | ||||||||| || |||||||||||
Sbjct 20927 GA-CAATAGCTTCCTTGATGACGACCAAATCGGTCTAGGATTTGTTCTCACCTGCGTTGC 20869
Query 161139 TTATCCCACTTCTGA 161153
||| ||||| |||||
Sbjct 20868 TTACCCCACCTCTGA 20854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 549831905973000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |