Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq609225 206 1e-51 seq582765 86.0 3e-15 >seq609225 Length=598 Score = 206 bits (228), Expect = 1e-51 Identities = 116/117 (99%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 115 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 116 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 172 >seq582765 Length=2632 Score = 86.0 bits (94), Expect = 3e-15 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 5 CCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCCCGAT 63 ||||| ||||||||||||| ||||||||| |||| |||| || |||||| ||| Sbjct 2632 CCAAAAACTTTGATTTCTCATAAGGTGCC-AGCGAAGTCCTAAAAGCAACATCCGTTGAT 2574 Query 64 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || | |||||||| ||||| |||| |||||| || | ||||||| || ||||| Sbjct 2573 CCTTGGTCGGCATCGTTTATGGTTGAGACTAGGATGACATCTGATAGTTTTCGA 2520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276426513750