Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_031927.1
Length=216121
Score E
Sequences producing significant alignments: (Bits) Value
seq167485 95.1 2e-14
seq38608 95.1 2e-14
>seq167485
Length=405
Score = 95.1 bits (104), Expect = 2e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 162616 GGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675
|| ||||| ||||||||||| | | ||| | || |||| ||||| || |||||||||
Sbjct 32 GGCATTCTTTTCAATCACGAGTCCCCTCGCCGCGGTGAGAATTTCGTGACGCGCAAGATC 91
Query 162676 GTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTC 162735
|| ||| || ||| || | ||||| ||||||| | || | || |||||
Sbjct 92 ACTCGGGCCGTGGGCCGGATCAAGGTGGGGCTCCAAAACAAGCTCTTTTTGGGGAACCTA 151
Query 162736 AATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTT 162795
| ||| | || ||||| ||| ||||| || || || |||||| |||||||
Sbjct 152 CAGGCCTCCAGGGATTGGGGCTTCGCTGGGGACTATGTTGAAGCCATGTGGCTGATGCTG 211
Query 162796 CAGCAAGAGAAGCCAGATGATTATGTGATCGCAAC 162830
||||| |||||||| ||||| ||||| |||| ||
Sbjct 212 CAGCAGGAGAAGCCCGATGACTATGTTGTCGCCAC 246
>seq38608
Length=5830
Score = 95.1 bits (104), Expect = 2e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 162616 GGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675
|| ||||| ||||||||||| | | ||| | || |||| ||||| || |||||||||
Sbjct 4542 GGCATTCTTTTCAATCACGAGTCCCCTCGCCGCGGTGAGAATTTCGTGACGCGCAAGATC 4483
Query 162676 GTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTC 162735
|| ||| || ||| || | ||||| ||||||| | || | || |||||
Sbjct 4482 ACTCGGGCCGTGGGCCGGATCAAGGTGGGGCTCCAAAACAAGCTCTTTTTGGGGAACCTA 4423
Query 162736 AATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTT 162795
| ||| | || ||||| ||| ||||| || || || |||||| |||||||
Sbjct 4422 CAGGCCTCCAGGGATTGGGGCTTCGCTGGGGACTATGTTGAAGCCATGTGGCTGATGCTG 4363
Query 162796 CAGCAAGAGAAGCCAGATGATTATGTGATCGCAAC 162830
||||| |||||||| ||||| ||||| |||| ||
Sbjct 4362 CAGCAGGAGAAGCCCGATGACTATGTTGTCGCCAC 4328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 689522811726600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |