Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq112960 178 3e-42 seq112193 161 2e-37 seq408024 140 8e-31 seq259396 123 6e-26 seq484086 113 1e-22 seq456410 107 5e-21 seq61041 102 2e-19 seq520308 96.9 9e-18 seq234791 96.9 9e-18 seq165732 84.2 5e-14 seq195402 78.8 2e-12 >seq112960 Length=947 Score = 178 bits (196), Expect = 3e-42 Identities = 202/271 (75%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||||||| ||| | ||| ||| |||||| Sbjct 675 GCATCTTCACAGACATGTCTATTTCACTGAGCCTCACTCTAAAACAATGCCCAAATCGTT 734 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct 735 ACGCCTTTCGTGCAAGTCGGAACTTACCTGACAAGGAATTTCGCTACCTTAGGATCGTTA 794 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC----GCGTTAGCTAACCC 188 | |||| ||| |||||| || |||||||| || ||||| | | || | ||| Sbjct 795 TAGTTATGGCTGCCGTTCACTAGGGCTTCGGTCGTCGGCTTCCTTGTCATCAGGTTACCA 854 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || ||||||||| || ||||| |||| ||| |||| | ||| || ||| Sbjct 855 ACTTCCTTGACCTTCCGGAACTACGCAGGTGTCAGCCCCCATACATGGTCTTACGACTTT 914 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 || ||| |||||||||| ||| ||||||| Sbjct 915 GCGGAGACCTGTGTTTTTGGTAAGCAGTCGC 945 >seq112193 Length=946 Score = 161 bits (178), Expect = 2e-37 Identities = 286/418 (68%), Gaps = 27/418 (6%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||||||| || | ||||||| ||| ||| |||||| ||| |||||| Sbjct 395 GCATCTTCACAAACATGACTATTTCACCGAGCCTCTCTCTAAGACAGTGCCTAGATCGTT 336 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 335 ACGCCTTTCGTGCTGGTCGGAACTTACCTGACAAGGAATTTCGCTACCTTAGGACCATTA 276 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | |||||| | || || || ||||||||| || | ||| | | | || | ||| Sbjct 275 TGGTTACGATCCCCATTCACTGGGGCTTCGGTCGATGGCTCTCCTATCATCAGGTCACCA 216 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || ||||||| |||| ||||| | || | ||| |||| | ||| || ||| Sbjct 215 ACTTCCTTGACCTTCCAGCACTGGGCAAGTGTTAGCCCCCATACTTGGTCTTACGACTTT 156 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 | ||| ||||||||| ||||||||| | |||| || || | ||| Sbjct 155 GTGGAGACTTGTGTTTTTGGTAAACAGTCACCCAAGCCTAGTCACTACAACC------CT 102 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| ||| |||| ||| ||| |||||||||| || || Sbjct 101 CTTTGTGAG-AAG----ACACC------------TCTTTTCCTGAAGTTACGGGGCTATT 59 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 || | |||||||| ||||| |||| || ||| ||||||||||||| | |||| Sbjct 58 TTATCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 1 >seq408024 Length=832 Score = 140 bits (154), Expect = 8e-31 Identities = 241/347 (69%), Gaps = 31/347 (9%) Strand=Plus/Minus Query 87 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCC 146 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| Sbjct 832 GGTCGGAACTTACCCGACAAGTAATTTCGCTACCTTAGGACCGTTATAGTTACGACCGCC 773 Query 147 GTTTACCGGGGCTTCGATC----AAGAGCTTCGCGTTAGCTAACCCCATCAATTAACCTT 202 ||| | |||||||| | || | ||| | ||| | ||| | || ||||| Sbjct 772 GTTCATCGGGGCTTTGGTCGCCAACTCCCTTGTCACTAGGTTACCAACTTTCTTGACCTT 713 Query 203 CCGGCA--CCGGGCAGGCGTCA-CACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTG 259 ||||| | ||| |||||||| ||| | |||| | ||| | |||| ||| ||| Sbjct 712 TCGGCACTCTGGGTAGGCGTCAGCACTC-ATACATGGTCTTATGACTTTGTGGAGACCTG 654 Query 260 TGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCA 319 ||||||| ||||||| ||| |||||||| || |||| ||| ||| | Sbjct 653 TGTTTTTTATAAACAATCGTCCGGGCCTGGTCACTGTGACC------CCCTTTGAGAG-A 601 Query 320 AGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTC 379 || |||| |||||||||||||||| | || ||||| | ||||| Sbjct 600 AG----ACACC------------CCTTCTCCCGAAGTTATAGGGCTATTTTGTCCAGTTC 557 Query 380 CTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||| ||||| ||||| || ||| | ||||||||||| | |||| Sbjct 556 CTTAGAAAGAGTTGTCTCACGCCCCTAGATATTCTCTACCTACCCAC 510 >seq259396 Length=598 Score = 123 bits (136), Expect = 6e-26 Identities = 202/289 (70%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 16 TCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACG 75 ||||||||| || || ||||||| | ||| | ||||||| ||| || |||||| Sbjct 49 TCTTCACAGACATGTCTATTTCACCAAAACTCTCTTTGAGACAGTGCCTAGATTGTTACG 108 Query 76 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTG 135 || || |||| ||| |||| |||| |||||||||||| || ||||||||| |||||| | Sbjct 109 CCTTTTGTGCGGGTTGGAATTTACTTGACAAGGAATTTTGCAACCTTAGGATCGTTATAG 168 Query 136 TTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTTAGC---TAACCCCAT 191 ||| | ||||||| ||| |||||||| | |||| || || | | | ||| | Sbjct 169 TTATGATCGCCGTTCACCAGGGCTTCGGTAGCCAGCTCTCCTGTCATCAAGTCACCAACT 228 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251 || ||||| || ||| || |||||||| ||| |||| | ||| | |||| Sbjct 229 TCCTTGACCTTTCGACACTAGGTAGGCGTCAAGCCCCATACATGGTCTTACAACTTTGTG 288 Query 252 GAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || | ||||||| |||||| | || |||||||| || ||||| Sbjct 289 GATACTTTTGTTTTTGGTAAACAATTGCCTAGGCCTGGTCACTGCGACC 337 >seq484086 Length=716 Score = 113 bits (124), Expect = 1e-22 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 16 TCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACG 75 |||||| || || || ||||||| | ||| ||||||| || || |||||| Sbjct 668 TCTTCATAGACATGTCTATTTCACCAAACCTCTCTCCGAGACAGTACCTAAATTGTTACG 609 Query 76 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTG 135 || ||||||| ||| |||||||||| ||||||||||| |||||||||||| |||||| | Sbjct 608 CCTTTCGTGCGGGTTGGAACTTACCTAACAAGGAATTTTGCTACCTTAGGATCGTTATAG 549 Query 136 TTACGGCCGCCGTTTACCGGGGCTT 160 ||| | ||||| || || ||||||| Sbjct 548 TTATGACCGCCTTTCACTGGGGCTT 524 >seq456410 Length=694 Score = 107 bits (118), Expect = 5e-21 Identities = 100/127 (79%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 14 CATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTA 73 |||||||||| || | ||||||| ||| || ||||||| || ||||||| Sbjct 487 CATCTTCACAAACATCTTTATTTCACCGAGCCTTTCTCTGAGACAGTGCTCAGATCGTTA 546 Query 74 CGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 133 ||| || |||| |||| |||||||||||||||||||||| ||||| ||||||||||||| Sbjct 547 TGCCTTTTGTGCGGGTCAGAACTTACCCGACAAGGAATTTTGCTACTTTAGGACCGTTAT 606 Query 134 TGTTACG 140 |||||| Sbjct 607 AGTTACG 613 >seq61041 Length=809 Score = 102 bits (112), Expect = 2e-19 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||||||| || || ||||||| ||| || |||| || || | ||| Sbjct 209 GCATCTTCACAAATATCTCTATTTCACCGAGCCTTTCTCTGAGATAGTGCTTAGGTTGTT 150 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 | ||| ||||||| |||| |||||||||||||||||||||| ||||| |||||| ||||| Sbjct 149 ATGCCTTTCGTGCGGGTCAGAACTTACCCGACAAGGAATTTTGCTACTTTAGGATCGTTA 90 Query 133 TTGTTACGGCCGCC 146 | |||||| |||| Sbjct 89 TAGTTACGATCGCC 76 >seq520308 Length=268 Score = 96.9 bits (106), Expect = 9e-18 Identities = 115/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||||||||||||| || || ||||||| || ||| ||| | ||| || | Sbjct 234 CTGCATCTTCACAAACATATCTATTTCACCAAGCCTCTCCA--AGATATTGCCTAAATTG 177 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 ||||| | ||| ||||||| | ||||| | |||||||||||| ||||||||| || || Sbjct 176 TTACGTCCTTCATGCAGGTGAAAGCTTACTCAACAAGGAATTTCACTACCTTAGAACTGT 117 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATC 165 ||| |||| ||| || |||||| | ||||||||| Sbjct 116 TATAATTACAGCCACCATTTACCAGAGCTTCGATC 82 >seq234791 Length=834 Score = 96.9 bits (106), Expect = 9e-18 Identities = 111/148 (75%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 16 TCTTCACAGCGATT-TCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 ||||||||| ||| || ||||||| | ||| | |||| || ||| || ||| | Sbjct 284 TCTTCACAGACATTGTCTATTTCACCAAACCTCTTTTCGAGATAGTGCCCAAATTGTTCC 343 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 | | |||||| ||| | ||||| | |||||||||||| |||||||||||| ||||| Sbjct 344 GTCTTTCGTGTGGGTTGAAACTTGCTTGACAAGGAATTTTGCTACCTTAGGATTGTTATA 403 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCG 162 |||| | | | |||| |||||||||||| Sbjct 404 GTTATGACTGTCGTTCACCGGGGCTTCG 431 >seq165732 Length=230 Score = 84.2 bits (92), Expect = 5e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 || |||||||||||| |||||||||||| ||| |||| | ||| || ||||| ||| Sbjct 57 TTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGATTTTGCGGAG 116 Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || ||||||| ||||||||||| |||||||| || ||||| Sbjct 117 ACCTATGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTACGACC 162 >seq195402 Length=237 Score = 78.8 bits (86), Expect = 2e-12 Identities = 67/83 (81%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 83 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGC 142 |||||||| | ||||| | |||||||||||| |||||||| |||||||| |||| || Sbjct 164 TGCAGGTCAAAGCTTACTCAACAAGGAATTTCATTACCTTAGAACCGTTATAATTACAGC 105 Query 143 CGCCGTTTACCGGGGCTTCGATC 165 | || |||||| | |||||| || Sbjct 104 CACCATTTACCAGAGCTTCGGTC 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1251266776000