Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17]
756,125 sequences; 432,755,284 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq748765 147 6e-33
seq180117 102 2e-19
seq507796 84.2 6e-14
seq393510 77.0 8e-12
seq57277 75.2 3e-11
>seq748765
Length=357
Score = 147 bits (162), Expect = 6e-33
Identities = 135/171 (79%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226
||| ||||| | |||||| | |||||||| | |||||| ||||||| || |||| |
Sbjct 326 ACTTGAGTGAGACAGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTAC 267
Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286
| |||||| |||| ||||||||||| | ||||| || |||||| | ||||||
Sbjct 266 GAAGGAACGCCAAAAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAG 207
Query 287 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337
| |||||||||||| ||||||||||||||||||||||| ||| ||||||||
Sbjct 206 CATGGGGAGCAAACGGGATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 156
>seq180117
Length=395
Score = 102 bits (112), Expect = 2e-19
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
|| || | |||||| || ||||||||| ||||||||||||||||||||| ||| |||
Sbjct 184 TATCTAAGGAATAAACATCGGCTAACTCTATGCCAGCAGCCGCGGTAATACAAAGGATGC 125
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
||| |||| |||||| | ||| |||| ||||| | ||| || | | |||| | | ||
Sbjct 124 AAGTGTTATCCGGAATGATTGGACGTATAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 65
Query 123 GAAATCCCCGGGCTTAACC 141
||||||| |||| ||||
Sbjct 64 CAAATCCCAAGGCTCAACC 46
>seq507796
Length=1569
Score = 84.2 bits (92), Expect = 6e-14
Identities = 218/328 (66%), Gaps = 12/328 (4%)
Strand=Plus/Minus
Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70
||||||||| || |||||| ||| || || | | |||||| ||| |||||| ||||
Sbjct 1422 GAATAAGCATCGTCTAACTCTATGCTAGTAGTCACAGTAATATAGAGGATGCAAGTGTTA 1363
Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130
|| |||| | |||||||||||||| ||| |||| | |||| | | | |||||||
Sbjct 1362 TTCAGAATGATTGGGCGTAAAGCGTTAATAGGTGGTTTTTTAAGTCTGCCTTTAAATCCC 1303
Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACT-GCACGACTAGAGTGTGTCAGAGGGGGGT 189
|||| |||| | || | | ||| || | ||| | || ||||
Sbjct 1302 GAGGCTCAACCCTAAACAGGCGGTCGAAACTACCAAGGGTAG-GAGT---AGAG------ 1253
Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249
|||||| || ||||||||||||| |||| || | | || ||||| | | | ||
Sbjct 1252 GGAATTTTTTATGGAGCAGTGAAATGCATAGAGATTGGAAATAATACCAACGACAAGAGC 1193
Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309
| | || || | ||| ||| || | |||||||| |||||| || |||||||
Sbjct 1192 ACTCTACTAGGCTGACATTGATACTGAGAGACGAAAGCTAGGGGAGTGAATGAGATTAGA 1133
Query 310 TACCCTGGTAGTCCACGCCCTAAACGAT 337
||||| ||||||| | | |||| |||
Sbjct 1132 TACCC-AGTAGTCCTAGTCGTAAATGAT 1106
>seq393510
Length=226
Score = 77.0 bits (84), Expect = 8e-12
Identities = 98/134 (73%), Gaps = 6/134 (4%)
Strand=Plus/Minus
Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249
|||||| | ||| ||| |||||||||||||| || | | ||||||||||||||||
Sbjct 189 GGAATTTCCGGTGGAGCTGTGAAATGCGTAGAGATCGGAAAGAACACCAATGGCGAA--- 133
Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309
||| | || || | ||| || | |||||||| |||| |||| ||||||||
Sbjct 132 AGCACTTTG---CAAGGCCGACACTGAGAGACGAAAGCTAAGGGAACAAATGGGATTAGA 76
Query 310 TACCCTGGTAGTCC 323
||||| |||||||
Sbjct 75 TACCCCAGTAGTCC 62
>seq57277
Length=288
Score = 75.2 bits (82), Expect = 3e-11
Identities = 67/83 (81%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA--GGGTGCAAGCGTT 69
|| |||| |||||||||| ||||||| ||| || ||||| ||| ||| ||||| |||
Sbjct 176 AAGAAGCCCCGGCTAACTTCGTGCCAACAGTCGTGGTAAGACGGGAGGGGGGCAAGTGTT 117
Query 70 AATCGGAATTACTGGGCGTAAAG 92
||||||| |||||||||||||
Sbjct 116 CTTCGGAATGACTGGGCGTAAAG 94
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1279849012000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |