Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq146862 223 5e-56 seq590101 185 1e-44 seq194420 181 2e-43 seq206288 141 1e-31 seq596774 131 3e-28 seq191678 127 3e-27 seq61215 127 3e-27 seq719308 111 2e-22 seq55130 111 2e-22 seq149012 95.1 2e-17 seq302006 93.3 7e-17 seq291359 91.5 2e-16 seq232026 91.5 2e-16 seq135204 86.0 1e-14 seq37760 78.8 1e-12 seq720387 77.0 5e-12 seq316412 73.4 6e-11 >seq146862 Length=348 Score = 223 bits (246), Expect = 5e-56 Identities = 192/238 (81%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||| ||||||||| ||| ||||||||||| |||||||||||||||||||||| Sbjct 235 TCAGTGTAGTGCGCGTGCGATCCAAAACATCTAAGGACATCACAGACCTGTTATTGCCTA 176 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC------CAGCCACCAACCA 129 |||||||| | | || | | |||||||||||||||||| ||| | ||| Sbjct 175 AAACTTCCTTAGCCTAAGTGGCCATAGTCCCTCTAAGAAGCTGGTTGCAGAGGCTCACCT 116 Query 130 TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 | | |||| |||||||| ||||||| ||||||| ||||||||||||||||| Sbjct 115 TCACATA----GCTAGTTAGCAGGCCGAGGTCTCATTCGTTAACGGAATTAACCAGACAA 60 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 59 ATTGTTCCACCAACTAAGAACGACCATGCACCACCACCCATAGAATCAAGAAAGAGCT 2 >seq590101 Length=211 Score = 185 bits (204), Expect = 1e-44 Identities = 176/221 (80%), Gaps = 22/221 (10%) Strand=Plus/Minus Query 39 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAA-GCC 97 |||| |||||||||||||| | |||||||| ||||| |||||||| |||||| || | | Sbjct 211 AGAATATCTAAGGGCATCATAAACCTGTTACTGCCTTAAACTTCC-TTGGCTTAAACGAC 153 Query 98 AATAGTCCCTCTAAGAA----GCCA-----GC-CACCAAC-CATAGTCGATGGGGCTATT 146 |||||| || |||||| || | || |||| | ||||| ||| | Sbjct 152 CATAGTCTCTATAAGAAATTGGCTATAGAGGCTCACCTTCACATAG---------CTAGT 102 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||| ||||| ||||||||||| || | |||||||||| ||||||||||||||||||||| Sbjct 101 TAGTAGGTTGAGGTCTCGTTCAATAACAGAATTAACCAAACAAATCACTCCACCAACTAA 42 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| ||||||||||||||||||||||||||||||||||| Sbjct 41 GAACGACCATGCACCACCACCCATAGAATCAAGAAAGAGCT 1 >seq194420 Length=215 Score = 181 bits (200), Expect = 2e-43 Identities = 175/218 (80%), Gaps = 9/218 (4%) Strand=Plus/Minus Query 39 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA 98 |||| |||||||||||||| | |||||||| ||||| |||||||| |||||| |||| | Sbjct 215 AGAATATCTAAGGGCATCATAAACCTGTTACTGCCTTAAACTTCC-TTGGCTT-AAGCGA 158 Query 99 --ATAGTCCCTCTAAGAAGCCAGCCACCAAC---CATAGTCGATGGGGCTATTTAGCAGG 153 |||||||||||||||| || || | || || | |||| |||| ||| Sbjct 157 CCATAGTCCCTCTAAGAAATTGGCTACAGAGGCTCACCTTC-ACATAGCTAGTTAGTAGG 99 Query 154 TTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGC 213 || |||||| |||| || | ||||||||| |||||||||||| ||||||||||||| | Sbjct 98 TTGAGGTCTTGTTCAATAACATAATTAACCAAACAAATCACTCC-CCAACTAAGAACGAC 40 Query 214 CATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 |||||||||||||||||||||||||||||||||| ||| Sbjct 39 CATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCA 2 >seq206288 Length=282 Score = 141 bits (156), Expect = 1e-31 Identities = 100/114 (88%), Gaps = 4/114 (4%) Strand=Plus/Minus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 |||| |||||||||| |||||| |||||||| | |||||||||||| |||| ||||||| Sbjct 169 GCTAGTTAGCAGGTTGAGGTCTTGTTCGTTAACAGAATTAACCAGATAAATTGCTCCACC 110 Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 ||||||||||| |||||||||||||||||||||||| ||||||| |||||| Sbjct 109 AACTAAGAACGACCATGCACCACCACCCATAGAATC----AAGAGCTCTCAATC 60 >seq596774 Length=296 Score = 131 bits (144), Expect = 3e-28 Identities = 86/95 (91%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||||||||| ||||||||||||||| |||||||||||| || | ||||||||||||| Sbjct 164 TTAGCAGGTTGAGGTCTCGTTCGTTAATAGAATTAACCAGATAAGTTACTCCACCAACTA 105 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||| ||||||||||||||||||||||||||| Sbjct 104 AGAACGATCATGCACCACCACCCATAGAATCAAGA 70 >seq191678 Length=487 Score = 127 bits (140), Expect = 3e-27 Identities = 96/113 (85%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||| ||| |||||||||||| |||| |||||||||||| |||||| || ||| ||||| Sbjct 270 TTAGTAGGCTAAGGTCTCGTTTGTTAACGGAATTAACCAAACAAATTGCTTCACAAACTA 211 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | || |||||||||| ||||||||||||||||||||| || | ||| | |||| Sbjct 210 AAAATGGCCATGCACTACCACCCATAGAATCAAGAAAAAGTTTTCAGTTTGTC 158 >seq61215 Length=504 Score = 127 bits (140), Expect = 3e-27 Identities = 91/105 (87%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 |||| |||||||| |||||||||||| |||| ||||||||||| |||||| || |||| Sbjct 221 GCTAGTTAGCAGGCTAAGGTCTCGTTTGTTAATGGAATTAACCAAACAAATTGCTTCACC 280 Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 |||||| | || ||||||| |||||||||||||||||||||||| Sbjct 281 AACTAAAAGTGGTCATGCACTACCACCCATAGAATCAAGAAAGAG 325 >seq719308 Length=1748 Score = 111 bits (122), Expect = 2e-22 Identities = 137/187 (73%), Gaps = 24/187 (13%) Strand=Plus/Minus Query 18 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 77 ||||||| ||| ||| | |||||||||||||||||||||||| || |||||||||||||| Sbjct 984 AGTGTAGTGCGTGTGTGACCCAGAACATCTAAGGGCATCACAAACTTGTTATTGCCTCAA 925 Query 78 ACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAGCCAC-------CAAC- 127 ||||| | | || |||| | |||||||||||||||||| || | ||| Sbjct 924 TCTTCCTTGGCCT--AAGCGGCTATAGTCCCTCTAAGAAGCTAGTTGCGGTGGCTTAACT 867 Query 128 ---CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184 |||||| || |||| ||||| |||||||||| || | |||||||||| Sbjct 866 TCACATAGT---------TAGTTAGAAGGTTGAGGTCTCGTTTGTCAATGGAATTAACCT 816 Query 185 GACAAAT 191 ||||| Sbjct 815 CGCAAAT 809 >seq55130 Length=403 Score = 111 bits (122), Expect = 2e-22 Identities = 136/187 (73%), Gaps = 28/187 (15%) Strand=Plus/Minus Query 28 GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTG 87 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 403 GCGTGCGGTCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTACTATG 344 Query 88 GC-------------TGG---AAGC--CAATAGTCCCTCTAAGAAGC------CAGCCAC 123 || ||| |||| | |||||||||||||||||| ||| | Sbjct 343 GCCGCTTAACTTCCTTGGCCTAAGCGGCCATAGTCCCTCTAAGAAGCTGGTTGCAGGGGC 284 Query 124 CAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183 ||| | | |||| |||| ||||| || |||| ||||||| |||||||||| Sbjct 283 TCACC----TTCACATAGCTAGTTAGTAGGTTGAGATCTCATTCGTTAACGGAATTAACT 228 Query 184 AGACAAA 190 ||||||| Sbjct 227 AGACAAA 221 >seq149012 Length=479 Score = 95.1 bits (104), Expect = 2e-17 Identities = 84/100 (84%), Gaps = 5/100 (5%) Strand=Plus/Plus Query 18 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 77 ||||||||| || || | |||| |||||||||||||||| ||||||||||||||||||| Sbjct 309 AGTGTAGCGTGCATGTG-CCCAAAACATCTAAGGGCATCGTAGACCTGTTATTGCCTCAA 367 Query 78 ACTTCCATTGGCTGGAAGCCA--ATAGTCCCTCTAAGAAG 115 |||||| ||||| ||| | || |||||||||||||| Sbjct 368 ACTTCC-TTGGC-CTAAGTGATCATGGTCCCTCTAAGAAG 405 >seq302006 Length=248 Score = 93.3 bits (102), Expect = 7e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct 248 ACCAACTAAGAACGACCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCATTTTGT 189 Query 258 C 258 | Sbjct 188 C 188 >seq291359 Length=243 Score = 91.5 bits (100), Expect = 2e-16 Identities = 87/109 (80%), Gaps = 3/109 (3%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||| | |||||| ||| ||||| ||| ||||||||| ||||| | || |||| Sbjct 81 TCAATGTAGCATGTGTGCGGTCCAAAACATGTAAAGGCATCACAAACCTGATCTTACCTC 140 Query 76 AAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGCCAGCCAC 123 |||||| |||| || ||| | | ||||||||||||||||| ||||| Sbjct 141 AAACTTTCATT--CTTGAACCACCATAGTCCCTCTAAGAAGTTGGCCAC 187 >seq232026 Length=423 Score = 91.5 bits (100), Expect = 2e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 1 ACCAACTAAGAACGACCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAA 55 >seq135204 Length=435 Score = 86.0 bits (94), Expect = 1e-14 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 |||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 435 CAACTAAGAACGACCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCA 384 >seq37760 Length=331 Score = 78.8 bits (86), Expect = 1e-12 Identities = 83/106 (78%), Gaps = 9/106 (8%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGC----ATCACAGACCTGTTATTG 71 ||| |||||| | |||||| ||||||||| ||| || |||||| ||||| ||||| Sbjct 251 TCACTGTAGCATGTGTGCGGTCCAGAACATGTAAAGGTTTGTATCACAAACCTGATATTG 192 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCA--ATAGTCCCTCTAAGAAG 115 |||||||||| |||| || || ||| ||| ||||||||||||| Sbjct 191 CCTCAAACTTTCATT-CCT--AAACCACCATATTCCCTCTAAGAAG 149 >seq720387 Length=1934 Score = 77.0 bits (84), Expect = 5e-12 Identities = 90/120 (75%), Gaps = 4/120 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||| |||| | | | ||| ||| |||||||||| |||| | ||| Sbjct 937 ACTCGTTGAATACATCAATGTAACACACATGCAATCCAAAACATCTAAGAGCATTATAGA 878 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA--ATAGTCCCTCTAAGAAGCCAG 119 ||||||||||| ||||| |||| | || || | | |||||||||||||||||| || Sbjct 877 CCTGTTATTGCTTCAAATTTCCTTCACCT--AAACTATCATAGTCCCTCTAAGAAGCTAG 820 >seq316412 Length=479 Score = 73.4 bits (80), Expect = 6e-11 Identities = 54/63 (86%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 21 GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 80 |||||| || || |||| |||| |||||||||||||| | |||||||| ||||| ||||| Sbjct 66 GTAGCGTGCCTGTGGCCTAGAATATCTAAGGGCATCATAAACCTGTTACTGCCTTAAACT 7 Query 81 TCC 83 ||| Sbjct 6 TCC 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 790963471125