Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq498855 168 3e-39 seq143408 149 3e-33 seq48361 145 3e-32 seq582765 140 1e-30 seq356884 131 7e-28 seq674141 129 2e-27 seq182844 118 4e-24 seq144736 111 6e-22 seq741011 107 8e-21 seq148777 105 3e-20 >seq498855 Length=637 Score = 168 bits (186), Expect = 3e-39 Identities = 208/279 (75%), Gaps = 9/279 (3%) Strand=Plus/Minus Query 406 GGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AA 464 |||| |||||| ||||||||||||||||||| |||| ||||||||| || | || Sbjct 331 GGCCTGTCTTGAAACACGGACCAAGGAGTCTTACATGTATGCGAGTCAATGAGCCAATAA 272 Query 465 ACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCG---TGAGGG-TGCACCATC 519 |||||| | || || ||| ||| ||| || || ||| || ||| ||||| || Sbjct 271 ACCCGTAAGGCGCAAGGAAGCTGACCGGCGG---GATCCCCCTTTGCGGGGTGCACAGTC 215 Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579 | ||| | ||| | | || || || |||| ||||||| || || |||||||||| Sbjct 214 AATCGACCTCGATCTTATGAGAAGGGTTCGAGTGAGAGCATGCCTCTTAAGACCCGAAAG 155 Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639 |||||||||||||||||| | ||||||||||||||| ||| |||||||| ||||||| Sbjct 154 ATGGTGAACTATGCCTGAGCGAGATGAAGCCAGAGGAAATTCTAGTGGAGGCCCGCAGCG 95 Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 | || | ||||||||| | ||| | ||||||||||| Sbjct 94 ATATTGACATGCAAATCGTTTGTCTGACTTGGGTATAGG 56 >seq143408 Length=596 Score = 149 bits (164), Expect = 3e-33 Identities = 208/286 (73%), Gaps = 13/286 (5%) Strand=Plus/Minus Query 406 GGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT--GTCA 463 |||| ||||| ||||||||||||||| ||| |||| | || |||| || || | Sbjct 322 GGCCTATCTTGAAACACGGACCAAGGATTCTTACATGTGTGTGAGTCAACGGACCAGT-A 264 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCC-----GTGAGGGTGCACCA 517 ||| ||| | || || ||| ||||| | ||||| ||| | |||| |||||| Sbjct 263 AACTCGTAAGGCGCAAGGAAGTTGAACTG---TGGGATCCCCCTTCGCGAGG-TGCACCG 208 Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 | |||| | | ||| | | | || || |||| ||||||| |||| ||| |||| Sbjct 207 TTGACCAACCTCGATCTTATGAGGAGGGTTCGAGTGAGAGCATGCCTGTCAAGACTCGAA 148 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||||||||||||||| ||| |||| ||||||| ||||||||||||||||| | | || Sbjct 147 AGATGGTGAACTATGCTTGAGCAGGGCGAAGCCAAAGGAAACTCTGGTGGAGACCCATAG 88 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| || |||||||||| |||| | || ||||||||||||| Sbjct 87 CGGTAGTGATGTGCAAATCGTTCGTTTGACTTAGGTATAGGGGCGA 42 >seq48361 Length=1143 Score = 145 bits (160), Expect = 3e-32 Identities = 131/165 (79%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||||||||||||| |||||| | | || |||| | |||||| ||||| || Sbjct 514 TCGGCGAGTCGAGTTGTTTGGAAATGCAACCCCAATTGGGCGATAAATTCTGTCTAAGGC 573 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| ||| ||||||||| ||||||| |||| ||||||||||||| |||| Sbjct 574 TAAATACGGGCGAGAAACCGATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGGACTT 633 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||| || || ||| || | ||||||||| || ||| ||||| Sbjct 634 TGAAAAAAGGGTCAAAGAGTGCTTGAAATTGTCGAGAGGAAAGCG 678 >seq582765 Length=2632 Score = 140 bits (154), Expect = 1e-30 Identities = 202/279 (72%), Gaps = 7/279 (3%) Strand=Plus/Plus Query 410 CGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT--GTCAAACC 467 ||||||| |||| |||||||| ||||||| || | || |||| ||| || |||| Sbjct 784 CGTCTTGAAACATGGACCAAGAAGTCTAATATGTGTGTGAGTCAACGGGCCAGT-AAACT 842 Query 468 CGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGG--GTGCACCATCGACCG 524 | | | || || ||||| || || | | ||| | | | ||||||| || |||| Sbjct 843 CATAAGACGCAA-GAAAGCTGACTGACGGGATCTCCCCTCACGTGGTGCACCGTCAACCG 901 Query 525 ATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 | | ||| | | || || |||| ||||||| ||||||||| ||||||||||| Sbjct 902 ACCTCGATCTTATGAGAAAAGTTCGAGTGAGAGCATGCTTGTTGGGACTCGAAAGATGGT 961 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 ||||||||||| | | ||| |||||||||||||||||| |||||||| || || | | || Sbjct 962 GAACTATGCCTAAGTGGGGCGAAGCCAGAGGAAACTCTAGTGGAGGCCCGTAGTGATACT 1021 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| |||| | | | || | || ||||||||||||| Sbjct 1022 GACGTATAAATTGTTTGCCAGACTTTGGTATAGGGGCGA 1060 Score = 113 bits (124), Expect = 2e-22 Identities = 121/159 (76%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||||||||||| |||||||| | | || |||| | |||||| || || ||||||| Sbjct 397 GAGTCGAGTTGTTTTGGAATGCAACCCCAATTGGGCGATAAATTCTGTCCAAGGCTAAAT 456 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||| |||||| ||||||| ||| ||| |||||||| |||||| || Sbjct 457 ACAGGCGAGAGACTGATAGCAAACAAGTACCATGAGGAAAAAATGAAAAGGACTTTGAAA 516 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 || |||| ||| || | ||||||| | | | |||||| Sbjct 517 AGGGAGTCAAAGAG-TCTTGAAATTATCGGGAAGGAAGC 554 >seq356884 Length=707 Score = 131 bits (144), Expect = 7e-28 Identities = 128/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| |||||| |||||||||||||||||| |||| || |||||||||| || || || Sbjct 355 TCGGCGAGTCAGGTTGTTTGGGAATGCAGCCCTAATCAGGCGGTAAATTTCATCCAAGGC 296 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| || |||| |||||| | ||||||| || |||| ||||||| |||| Sbjct 295 TAAATACGGGTGAGAGGCCGATATCAAACAAGTACCACGAGGGAAATATGAAAAAGACTT 236 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || ||||||||||| ||||||||| Sbjct 235 TGAAAAGAGAGTCAAAGAGTGTTTGAAATTGTTGGGAGGGAAGCG 191 >seq674141 Length=4770 Score = 129 bits (142), Expect = 2e-27 Identities = 100/119 (84%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||||||||| |||||||||||||||||||||| | ||| |||||| | |||||||| Sbjct 3985 CTGTTGGGACCTAAAAGATGGTGAACTATGCCTGAGTGGGGCAAAGCCAAATGAAACTCT 4044 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||||||||| ||||||| | || | |||||||| ||||| | |||||||||||||| Sbjct 4045 GGTGGAGGCCCGCAGCGATACTAACATGCAAATCACTCGTCTGACTTGGGTATAGGGGC 4103 >seq182844 Length=917 Score = 118 bits (130), Expect = 4e-24 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 |||| ||||||| | || | ||| | | || || || ||| ||||||| |||| Sbjct 320 GGGTCCACCATCAATGGACCTCGATCTTATGAGAAGGGTTCAAGTGAGAGCATGCCTGTC 261 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 ||||||| ||| ||||| |||||||||||| ||||||||||| ||||||||||||||| Sbjct 260 GGGACCCAAAAAATGGTAAACTATGCCTGAGCGGGGTGAAGCCAAAGGAAACTCTGGTGG 201 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 |||| | ||| | || ||||||||| || || || ||| | ||||||| Sbjct 200 AGGCCCATAGCTATATTGATGTGCAAATCTTTCATCTAACTTGAGGATAGGGG 148 Score = 118 bits (130), Expect = 4e-24 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||| ||||||| ||||||||| |||| |||| |||||||| | || || |||||| Sbjct 811 GAGTCAGGTTGTTTAGGAATGCAGTCCTAATTGGGTGGTAAATTGCGTCCAAGCCTAAAT 752 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | || ||||||||||| | ||||||| | || |||| ||||||| |||||| || Sbjct 751 ACGGGTGAGAGACCGATAACAAACAAGTACCGCGAGGGAAATATGAAAAAGACTTTGAAA 692 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||| ||| || | ||||||||| | || | |||| Sbjct 691 AGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGTGGAGCG 652 >seq144736 Length=1437 Score = 111 bits (122), Expect = 6e-22 Identities = 84/99 (85%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 3 ATGGTGAACTATGCCTGAGCGGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAACG 62 Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 | || | | |||||| ||||| | ||||||||||| Sbjct 63 ATATTGACATACAAATCTTTCGTCTGACTTGGGTATAGG 101 >seq741011 Length=2116 Score = 107 bits (118), Expect = 8e-21 Identities = 181/256 (71%), Gaps = 12/256 (5%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT--GTC 462 ||||| || ||| ||||| ||||||||||||| | || | ||||||| | || || Sbjct 1846 CGGCCTGTTTTGAAACACAGACCAAGGAGTCTGATATGTGTGCGAGTCAATAGGCCAGTA 1787 Query 463 AAA-CCCGTGCG-CGTAATGAAAGTGAACGG-AGGTGGGAACCCGTGAGGGTGCACCATC 519 ||| ||||| | | || ||| |||| || ||| | || ||| ||||||||| Sbjct 1786 AAAACCCGTAAGGCACAAGGAAGGTGATTGGCAGG-----ATCCTCGAG--TGCACCATC 1734 Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579 ||| | | | || | | || | || |||| ||||||| || | ||| |||| Sbjct 1733 AACCAACCTTAATCTTATAAGACAGGTTCGAGTGAGAGCATGTCTATCAAAACCTAAAAG 1674 Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639 |||||||| ||||||| | |||| ||||| ||||||||||| | |||||||| |||||| Sbjct 1673 ATGGTGAAGTATGCCTAAGCAGGGCGAAGCTAGAGGAAACTCCGATGGAGGCTGGCAGCG 1614 Query 640 GTTCTGGCGTGCAAAT 655 | || | ||||||| Sbjct 1613 ATACTAACATGCAAAT 1598 >seq148777 Length=603 Score = 105 bits (116), Expect = 3e-20 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 |||||||||||| | || | ||| | | | || || ||| ||||||| |||| Sbjct 291 GGGTGCACCATCAATGGAGCTCGATCTTATGACAAGGGTTCAAGTGAGAGCATGCCTGTC 232 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 ||||||| ||| ||||| |||||||| ||| ||||||||||| ||||||||||| ||| Sbjct 231 GGGACCCAAAAAATGGTAAACTATGCTTGAGCGGGGTGAAGCCAAAGGAAACTCTGATGG 172 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 |||| || ||| | || ||||||||| || || | || | ||||||| Sbjct 171 AGGCCCGTAGCTATATTGATGTGCAAATCTTTCATCTGACTTTAGGATAGGGG 119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2063781118750