Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17]
756,125 sequences; 432,755,284 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq609225 206 1e-51
seq582765 86.0 3e-15
>seq609225
Length=598
Score = 206 bits (228), Expect = 1e-51
Identities = 116/117 (99%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 56 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 115
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 116 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 172
>seq582765
Length=2632
Score = 86.0 bits (94), Expect = 3e-15
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 5 CCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCCCGAT 63
||||| ||||||||||||| ||||||||| |||| |||| || |||||| |||
Sbjct 2632 CCAAAAACTTTGATTTCTCATAAGGTGCC-AGCGAAGTCCTAAAAGCAACATCCGTTGAT 2574
Query 64 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|| | |||||||| ||||| |||| |||||| || | ||||||| || |||||
Sbjct 2573 CCTTGGTCGGCATCGTTTATGGTTGAGACTAGGATGACATCTGATAGTTTTCGA 2520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276426513750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |