Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq146862 273 3e-71 seq719308 253 3e-65 seq316412 232 1e-58 seq537996 165 1e-38 seq149012 165 1e-38 seq754931 152 8e-35 seq377046 152 8e-35 seq248080 141 1e-31 seq446937 132 7e-29 seq720387 129 9e-28 seq57738 123 4e-26 seq291359 118 2e-24 seq37760 118 2e-24 seq679955 116 6e-24 seq55130 93.3 6e-17 >seq146862 Length=348 Score = 273 bits (302), Expect = 3e-71 Identities = 188/210 (90%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 47 TTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGA 106 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 348 TTACTAGGAATT-CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCATAATGA 290 Query 107 AATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTG 166 ||||||||||||||| ||| ||| |||||||||| ||||| |||||||||||||||||| Sbjct 289 AATTTCAAAGATTACTCGGGCCTATCGGCCAAGGCTATAGATTCGTTGAATACATCAGTG 230 Query 167 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 226 ||| ||||||||| ||| ||||||||||| |||||||||||||||||||||| |||||| Sbjct 229 TAGTGCGCGTGCGATCCAAAACATCTAAGGACATCACAGACCTGTTATTGCCTAAAACTT 170 Query 227 CCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255 || | |||||| |||||| |||||| || Sbjct 169 CCTTAGCCTAAGTGGCCATAGTCCCTCTAA 140 >seq719308 Length=1748 Score = 253 bits (280), Expect = 3e-65 Identities = 200/236 (85%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 21 GTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATT 80 |||||| || | ||||||| | | ||||||||||||| |||||||||||||||| |||| Sbjct 1124 GTCAACACGGG-TTGATGAGTTGTCCTTACTAGGAATT-CCTCGTTGAAGACCAATAATT 1067 Query 81 GCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGG 140 |||||||||||| ||||||| |||||||||||||||||||| ||| | ||| ||||| Sbjct 1066 GCAATGATCTATTCCCATCATGATGAAATTTCAAAGATTACTCGGGTTTTTCGATCAAGG 1007 Query 141 TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCAT 200 |||||||| |||||||||| ||||||| ||| ||| | |||||||||||||||||||| Sbjct 1006 CTATAGACTCATTGAATACATTAGTGTAGTGCGTGTGTGACCCAGAACATCTAAGGGCAT 947 Query 201 CACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255 |||| || |||||||||||||| ||||| |||||||| ||| || |||||| || Sbjct 946 CACAAACTTGTTATTGCCTCAATCTTCCTTGGCCTAAGCGGCTATAGTCCCTCTAA 891 >seq316412 Length=479 Score = 232 bits (256), Expect = 1e-58 Identities = 190/231 (82%), Gaps = 15/231 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| | ||||||||||| ||||| |||||||||||||| ||||||||| | Sbjct 216 GTACAAAGGGTAAAAACGTAGTCAACATGAGCT-GATGACTCGCGCTTGCTAGGAATT-C 159 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct 158 CTTGTTGAAGACCAACAATTGTAATGATCTATCCCCATCATGATGAAATTTCAAAGATTA 99 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||| |||||| |||| ||||||||||| | |||||| || || || Sbjct 98 CCCGAGCCTGTC-------------AACTCATTGAATACATCTGCGTAGCGTGCCTGTGG 52 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 || |||| |||||||||||||| | |||||||| ||||| |||||||| || Sbjct 51 CCTAGAATATCTAAGGGCATCATAAACCTGTTACTGCCTTAAACTTCCTTG 1 >seq537996 Length=271 Score = 165 bits (182), Expect = 1e-38 Identities = 107/115 (93%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||| |||| |||||| |||| |||||||||| ||||||||||||| | Sbjct 113 GTACAAAGGGCAGGGATGTAGCCAACGCAAGCT-GATGACTCGCACTTACTAGGAATT-C 56 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA 115 || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 55 ATCATTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA 1 >seq149012 Length=479 Score = 165 bits (182), Expect = 1e-38 Identities = 125/146 (86%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 92 TCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCG 151 ||||||||| ||||||||||||||||||||| | ||| | |||||| | |||||| Sbjct 238 TCCCCATCATAATGAAATTTCAAAGATTACCCAAGCTTGTTAGTCAAGGTTACAGACTCA 297 Query 152 TTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGT 211 |||||||||| ||||||||| || || ||||| |||||||||||||||| |||||||| Sbjct 298 TTGAATACATTAGTGTAGCGTGCATG-TGCCCAAAACATCTAAGGGCATCGTAGACCTGT 356 Query 212 TATTGCCTCAAACTTCCGTGGCCTAA 237 ||||||||||||||||| |||||||| Sbjct 357 TATTGCCTCAAACTTCCTTGGCCTAA 382 >seq754931 Length=472 Score = 152 bits (168), Expect = 8e-35 Identities = 121/144 (84%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 234 CCCATCACAGTGAAATTTCAAAGATTACCCGGACCTGTCAATCAAGGTTATAGACTCGTT 175 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 | |||||| |||||| || | || | | | ||||||||||||||||||| |||| ||| Sbjct 174 GCATACATTAGTGTAATGCACATG-TGTCTAAAACATCTAAGGGCATCACAAACCTATTA 116 Query 214 TTGCCTCAAACTTCCGTGGCCTAA 237 | |||||||||| | |||||||| Sbjct 115 TCACCTCAAACTTTCTTGGCCTAA 92 >seq377046 Length=383 Score = 152 bits (168), Expect = 8e-35 Identities = 108/121 (89%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| |||||| | ||||||||| ||| ||||| |||||| |||||||||||||||| | Sbjct 265 GTATAAAGGGTAAGGACGTAGTTAACATGAGCTA-ATGACTAGCGCTTACTAGGAATT-C 322 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 323 CTTGTTAAAGACCAACAATTGCAATGATCTATCCCCATCATGATGAAATTTCAAAGATTA 382 Query 121 C 121 | Sbjct 383 C 383 >seq248080 Length=320 Score = 141 bits (156), Expect = 1e-31 Identities = 112/133 (84%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||| ||| ||||||||||||||||||| |||||||||| |||||| |||||||| || Sbjct 189 CCCACCACAATGAAATTTCAAAGATTACTCGGACCTGTCAATCAAGGTTATAGACTCATT 248 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 |||||||| | |||| ||| | || ||| | |||||||||||||||||||||| | ||| Sbjct 249 GAATACATTAATGTAACGCACATG-TGCCTAAAACATCTAAGGGCATCACAGACATATTA 307 Query 214 TTGCCTCAAACTT 226 | |||||||||| Sbjct 308 TCACCTCAAACTT 320 >seq446937 Length=1812 Score = 132 bits (146), Expect = 7e-29 Identities = 85/90 (94%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| | Sbjct 1725 GTACAAAGGGCAGGGACGTAGTCAACGCAAGCTC-ATGACTCGTGCTTACTAGGAATT-C 1782 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCT 90 |||||||||||||||||||||||||||||| Sbjct 1783 CTCGTTGAAGACCAACAATTGCAATGATCT 1812 >seq720387 Length=1934 Score = 129 bits (142), Expect = 9e-28 Identities = 168/238 (71%), Gaps = 32/238 (13%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| || | |||||||||||||| |||| |||| ||| | |||||||||||| | Sbjct 1051 GTACAAAAGGTAAGGACGTAGTCAACGTAAGCT-GATGGCTCATGTTTACTAGGAATT-C 994 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || ||||||||||||||||||||| |||||| Sbjct 993 CTTGTTGAAGACCAACAATTGCAA------------------------------AGATTA 964 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 | | | |||| ||||| ||| ||||||||||||||||| |||| | | | ||| Sbjct 963 CTTTGGCTTGTCAACCAAGACTATAAACTCGTTGAATACATCAATGTAACACACATGCAA 904 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238 ||| |||||||||| |||| | |||||||||||||| ||||| |||| | |||||| Sbjct 903 TCCAAAACATCTAAGAGCATTATAGACCTGTTATTGCTTCAAATTTCCTTCACCTAAA 846 >seq57738 Length=295 Score = 123 bits (136), Expect = 4e-26 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||| Sbjct 83 GTACAAAGGGTAGGGACGTAGTCAACGCAAGC-TGATGACTCGCGCTTACTAGGAA-TTC 26 Query 61 CTCGTTGAAGACCAACAATTGCAAT 85 |||||||||||||||||||||||| Sbjct 25 ATCGTTGAAGACCAACAATTGCAAT 1 >seq291359 Length=243 Score = 118 bits (130), Expect = 2e-24 Identities = 111/140 (79%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 87 ATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAG 146 |||| |||| || | ||||||||||||||| || |||| | ||| | ||||| |||| Sbjct 8 ATCT-TCCCTATTGCAATGAAATTTCAAAGACTAACCGGGCTTGTTGACCAAGACTATAG 66 Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 || |||||||||||| |||||| | |||||| ||| ||||| ||| ||||||||| | Sbjct 67 GTTCATTGAATACATCAATGTAGCATGTGTGCGGTCCAAAACATGTAAAGGCATCACAAA 126 Query 207 CCTGTTATTGCCTCAAACTT 226 |||| | || |||||||||| Sbjct 127 CCTGATCTTACCTCAAACTT 146 >seq37760 Length=331 Score = 118 bits (130), Expect = 2e-24 Identities = 133/174 (76%), Gaps = 7/174 (4%) Strand=Plus/Minus Query 87 ATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAG 146 |||| |||| || | ||||||||||||||| || |||| | ||| | ||||| |||| Sbjct 324 ATCT-TCCCTATTGCAATGAAATTTCAAAGACTAACCGGGCTTGTTGATCAAGGCTATAG 266 Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGG----GCATCA 202 || |||||||||||| |||||| | |||||| ||||||||| ||| | | |||| Sbjct 265 GTTCATTGAATACATCACTGTAGCATGTGTGCGGTCCAGAACATGTAAAGGTTTGTATCA 206 Query 203 CAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255 || ||||| ||||||||||||||| | | |||||| |||| |||||| || Sbjct 205 CAAACCTGATATTGCCTCAAACTTTCAT-TCCTAAACCACCATATTCCCTCTAA 153 >seq679955 Length=3909 Score = 116 bits (128), Expect = 6e-24 Identities = 101/124 (81%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 46 CTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATG 105 |||| |||||||| | || || ||||||||| |||| ||| ||||||||| ||||||||| Sbjct 756 CTTATTAGGAATT-CTTCATTAAAGACCAACGATTGTAATTATCTATCCCTATCACGATG 814 Query 106 AAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGT 165 ||||||||||||||| ||| | | ||||| ||| ||| | | |||||||| |||| | Sbjct 815 AAATTTCAAAGATTATCCGAATCCGTCGGTGAAGACTATATATTTGTTGAATAAATCAAT 874 Query 166 GTAG 169 |||| Sbjct 875 GTAG 878 >seq55130 Length=403 Score = 93.3 bits (102), Expect = 6e-17 Identities = 53/54 (98%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 173 GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 226 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 GCGTGCGGTCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 746491629375