Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq609225 526 4e-147 seq582765 147 4e-33 seq513 143 5e-32 seq53425 127 4e-27 seq699190 113 8e-23 seq495358 100 5e-19 seq232026 91.5 3e-16 seq135204 77.0 6e-12 >seq609225 Length=598 Score = 526 bits (582), Expect = 4e-147 Identities = 305/314 (97%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| Sbjct 487 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGCGTGTCGGGGA 428 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 427 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 368 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 367 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 308 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 307 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 248 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 247 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 188 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 187 ACGAAAGTTAGGGG 174 >seq582765 Length=2632 Score = 147 bits (162), Expect = 4e-33 Identities = 165/214 (77%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 107 GCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGT 165 |||| ||||| | |||||||| ||||| |||| | |||||| | ||| ||||| ||| Sbjct 2308 GCCTATGCTCTGGATACATTAACATGGGATAACATCATAGGATTTT-GGTCCTATTATGT 2366 Query 166 TGGT-TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATT 224 | | ||| || | || ||||||||||||| | ||||| ||| | ||||| || Sbjct 2367 TAGCCTTCGAG-ATCGGAGTAATGATTAATAAGAATAGTTAAGGGCATTTGTATTTCATA 2425 Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 |||| || ||||||| |||||||||| ||||| ||| ||| ||||||| || |||||| Sbjct 2426 GTCAAAGATGAAATTTTTGGATTTATGAAAGACAAACAACTACGAAAGCATTTTCCAAGG 2485 Query 285 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||| ||| ||||||| |||| Sbjct 2486 ATGTTTTCATTAATCA-AGAATGAAAGTTGGGGG 2518 >seq513 Length=497 Score = 143 bits (158), Expect = 5e-32 Identities = 145/186 (78%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || ||||||| || ||||||||||| |||||||| |||| ||||| |||||||||||||| Sbjct 306 CTGTTACTTTTAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGAATACATTAGCAT 365 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || ||| | ||| || | ||| |||| |||||| | | ||| | |||||||| Sbjct 366 GGGATAGCATCATATGATTTT-GGTCATATTCTGTTGGCCTTTGGGATCATAGTAATGAT 424 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||| |||| |||| || | ||||| || |||||||||||||||||||||||||| Sbjct 425 TAATAAGGATGGTCGAGGACATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 484 Query 251 TGAAGA 256 |||| Sbjct 485 GAAAGA 490 >seq53425 Length=554 Score = 127 bits (140), Expect = 4e-27 Identities = 148/197 (75%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || ||||||| || ||||||||||| |||||||| |||| |||| |||||||||||||| Sbjct 249 CTATTACTTTTAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGAATACATTAGCAT 190 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 | ||| | ||| || | | | |||| |||||| | | ||| | |||||||| Sbjct 189 AGGATAGCATCATATGATTTTTG-TCATATTCTGTTGGCCTTTGGGATCATAGTAATGAT 131 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||| |||| ||| || | |||| || |||||||| ||||||||||||||||| Sbjct 130 TAATAAGGATGGTCAGGAACATTCATATTTCATAGTCAGAGGAGAAATTCTTGGATTTAT 71 Query 251 TGAAGACTAACTACTGC 267 ||||| ||| ||||| Sbjct 70 GAAAGACGAACAACTGC 54 >seq699190 Length=622 Score = 113 bits (124), Expect = 8e-23 Identities = 130/169 (77%), Gaps = 6/169 (4%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| |||||||||| ||||| || |||| ||||| | ||||||||||||||| Sbjct 167 TTACTTTGAAGAAATTAGAGTACTCAAAACAAGCCTATGCTCTGGATACATTAGCATGGA 108 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG-TTTCTAGGACCGCCGTAATGATTA 192 |||| | |||||| | ||| ||||| ||||| |||| || | | |||||||||| Sbjct 107 ATAACATCATAGGATTTT-GGTCCTATTGTGTTGCCTTTCGAGATCAGA-GTAATGATTA 50 Query 193 ATAGGGATAGTCGGGGG--TGTCAGTATTCAATTGTCAGAGGTGAAATT 239 ||||||| ||| ||||| | ||||| || || ||||| ||||| Sbjct 49 ATAGGGACAGTTGGGGGCACATTCGTATTTCATAGTTAGAGGCAAAATT 1 >seq495358 Length=241 Score = 100 bits (110), Expect = 5e-19 Identities = 144/198 (73%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178 ||||||||| | ||||||| | |||||| | |||| ||||| ||||| | |||| Sbjct 239 ATACATTAGAAAGGAATAACATCATAGGATTT-CGGTCCTATTATGTTGACCTTCAGGAT 181 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 || |||||||||| ||| |||| | |||| | ||||| ||| ||| ||| |||| | Sbjct 180 CGAAGTAATGATTATTAGAGATAATTAGGGGCATTTGTATTTAATAGTC-GAGATGAATT 122 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 | | || || || ||||| | ||| ||||| | || ||||| || ||||||||||| Sbjct 121 TTTAGG-TTCATGAAAGACATATAACTACGAAATCATTTTCCAAGAATTTTTTCATTAAT 63 Query 299 CAGTGAACGAAAGTTAGG 316 || ||| |||||| || Sbjct 62 CA-AAAACAAAAGTTGGG 46 >seq232026 Length=423 Score = 91.5 bits (100), Expect = 3e-16 Identities = 97/126 (77%), Gaps = 3/126 (2%) Strand=Plus/Minus Query 188 GATTAATAGGGATAGTCGGGGGTG--TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||| ||| ||||| | ||||| || || ||||| ||||||||||| Sbjct 423 GATTAATAGGGACAGTTGGGGGCACATTCGTATTTCATAGTTAGAGGCAAAATTCTTGGA 364 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 || || |||| ||| ||||| ||| | || |||||||||||||||||||| ||| Sbjct 363 TTCATGAAAGATAAACAACTGCAAAATCATTTGTTAAGGATGTTTTCATTAATCA-AGAA 305 Query 306 CGAAAG 311 |||||| Sbjct 304 CGAAAG 299 >seq135204 Length=435 Score = 77.0 bits (84), Expect = 6e-12 Identities = 101/134 (75%), Gaps = 6/134 (4%) Strand=Plus/Plus Query 188 GATTAATAGGGATAGTCGGGGGTG--TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||| ||| ||||| | ||||| || || ||||| ||||| ||||| Sbjct 1 GATTAATAGGGACAGTTGGGGGCACATTCGTATTTCATAGTTAGAGGCAAAATTATTGGA 60 Query 246 TTTATTGAAGACTAACTA-CTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 || || |||| ||| || || | ||| | || |||||||||||||||||||| || Sbjct 61 TTCATGAAAGA-TAATTAACTACAAAATCATTTGTTAAGGATGTTTTCATTAATCA-AGA 118 Query 305 ACGAAAGTT-AGGG 317 | ||||||| |||| Sbjct 119 AAGAAAGTTGAGGG 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 908279944000