Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17]
756,125 sequences; 432,755,284 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq146862 223 5e-56
seq590101 185 1e-44
seq194420 181 2e-43
seq206288 141 1e-31
seq596774 131 3e-28
seq191678 127 3e-27
seq61215 127 3e-27
seq719308 111 2e-22
seq55130 111 2e-22
seq149012 95.1 2e-17
seq302006 93.3 7e-17
seq291359 91.5 2e-16
seq232026 91.5 2e-16
seq135204 86.0 1e-14
seq37760 78.8 1e-12
seq720387 77.0 5e-12
seq316412 73.4 6e-11
>seq146862
Length=348
Score = 223 bits (246), Expect = 5e-56
Identities = 192/238 (81%), Gaps = 10/238 (4%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||
Sbjct 235 TCAGTGTAGTGCGCGTGCGATCCAAAACATCTAAGGACATCACAGACCTGTTATTGCCTA 176
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC------CAGCCACCAACCA 129
|||||||| | | || | | |||||||||||||||||| ||| | |||
Sbjct 175 AAACTTCCTTAGCCTAAGTGGCCATAGTCCCTCTAAGAAGCTGGTTGCAGAGGCTCACCT 116
Query 130 TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189
| | |||| |||||||| ||||||| ||||||| |||||||||||||||||
Sbjct 115 TCACATA----GCTAGTTAGCAGGCCGAGGTCTCATTCGTTAACGGAATTAACCAGACAA 60
Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 59 ATTGTTCCACCAACTAAGAACGACCATGCACCACCACCCATAGAATCAAGAAAGAGCT 2
>seq590101
Length=211
Score = 185 bits (204), Expect = 1e-44
Identities = 176/221 (80%), Gaps = 22/221 (10%)
Strand=Plus/Minus
Query 39 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAA-GCC 97
|||| |||||||||||||| | |||||||| ||||| |||||||| |||||| || | |
Sbjct 211 AGAATATCTAAGGGCATCATAAACCTGTTACTGCCTTAAACTTCC-TTGGCTTAAACGAC 153
Query 98 AATAGTCCCTCTAAGAA----GCCA-----GC-CACCAAC-CATAGTCGATGGGGCTATT 146
|||||| || |||||| || | || |||| | ||||| ||| |
Sbjct 152 CATAGTCTCTATAAGAAATTGGCTATAGAGGCTCACCTTCACATAG---------CTAGT 102
Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206
||| ||||| ||||||||||| || | |||||||||| |||||||||||||||||||||
Sbjct 101 TAGTAGGTTGAGGTCTCGTTCAATAACAGAATTAACCAAACAAATCACTCCACCAACTAA 42
Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
||||| |||||||||||||||||||||||||||||||||||
Sbjct 41 GAACGACCATGCACCACCACCCATAGAATCAAGAAAGAGCT 1
>seq194420
Length=215
Score = 181 bits (200), Expect = 2e-43
Identities = 175/218 (80%), Gaps = 9/218 (4%)
Strand=Plus/Minus
Query 39 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA 98
|||| |||||||||||||| | |||||||| ||||| |||||||| |||||| |||| |
Sbjct 215 AGAATATCTAAGGGCATCATAAACCTGTTACTGCCTTAAACTTCC-TTGGCTT-AAGCGA 158
Query 99 --ATAGTCCCTCTAAGAAGCCAGCCACCAAC---CATAGTCGATGGGGCTATTTAGCAGG 153
|||||||||||||||| || || | || || | |||| |||| |||
Sbjct 157 CCATAGTCCCTCTAAGAAATTGGCTACAGAGGCTCACCTTC-ACATAGCTAGTTAGTAGG 99
Query 154 TTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGC 213
|| |||||| |||| || | ||||||||| |||||||||||| ||||||||||||| |
Sbjct 98 TTGAGGTCTTGTTCAATAACATAATTAACCAAACAAATCACTCC-CCAACTAAGAACGAC 40
Query 214 CATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251
|||||||||||||||||||||||||||||||||| |||
Sbjct 39 CATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCA 2
>seq206288
Length=282
Score = 141 bits (156), Expect = 1e-31
Identities = 100/114 (88%), Gaps = 4/114 (4%)
Strand=Plus/Minus
Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200
|||| |||||||||| |||||| |||||||| | |||||||||||| |||| |||||||
Sbjct 169 GCTAGTTAGCAGGTTGAGGTCTTGTTCGTTAACAGAATTAACCAGATAAATTGCTCCACC 110
Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254
||||||||||| |||||||||||||||||||||||| ||||||| ||||||
Sbjct 109 AACTAAGAACGACCATGCACCACCACCCATAGAATC----AAGAGCTCTCAATC 60
>seq596774
Length=296
Score = 131 bits (144), Expect = 3e-28
Identities = 86/95 (91%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205
|||||||||| ||||||||||||||| |||||||||||| || | |||||||||||||
Sbjct 164 TTAGCAGGTTGAGGTCTCGTTCGTTAATAGAATTAACCAGATAAGTTACTCCACCAACTA 105
Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
|||||| |||||||||||||||||||||||||||
Sbjct 104 AGAACGATCATGCACCACCACCCATAGAATCAAGA 70
>seq191678
Length=487
Score = 127 bits (140), Expect = 3e-27
Identities = 96/113 (85%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205
|||| ||| |||||||||||| |||| |||||||||||| |||||| || ||| |||||
Sbjct 270 TTAGTAGGCTAAGGTCTCGTTTGTTAACGGAATTAACCAAACAAATTGCTTCACAAACTA 211
Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
| || |||||||||| ||||||||||||||||||||| || | ||| | ||||
Sbjct 210 AAAATGGCCATGCACTACCACCCATAGAATCAAGAAAAAGTTTTCAGTTTGTC 158
>seq61215
Length=504
Score = 127 bits (140), Expect = 3e-27
Identities = 91/105 (87%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200
|||| |||||||| |||||||||||| |||| ||||||||||| |||||| || ||||
Sbjct 221 GCTAGTTAGCAGGCTAAGGTCTCGTTTGTTAATGGAATTAACCAAACAAATTGCTTCACC 280
Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245
|||||| | || ||||||| ||||||||||||||||||||||||
Sbjct 281 AACTAAAAGTGGTCATGCACTACCACCCATAGAATCAAGAAAGAG 325
>seq719308
Length=1748
Score = 111 bits (122), Expect = 2e-22
Identities = 137/187 (73%), Gaps = 24/187 (13%)
Strand=Plus/Minus
Query 18 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 77
||||||| ||| ||| | |||||||||||||||||||||||| || ||||||||||||||
Sbjct 984 AGTGTAGTGCGTGTGTGACCCAGAACATCTAAGGGCATCACAAACTTGTTATTGCCTCAA 925
Query 78 ACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAGCCAC-------CAAC- 127
||||| | | || |||| | |||||||||||||||||| || | |||
Sbjct 924 TCTTCCTTGGCCT--AAGCGGCTATAGTCCCTCTAAGAAGCTAGTTGCGGTGGCTTAACT 867
Query 128 ---CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184
|||||| || |||| ||||| |||||||||| || | ||||||||||
Sbjct 866 TCACATAGT---------TAGTTAGAAGGTTGAGGTCTCGTTTGTCAATGGAATTAACCT 816
Query 185 GACAAAT 191
|||||
Sbjct 815 CGCAAAT 809
>seq55130
Length=403
Score = 111 bits (122), Expect = 2e-22
Identities = 136/187 (73%), Gaps = 28/187 (15%)
Strand=Plus/Minus
Query 28 GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTG 87
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 403 GCGTGCGGTCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTACTATG 344
Query 88 GC-------------TGG---AAGC--CAATAGTCCCTCTAAGAAGC------CAGCCAC 123
|| ||| |||| | |||||||||||||||||| ||| |
Sbjct 343 GCCGCTTAACTTCCTTGGCCTAAGCGGCCATAGTCCCTCTAAGAAGCTGGTTGCAGGGGC 284
Query 124 CAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183
||| | | |||| |||| ||||| || |||| ||||||| ||||||||||
Sbjct 283 TCACC----TTCACATAGCTAGTTAGTAGGTTGAGATCTCATTCGTTAACGGAATTAACT 228
Query 184 AGACAAA 190
|||||||
