Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq529464 338 1e-90 seq496635 316 3e-84 seq185932 279 9e-73 seq176050 250 4e-64 seq358487 201 2e-49 seq18579 145 1e-32 seq662966 123 4e-26 seq480744 102 1e-19 seq255767 100 5e-19 seq551279 78.8 2e-12 >seq529464 Length=534 Score = 338 bits (374), Expect = 1e-90 Identities = 246/284 (87%), Gaps = 1/284 (0%) Strand=Plus/Plus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| |||| | | || |||||||||||| ||||||||||||||||||||||||||| Sbjct 5 GAATTACTATTGCGAC-ACTGTCATCAGTAGGATAAAACTAACCTGTCTCATGACGGTCT 63 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 ||||| | ||||||||||||||| || |||||||||||||| ||| ||||||| ||| Sbjct 64 AAACCTAACTCACGTTCCCTATTGGTAAGTGAACAATCCAACACTTGGTGAATTCTACTT 123 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 | ||||||| |||||||||||||||||||| |||||||||||| |||||||| ||||| Sbjct 124 CACAATGATAGAAAGAGCCGACATCGAAGGATAAAAAAGCAACGTTGCTATGAATGCTTG 183 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 ||||||| |||||| |||||| ||||||||||||| || ||||||||| |||||||||| Sbjct 184 GCTGCCATAAGCCAATTATCCATGTGGTAACTTTTATGACACCTCTAGATTCAAATTTCG 243 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | || |||||||||||||||| || |||||| ||| |||||| Sbjct 244 AAGGTTTAAAGGATCGATAGGCTACGCTTTCAACGTTCGTATTC 287 >seq496635 Length=574 Score = 316 bits (350), Expect = 3e-84 Identities = 249/295 (84%), Gaps = 6/295 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||| ||| |||||||| Sbjct 20 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAGAAC----CTGTCTCA 74 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||| ||||||| |||| |||||||||||||||||||| || ||| || Sbjct 75 TGACGGTCTAAACCTAGCTCACATTCCTTATTAGTGGGTGAACAATCCCACACTTGGTGA 134 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| || |||| ||||||||||||| |||||||||||| |||||| ||||| Sbjct 135 ATTCTATTTCACAATTATAGTAAGAGCCGACATCAAAGGATCAAAAAACAACGTTGCTAT 194 Query 181 GAACGCTTGGCTGCCAC-AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||| ||||||||||| ||||||||||||||||||||||| |||||| ||||||||| Sbjct 195 GAACATTTGGCTGCCACAAAGCCAGTTATCCCTGTGGTAACCTTTCTGAAACCTCTAGCT 254 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||||||| | | || |||||||||||||| |||| ||||||| |||| ||||||| Sbjct 255 TCAAATTCCAAAGGTCTAAAGGATCGATATGCCATACTTTCACGGTTCGTATTCA 309 >seq185932 Length=280 Score = 279 bits (308), Expect = 9e-73 Identities = 223/266 (84%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||| ||||||| |||||||||||| Sbjct 20 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAATAGGGTA----TAACCTGTCTCA 74 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||| ||||||||| ||||||| |||| |||| ||||||||||||||| || ||| || Sbjct 75 TGACAGTCTAAACCTAGCTCACATTCCTTATTGGTGGGTGAACAATCCCACACTTGGTGA 134 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| || ||||||||| |||||||| |||||| |||||||||||| ||||| Sbjct 135 ATTCTATTTCACAATTATAGGAAGAACCGACATCAAAGGATAAAAAAGCAACGTTGCTAT 194 Query 181 GAACGCTTGGCTGCCAC-AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || | ||||||||||| ||||||||||||| |||||||||||||||| |||||||||| Sbjct 195 GAGCATTTGGCTGCCACAAAGCCAGTTATCCTTGTGGTAACTTTTCTGACACCTCTAGCT 254 Query 240 TCAAATTTCGAGGGACTAAAGGATCG 265 ||||||| ||| || ||||||||||| Sbjct 255 TCAAATTCCGAAGGTCTAAAGGATCG 280 >seq176050 Length=460 Score = 250 bits (276), Expect = 4e-64 Identities = 199/238 (84%), Gaps = 5/238 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | | | | |||||||||||||| |||||||||||| Sbjct 233 TACTAGGTTGAATTACTATGGTGACT-CTATCATCAGTAGGGTA----TAACCTGTCTCA 179 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||| || |||||||| |||||||| | |||| ||||||||||||||| || ||| || Sbjct 178 CGACAGTTTAAACCCAACTCACGTTTCTTATTGGTGGGTGAACAATCCCACACTTGGTGA 119 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| |||| |||||||||||| |||| ||| || |||||||||||||| || |||| Sbjct 118 ATTCTACTTCACAATGATAGGAAGAACCGATATCAAAAGATCAAAAAGCAACATCTCTAT 59 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 58 GAACGCTTGGCTGCCACAAGCCAGGTATCCCTGTGGTAACTTTTCTGACACCTCTAGC 1 >seq358487 Length=390 Score = 201 bits (222), Expect = 2e-49 Identities = 111/111 (100%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 185 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 60 Query 245 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 111 >seq18579 Length=363 Score = 145 bits (160), Expect = 1e-32 Identities = 97/108 (90%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 185 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 363 GCTTGGCTGCCACAAGCCAGGTATCCCTGTGGTAACTTTTCTGACACCTCTAGCCTCAAA 304 Query 245 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 || || || |||| |||||||| ||||||||||||||||| |||| Sbjct 303 TTCTGAAGGTATAAATGATCGATATGCCACACTTTCATGGTTCATATT 256 >seq662966 Length=808 Score = 123 bits (136), Expect = 4e-26 Identities = 144/195 (74%), Gaps = 11/195 (6%) Strand=Plus/Minus Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 |||||||||||||||||| |||||| ||||| ||| |||| |||| || | Sbjct 738 TAAAACTAACCTGTCTCA----------AACCCAACTCACTTTCTCTATGGGTGGATGGA 689 Query 103 CAATCCAACGCTTACCGAATTCTGC-TTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161 |||| |||| ||| | || | ||| |||||||||||||| || | ||||| | Sbjct 688 CAATTCAACACTTGGTAATTTTTTTATTCAAAATGATAGGAAGAGCTGATGTTGAAGGGT 629 Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 ||| |||||| || || |||| ||||||| ||| | || |||||| |||||||||| Sbjct 628 CAACAAGCAATGTTTGTAGGAACACTTGGCTAAAACAGGACAATTATCCTTGTGGTAACT 569 Query 222 TTTCTGGCACCTCTA 236 |||||| |||||||| Sbjct 568 TTTCTGACACCTCTA 554 >seq480744 Length=591 Score = 102 bits (112), Expect = 1e-19 Identities = 77/91 (85%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 196 ACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGAC 255 ||||||| ||||||| | ||||||||||| |||||||||||| ||||||||| | || | Sbjct 420 ACAAGCCGGTTATCCATATGGTAACTTTTTTGGCACCTCTAGTTTCAAATTTCAAAGGTC 479 Query 256 TAAAGGATCGATAGGCCACACTTTCATGGTT 286 ||| ||||| |||||||| ||||| | |||| Sbjct 480 TAATGGATCCATAGGCCATACTTTAACGGTT 510 >seq255767 Length=345 Score = 100 bits (110), Expect = 5e-19 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274 ||||||||||||| |||||||||| ||||||| ||| || |||||||||||||| |||| Sbjct 1 GGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATATGCCAT 60 Query 275 ACTTTCATGGTTTGTATTCA 294 ||||||| ||| ||||||| Sbjct 61 ACTTTCACAGTTCGTATTCA 80 >seq551279 Length=602 Score = 78.8 bits (86), Expect = 2e-12 Identities = 67/82 (82%), Gaps = 7/82 (9%) Strand=Plus/Plus Query 41 GGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT----TAGT- 95 ||||||| |||||||||||| || |||| |||||| | ||||||||||||| || | Sbjct 39 GGTAAAATTAACCTGTCTCACGATGGTCCAAACCCGGTTCACGTTCCCTATTCCCTATTG 98 Query 96 --GGGTGAACAATCCAACGCTT 115 |||||||||||||||| ||| Sbjct 99 ACGGGTGAACAATCCAACACTT 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 847939668000