Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq880 181 2e-43 seq511650 167 5e-39 seq553357 161 2e-37 seq595140 156 9e-36 seq102179 140 7e-31 seq265423 131 4e-28 seq640505 127 4e-27 seq555976 111 3e-22 seq131160 111 3e-22 seq755847 102 2e-19 seq482562 98.7 2e-18 seq630980 96.9 7e-18 seq671043 89.7 1e-15 seq275573 89.7 1e-15 seq726033 87.8 4e-15 seq35909 86.0 1e-14 seq532599 73.4 8e-11 seq36958 73.4 8e-11 >seq880 Length=1136 Score = 181 bits (200), Expect = 2e-43 Identities = 152/184 (83%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 14 AGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATT 73 || |||||| || | |||||| ||||| || |||| |||||||||||||| || ||| Sbjct 426 AGGCCTTCTATCTC-CACGCGACATTG-CTCCATCAAGCTTTCGCCCATTGCGAAAAATT 369 Query 74 CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCAT 133 ||||| |||| ||||||||||||| |||| |||||||||| | |||||| ||||||| Sbjct 368 CCCCATTGCTATCTCCCGTAGGAGTTTGGATTGTGTCTCAGTCCTAGTGTGGTTGATCAT 309 Query 134 CCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 ||||||||||||| ||| |||||||| ||||| || ||| |||||||||||||||||| Sbjct 308 CCTCTCAGACCAGCTACTGATCGTCGTATTGGTAAGATATTGCCTCACCAACTAGCTAAT 249 Query 194 CCGA 197 | || Sbjct 248 CAGA 245 >seq511650 Length=600 Score = 167 bits (184), Expect = 5e-39 Identities = 146/179 (82%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 19 TTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCA 78 |||| || | |||||| ||||| || |||||| ||||||||||||| || | |||||| Sbjct 175 TTCTATCTC-CACGCGACATTG-CTCCATCAGGATTTCGCCCATTGTGAAAAACTCCCCA 232 Query 79 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCT 138 |||| ||||||||||||| |||| |||||||||| | |||||| |||||||| ||| Sbjct 233 TTGCTATCTCCCGTAGGAGTTTGGATTGTGTCTCAGTACTAGTGTGGTTGATCATCTTCT 292 Query 139 CAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA 197 |||||||| ||| |||| ||| ||||| || ||| ||||||||||||||||||| || Sbjct 293 CAGACCAGCTACTGATCATCGTATTGGTAAGATATTGCCTCACCAACTAGCTAATCAGA 351 >seq553357 Length=280 Score = 161 bits (178), Expect = 2e-37 Identities = 153/194 (79%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 25 CACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTG 84 ||| |||||| |||| ||||||| |||||||||||||||||||| ||||||||| ||| Sbjct 280 CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACGACTG 222 Query 85 CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACC 144 || ||||| |||||| || ||||||||||| |||||||| ||||||||| ||||| Sbjct 221 CCCCCCGTGGGAGTCCGGGACGTGTCTCAGTCCCAGTGTGGCTGATCATCTGAAAAGACC 162 Query 145 AGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGC 204 || || | || | ||||| |||| |||||| |||||||| ||||| | | |||| Sbjct 161 AGCTAAGCAT-----CATTGGTCAGCCTTTACCTGACCAACTACCTAATACTATGCAGGC 107 Query 205 TCATCTGATAGCGC 218 ||||| | ||||| Sbjct 106 TCATCAAACAGCGC 93 >seq595140 Length=218 Score = 156 bits (172), Expect = 9e-36 Identities = 117/132 (89%), Gaps = 4/132 (3%) Strand=Plus/Plus Query 71 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGT-CTCAGTTCCAGT-GTGACTG 128 |||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||| ||| Sbjct 3 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTACTCAGTCCCAGTAGTGGCTG 62 Query 129 ATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAG-CCATTACCTCACCAACTA 187 ||||||||||| |||||| ||| |||| |||||||||| || | ||| |||||||||||| Sbjct 63 ATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGACTATTGCCTCACCAACTA 122 Query 188 G-CTAATCCGAC 198 | |||||| ||| Sbjct 123 GTCTAATCAGAC 134 >seq102179 Length=1915 Score = 140 bits (154), Expect = 7e-31 Identities = 129/162 (80%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 36 CATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGG 95 ||||| || |||| | ||| |||||||| || ||||||||||| || ||| |||| Sbjct 1504 CATTG-CTCCATCAAGATTTTGCCCATTGCGAAAAATTCCCCACTGTTGTCTCTCGTAAA 1562 Query 96 AGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATC 155 | ||| | ||||||||| | |||||||| ||||||||||||||||| || ||| |||| Sbjct 1563 ATTCTAGGTCGTGTCTCAATCCCAGTGTGGTTGATCATCCTCTCAGACTAGCTACCGATC 1622 Query 156 GTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA 197 | |||||||| ||| ||| |||||||||||||||||| || Sbjct 1623 ATTGCCTTGGTAAGCTATTGTCTCACCAACTAGCTAATCAGA 1664 >seq265423 Length=261 Score = 131 bits (144), Expect = 4e-28 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 46 ATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACC 105 |||| |||||| ||| ||| | |||||||||| |||||||| ||||||||| | | Sbjct 252 ATCAAGCTTTCACCCCTTGCAGAGAATTCCCCACTTTTGCCTCCCATAGGAGTCTAGGTC 193 Query 106 GTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGG 165 ||||| ||| ||| |||| |||||||| | ||||||||| || |||| ||||||| Sbjct 192 ATGTCTTAGTCCCAATGTGTCTGATCATGCCCTCAGACCAACTATTGATCATCGCCTTAA 133 Query 166 TGAGCCATTACCTCACCAACTAGCTAATCCGA 197 | ||| ||| ||||||||||||||||||| || Sbjct 132 TAAGCTATTGCCTCACCAACTAGCTAATCAGA 101 >seq640505 Length=2646 Score = 127 bits (140), Expect = 4e-27 Identities = 117/148 (79%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 46 ATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACC 105 ||||||||||| ||||||| || ||||||||||| |||||| ||| |||| ||| Sbjct 24 ATCAGGCTTTCTCCCATTGCAGAAAATTCCCCACTGTTGCCTCTTGTAAGAGTTTGGGTT 83 Query 106 GTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGG 165 |||||||||| | |||||| || ||||||||||| ||| | ||| ||| || |||||| Sbjct 84 GTGTCTCAGTCCTAGTGTGGCTAATCATCCTCTCGGACTATCTACTGATTATCACCTTGG 143 Query 166 TGAGCCATTACCTCACCAACTAGCTAAT 193 | | |||||||| ||||||| ||||| Sbjct 144 TAAATTATTACCTCGCCAACTAACTAAT 171 >seq555976 Length=593 Score = 111 bits (122), Expect = 3e-22 Identities = 81/94 (86%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 105 CGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTG 164 ||||||||||| ||||||| |||||||||||||||||||| ||| |||| |||| ||| Sbjct 328 CGTGTCTCAGTCTCAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCATCGCTTTG 387 Query 165 GTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || || ||| ||||||||||||||||||| ||| Sbjct 388 GTAAGTTATTGCCTCACCAACTAGCTAATCAGAC 421 >seq131160 Length=423 Score = 111 bits (122), Expect = 3e-22 Identities = 120/158 (76%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 52 CTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCT 111 || ||||||||||||||| ||||||||||||| | ||| | ||||||||| ||||| Sbjct 22 CTGTCGCCCATTGTCCAAGATTCCCCACTGCTATCCCCCATGGGAGTCTGGGT--TGTCT 79 Query 112 CAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCC 171 || | ||| |||||||||||||| ||| || || | ||| | | |||||| |||| Sbjct 80 CAATCCCAAAGTGACTGATCATCCGAAAAGATCAACTAAGCATCATTGGCTTGGTTAGCC 139 Query 172 ATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATC 209 | |||| ||||||| ||||| || ||||||||| Sbjct 140 TTGACCTGGCCAACTACCTAATATTACACAGGCTCATC 177 >seq755847 Length=781 Score = 102 bits (112), Expect = 2e-19 Identities = 118/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 52 CTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCT 111 || ||||||||||||||| ||||||||||||| || || | |||||||| | ||||| Sbjct 760 CTGTCGCCCATTGTCCAAGATTCCCCACTGCTACCCACCATGGGAGTCTGAGC--TGTCT 703 Query 112 CAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCC 171 || | |||||||| ||||||||| | | || || ||| | | |||||| |||| Sbjct 702 CAATCCCAGTGTGGCTGATCATCAGAAAAAATCAACTAAACATCATTGGCTTGGTCAGCC 643 Query 172 ATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATC 209 | |||| |||||||| ||||| || | ||||||| Sbjct 642 TTGACCTGACCAACTACCTAATATTACACATGCTCATC 605 >seq482562 Length=498 Score = 98.7 bits (108), Expect = 2e-18 Identities = 100/128 (78%), Gaps = 3/128 (2%) Strand=Plus/Plus Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTC--AGTTCCAGTGTGA 125 || ||| ||| |||| | ||| ||| |||||||| ||||||| |||| || | || Sbjct 169 AAAATTTTCCATTGCTACTTCC-GTATGAGTCTGGGTTGTGTCTCTTAGTTTCAATATGG 227 Query 126 CTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAAC 185 ||||||||||||||||||| ||| |||| ||| |||| | || |||||||| |||||| Sbjct 228 TTGATCATCCTCTCAGACCACTTAATGATCATCGTCTTGATAAGTCATTACCTTACCAAC 287 Query 186 TAGCTAAT 193 ||| |||| Sbjct 288 TAGTTAAT 295 >seq630980 Length=860 Score = 96.9 bits (106), Expect = 7e-18 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 113 AGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCA 172 ||| |||||||| ||||||||||||||||| ||| ||| |||| ||| | ||| ||| | Sbjct 359 AGTCCCAGTGTGGCTGATCATCCTCTCAGATCAGCTACTGATCATCGTGTAGGTAAGCTA 300 Query 173 TTACCTCACCAACTAGCTAATCCGAC 198 || ||||||||||||||||||| ||| Sbjct 299 TTGCCTCACCAACTAGCTAATCAGAC 274 >seq671043 Length=2435 Score = 89.7 bits (98), Expect = 1e-15 Identities = 93/121 (77%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 80 TGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTC 139 || || ||||||||||||||| | |||||||||| ||| ||| ||||||| |||| Sbjct 1671 TGTTGTCTCCCGTAGGAGTCTAGGTAGTGTCTCAGTCCCAAGGTGGTTGATCATTCTCTT 1612 Query 140 AGACCAGTTACGGATCGTCGCCTTGGTGAGCC--ATTACCTCACCAACTAGCTAATCCGA 197 ||| || || || | || |||||| |||| ||| ||||||||| ||||||||| || Sbjct 1611 AGATCACATATTGACCATCATCTTGGTAAGCCATATTGCCTCACCAAGTAGCTAATCAGA 1552 Query 198 C 198 | Sbjct 1551 C 1551 >seq275573 Length=391 Score = 89.7 bits (98), Expect = 1e-15 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 117 CCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTAC 176 |||||||| |||||||||||||| || || ||| |||| |||||||||| ||| ||| Sbjct 391 CCAGTGTGGTTGATCATCCTCTCAAACTAGCTACTGATCATCGCCTTGGTAAGCTATTGT 332 Query 177 CTCACCAACTAGCTAAT 193 ||||||||||||||||| Sbjct 331 CTCACCAACTAGCTAAT 315 >seq726033 Length=5078 Score = 87.8 bits (96), Expect = 4e-15 Identities = 115/158 (73%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 36 CATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGG 95 ||||| || || ||||||| |||||||| || ||| |||| || || ||||| |||| Sbjct 1164 CATTG-CTCCATTAGGCTTTTACCCATTGTGGAAAATTTCCCATTGTTGTCTCCCATAGG 1222 Query 96 AGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATC 155 ||| | | | || | ||| |||||| | |||||||||||| ||| | || ||| Sbjct 1223 AGTTTAGGCATTGCTTTAGTCTTAGTGTGGTTTATCATCCTCTCACACCCGGTATTGATT 1282 Query 156 GTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 || |||||| | | | ||| || | |||||||||||| Sbjct 1283 GTTGCCTTGATAAACTATTGTCTTATCAACTAGCTAAT 1320 >seq35909 Length=710 Score = 86.0 bits (94), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 4/135 (3%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| || | | |||| |||||| ||||||||| Sbjct 588 CTTTACAAGCGGCATTGCCCTTCTT-CACTCATGTGATATTGT-TGGATCGGGCTTTCGC 531 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 |||||| ||| ||||| || || |||| | ||| ||||||||| ||||| ||| | || Sbjct 530 CCATTGATCAAGATTCCTCATTGTTGCCCCTCGTGGGAGTCTGGGTCGTGTTTCAATCCC 471 Query 119 AGTGTGACTGATCAT 133 | | || || ||||| Sbjct 470 AATATGGCTTATCAT 456 >seq532599 Length=442 Score = 73.4 bits (80), Expect = 8e-11 Identities = 63/78 (81%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 117 CCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTAC 176 ||||| || ||||||||||||| |||||| || ||||| || ||||| ||| ||| Sbjct 201 CCAGTATGGCTGATCATCCTCTGGGACCAGCTATGGATCATCATTTTGGTAAGCTATTGT 260 Query 177 CTCACCAACTAGCTAATC 194 |||||||| ||||||||| Sbjct 261 CTCACCAATTAGCTAATC 278 >seq36958 Length=443 Score = 73.4 bits (80), Expect = 8e-11 Identities = 63/78 (81%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 117 CCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTAC 176 |||||||| ||||||||||||| |||||| || ||||| || | ||| ||| ||| Sbjct 243 CCAGTGTGGCTGATCATCCTCTTGGACCAGCTATGGATCATCATTTCGGTAAGCTATTGT 184 Query 177 CTCACCAACTAGCTAATC 194 |||||||| ||||||||| Sbjct 183 CTCACCAATTAGCTAATC 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1063894340000