Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq747441 89.7 7e-16 seq755575 87.8 2e-15 seq570045 84.2 3e-14 seq408024 80.6 4e-13 seq693748 73.4 5e-11 >seq747441 Length=405 Score = 89.7 bits (98), Expect = 7e-16 Identities = 82/101 (81%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 143 CACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCG 202 |||||||||||| ||||||||||||| |||||| ||| ||||||| | |||| | || Sbjct 275 CACCCCTTCTCCTGAAGTTACGGGGCTATTTTGTCGAGTTCCTTAGAGAGAGTTGTCTCG 216 Query 203 AACGCCTTAG-TATTCTCTACCTGACCACCTGTGTCGGTTT 242 | |||||| |||| ||||||| |||||||||||| ||| Sbjct 215 CAT-CCTTAGGTATTTTCTACCTACCCACCTGTGTCGATTT 176 >seq755575 Length=1197 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 138 AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTC 197 || ||||||||||||| ||||||||| |||| |||||||||| ||||||| | |||| Sbjct 675 AGAGGCACCCCTTCTCTCGAAGTTACAGGGCTATTTTGCCGACTTCCTTAGGGAGAGTTG 734 Query 198 ACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | | | ||||||||||||| ||| |||||||||||| |||| Sbjct 735 TCTTGTGCCTCCAGGTATTCTCTACCTACCCAGCTGTGTCGGTTTCAGGTA 785 >seq570045 Length=251 Score = 84.2 bits (92), Expect = 3e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 143 CACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCG 202 |||||||||| ||||||||| |||| |||||| ||| ||||||| | |||| || Sbjct 163 CACCCCTTCTTTCGAAGTTACAGGGCTATTTTGTCGAGTTCCTTAGAGAGAGTTGTTTCG 104 Query 203 AACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | ||| ||||||||||||| ||||||||||| |||| |||| Sbjct 103 CGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCAGTTTCAGGTA 58 >seq408024 Length=832 Score = 80.6 bits (88), Expect = 4e-13 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 143 CACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCG 202 |||||||||||||||||||| |||| |||||| | | ||||||| | |||| | | Sbjct 597 CACCCCTTCTCCCGAAGTTATAGGGCTATTTTGTCCAGTTCCTTAGAAAGAGTTGTCTC- 539 Query 203 AACGCCT-TAG-TATTCTCTACCTGACCACCTGTGTCGGTTT 242 ||||| ||| |||||||||||| ||||||| |||||||| Sbjct 538 -ACGCCCCTAGATATTCTCTACCTACCCACCTGAGTCGGTTT 498 >seq693748 Length=786 Score = 73.4 bits (80), Expect = 5e-11 Identities = 75/98 (77%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 144 ACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGA 203 ||||||||||| ||||||||| | | |||||| | | ||| ||| | |||| | | Sbjct 188 ACCCCTTCTCCAGAAGTTACGAGACTATTTTGTCAAGTTCTTTAGAGAGAGTTGTCTCAC 129 Query 204 ACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 || ||| ||||||||||||| |||||| |||||||| Sbjct 128 ACCCCTAAGTATTCTCTACCCACCCACCTATGTCGGTT 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 689313547125