Sbjct 227 AGACAAA 221
>seq149012
Length=479
Score = 95.1 bits (104), Expect = 2e-17
Identities = 84/100 (84%), Gaps = 5/100 (5%)
Strand=Plus/Plus
Query 18 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 77
||||||||| || || | |||| |||||||||||||||| |||||||||||||||||||
Sbjct 309 AGTGTAGCGTGCATGTG-CCCAAAACATCTAAGGGCATCGTAGACCTGTTATTGCCTCAA 367
Query 78 ACTTCCATTGGCTGGAAGCCA--ATAGTCCCTCTAAGAAG 115
|||||| ||||| ||| | || ||||||||||||||
Sbjct 368 ACTTCC-TTGGC-CTAAGTGATCATGGTCCCTCTAAGAAG 405
>seq302006
Length=248
Score = 93.3 bits (102), Expect = 7e-17
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct 248 ACCAACTAAGAACGACCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCATTTTGT 189
Query 258 C 258
|
Sbjct 188 C 188
>seq291359
Length=243
Score = 91.5 bits (100), Expect = 2e-16
Identities = 87/109 (80%), Gaps = 3/109 (3%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||| |||||| | |||||| ||| ||||| ||| ||||||||| ||||| | || ||||
Sbjct 81 TCAATGTAGCATGTGTGCGGTCCAAAACATGTAAAGGCATCACAAACCTGATCTTACCTC 140
Query 76 AAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGCCAGCCAC 123
|||||| |||| || ||| | | ||||||||||||||||| |||||
Sbjct 141 AAACTTTCATT--CTTGAACCACCATAGTCCCTCTAAGAAGTTGGCCAC 187
>seq232026
Length=423
Score = 91.5 bits (100), Expect = 2e-16
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1 ACCAACTAAGAACGACCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAA 55
>seq135204
Length=435
Score = 86.0 bits (94), Expect = 1e-14
Identities = 50/52 (96%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251
|||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 435 CAACTAAGAACGACCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCA 384
>seq37760
Length=331
Score = 78.8 bits (86), Expect = 1e-12
Identities = 83/106 (78%), Gaps = 9/106 (8%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGC----ATCACAGACCTGTTATTG 71
||| |||||| | |||||| ||||||||| ||| || |||||| ||||| |||||
Sbjct 251 TCACTGTAGCATGTGTGCGGTCCAGAACATGTAAAGGTTTGTATCACAAACCTGATATTG 192
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCA--ATAGTCCCTCTAAGAAG 115
|||||||||| |||| || || ||| ||| |||||||||||||
Sbjct 191 CCTCAAACTTTCATT-CCT--AAACCACCATATTCCCTCTAAGAAG 149
>seq720387
Length=1934
Score = 77.0 bits (84), Expect = 5e-12
Identities = 90/120 (75%), Gaps = 4/120 (3%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||| |||| | | | ||| ||| |||||||||| |||| | |||
Sbjct 937 ACTCGTTGAATACATCAATGTAACACACATGCAATCCAAAACATCTAAGAGCATTATAGA 878
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA--ATAGTCCCTCTAAGAAGCCAG 119
||||||||||| ||||| |||| | || || | | |||||||||||||||||| ||
Sbjct 877 CCTGTTATTGCTTCAAATTTCCTTCACCT--AAACTATCATAGTCCCTCTAAGAAGCTAG 820
>seq316412
Length=479
Score = 73.4 bits (80), Expect = 6e-11
Identities = 54/63 (86%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 21 GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 80
|||||| || || |||| |||| |||||||||||||| | |||||||| ||||| |||||
Sbjct 66 GTAGCGTGCCTGTGGCCTAGAATATCTAAGGGCATCATAAACCTGTTACTGCCTTAAACT 7
Query 81 TCC 83
|||
Sbjct 6 TCC 4
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 790963471125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |