Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17]
756,125 sequences; 432,755,284 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq880 181 2e-43
seq511650 167 5e-39
seq553357 161 2e-37
seq595140 156 9e-36
seq102179 140 7e-31
seq265423 131 4e-28
seq640505 127 4e-27
seq555976 111 3e-22
seq131160 111 3e-22
seq755847 102 2e-19
seq482562 98.7 2e-18
seq630980 96.9 7e-18
seq671043 89.7 1e-15
seq275573 89.7 1e-15
seq726033 87.8 4e-15
seq35909 86.0 1e-14
seq532599 73.4 8e-11
seq36958 73.4 8e-11
>seq880
Length=1136
Score = 181 bits (200), Expect = 2e-43
Identities = 152/184 (83%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 14 AGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATT 73
|| |||||| || | |||||| ||||| || |||| |||||||||||||| || |||
Sbjct 426 AGGCCTTCTATCTC-CACGCGACATTG-CTCCATCAAGCTTTCGCCCATTGCGAAAAATT 369
Query 74 CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCAT 133
||||| |||| ||||||||||||| |||| |||||||||| | |||||| |||||||
Sbjct 368 CCCCATTGCTATCTCCCGTAGGAGTTTGGATTGTGTCTCAGTCCTAGTGTGGTTGATCAT 309
Query 134 CCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193
||||||||||||| ||| |||||||| ||||| || ||| ||||||||||||||||||
Sbjct 308 CCTCTCAGACCAGCTACTGATCGTCGTATTGGTAAGATATTGCCTCACCAACTAGCTAAT 249
Query 194 CCGA 197
| ||
Sbjct 248 CAGA 245
>seq511650
Length=600
Score = 167 bits (184), Expect = 5e-39
Identities = 146/179 (82%), Gaps = 2/179 (1%)
Strand=Plus/Plus
Query 19 TTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCA 78
|||| || | |||||| ||||| || |||||| ||||||||||||| || | ||||||
Sbjct 175 TTCTATCTC-CACGCGACATTG-CTCCATCAGGATTTCGCCCATTGTGAAAAACTCCCCA 232
Query 79 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCT 138
|||| ||||||||||||| |||| |||||||||| | |||||| |||||||| |||
Sbjct 233 TTGCTATCTCCCGTAGGAGTTTGGATTGTGTCTCAGTACTAGTGTGGTTGATCATCTTCT 292
Query 139 CAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA 197
|||||||| ||| |||| ||| ||||| || ||| ||||||||||||||||||| ||
Sbjct 293 CAGACCAGCTACTGATCATCGTATTGGTAAGATATTGCCTCACCAACTAGCTAATCAGA 351
>seq553357
Length=280
Score = 161 bits (178), Expect = 2e-37
Identities = 153/194 (79%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 25 CACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTG 84
||| |||||| |||| ||||||| |||||||||||||||||||| ||||||||| |||
Sbjct 280 CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACGACTG 222
Query 85 CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACC 144
|| ||||| |||||| || ||||||||||| |||||||| ||||||||| |||||
Sbjct 221 CCCCCCGTGGGAGTCCGGGACGTGTCTCAGTCCCAGTGTGGCTGATCATCTGAAAAGACC 162
Query 145 AGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGC 204
|| || | || | ||||| |||| |||||| |||||||| ||||| | | ||||
Sbjct 161 AGCTAAGCAT-----CATTGGTCAGCCTTTACCTGACCAACTACCTAATACTATGCAGGC 107
Query 205 TCATCTGATAGCGC 218
||||| | |||||
Sbjct 106 TCATCAAACAGCGC 93
>seq595140
Length=218
Score = 156 bits (172), Expect = 9e-36
Identities = 117/132 (89%), Gaps = 4/132 (3%)
Strand=Plus/Plus
Query 71 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGT-CTCAGTTCCAGT-GTGACTG 128
|||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||| |||
Sbjct 3 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTACTCAGTCCCAGTAGTGGCTG 62
Query 129 ATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAG-CCATTACCTCACCAACTA 187
||||||||||| |||||| ||| |||| |||||||||| || | ||| ||||||||||||
Sbjct 63 ATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGACTATTGCCTCACCAACTA 122
Query 188 G-CTAATCCGAC 198
| |||||| |||
Sbjct 123 GTCTAATCAGAC 134
>seq102179
Length=1915
Score = 140 bits (154), Expect = 7e-31
Identities = 129/162 (80%), Gaps = 1/162 (1%)
Strand=Plus/Plus
Query 36 CATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGG 95
||||| || |||| | ||| |||||||| || ||||||||||| || ||| ||||
Sbjct 1504 CATTG-CTCCATCAAGATTTTGCCCATTGCGAAAAATTCCCCACTGTTGTCTCTCGTAAA 1562
Query 96 AGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATC 155
| ||| | ||||||||| | |||||||| ||||||||||||||||| || ||| ||||
Sbjct 1563 ATTCTAGGTCGTGTCTCAATCCCAGTGTGGTTGATCATCCTCTCAGACTAGCTACCGATC 1622
Query 156 GTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA 197
| |||||||| ||| ||| |||||||||||||||||| ||
Sbjct 1623 ATTGCCTTGGTAAGCTATTGTCTCACCAACTAGCTAATCAGA 1664
>seq265423
Length=261
Score = 131 bits (144), Expect = 4e-28
Identities = 120/152 (79%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 46 ATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACC 105
|||| |||||| ||| ||| | |||||||||| |||||||| ||||||||| | |
Sbjct 252 ATCAAGCTTTCACCCCTTGCAGAGAATTCCCCACTTTTGCCTCCCATAGGAGTCTAGGTC 193
Query 106 GTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGG 165
||||| ||| ||| |||| |||||||| | ||||||||| || |||| |||||||
Sbjct 192 ATGTCTTAGTCCCAATGTGTCTGATCATGCCCTCAGACCAACTATTGATCATCGCCTTAA 133
Query 166 TGAGCCATTACCTCACCAACTAGCTAATCCGA 197
| ||| ||| ||||||||||||||||||| ||
Sbjct 132 TAAGCTATTGCCTCACCAACTAGCTAATCAGA 101
>seq640505
Length=2646
Score = 127 bits (140), Expect = 4e-27
Identities = 117/148 (79%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 46 ATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACC 105
||||||||||| ||||||| || ||||||||||| |||||| ||| |||| |||
Sbjct 24 ATCAGGCTTTCTCCCATTGCAGAAAATTCCCCACTGTTGCCTCTTGTAAGAGTTTGGGTT 83
Query 106 GTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGG 165
|||||||||| | |||||| || ||||||||||| ||| | ||| ||| || ||||||
Sbjct 84 GTGTCTCAGTCCTAGTGTGGCTAATCATCCTCTCGGACTATCTACTGATTATCACCTTGG 143
Query 166 TGAGCCATTACCTCACCAACTAGCTAAT 193
| | |||||||| ||||||| |||||
Sbjct 144 TAAATTATTACCTCGCCAACTAACTAAT 171
>seq555976
Length=593
Score = 111 bits (122), Expect = 3e-22
Identities = 81/94 (86%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 105 CGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTG 164
||||||||||| ||||||| |||||||||||||||||||| ||| |||| |||| |||
Sbjct 328 CGTGTCTCAGTCTCAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCATCGCTTTG 387
Query 165 GTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|| || ||| ||||||||||||||||||| |||
Sbjct 388 GTAAGTTATTGCCTCACCAACTAGCTAATCAGAC 421
>seq131160
Length=423
Score = 111 bits (122), Expect = 3e-22
Identities = 120/158 (76%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 52 CTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCT 111
|| ||||||||||||||| ||||||||||||| | ||| | ||||||||| |||||
Sbjct 22 CTGTCGCCCATTGTCCAAGATTCCCCACTGCTATCCCCCATGGGAGTCTGGGT--TGTCT 79
Query 112 CAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCC 171
|| | ||| |||||||||||||| ||| || || | ||| | | |||||| ||||
Sbjct 80 CAATCCCAAAGTGACTGATCATCCGAAAAGATCAACTAAGCATCATTGGCTTGGTTAGCC 139
Query 172 ATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATC 209
| |||| ||||||| ||||| || |||||||||
Sbjct 140 TTGACCTGGCCAACTACCTAATATTACACAGGCTCATC 177
>seq755847
Length=781
Score = 102 bits (112), Expect = 2e-19
Identities = 118/158 (75%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 52 CTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCT 111
|| ||||||||||||||| ||||||||||||| || || | |||||||| | |||||
Sbjct 760 CTGTCGCCCATTGTCCAAGATTCCCCACTGCTACCCACCATGGGAGTCTGAGC--TGTCT 703
Query 112 CAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCC 171
|| | |||||||| ||||||||| | | || || ||| | | |||||| ||||
Sbjct 702 CAATCCCAGTGTGGCTGATCATCAGAAAAAATCAACTAAACATCATTGGCTTGGTCAGCC 643
Query 172 ATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATC 209
| |||| |||||||| ||||| || | |||||||
Sbjct 642 TTGACCTGACCAACTACCTAATATTACACATGCTCATC 605
>seq482562
Length=498
Score = 98.7 bits (108), Expect = 2e-18
Identities = 100/128 (78%), Gaps = 3/128 (2%)
Strand=Plus/Plus
Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTC--AGTTCCAGTGTGA 125
|| ||| ||| |||| | ||| ||| |||||||| ||||||| |||| || | ||
Sbjct 169 AAAATTTTCCATTGCTACTTCC-GTATGAGTCTGGGTTGTGTCTCTTAGTTTCAATATGG 227
Query 126 CTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAAC 185
||||||||||||||||||| ||| |||| ||| |||| | || |||||||| ||||||
Sbjct 228 TTGATCATCCTCTCAGACCACTTAATGATCATCGTCTTGATAAGTCATTACCTTACCAAC 287
Query 186 TAGCTAAT 193
||| ||||
Sbjct 288 TAGTTAAT 295
>seq630980
Length=860
Score = 96.9 bits (106), Expect = 7e-18
Identities = 73/86 (85%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 113 AGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCA 172
||| |||||||| ||||||||||||||||| ||| ||| |||| ||| | ||| ||| |
Sbjct 359 AGTCCCAGTGTGGCTGATCATCCTCTCAGATCAGCTACTGATCATCGTGTAGGTAAGCTA 300
Query 173 TTACCTCACCAACTAGCTAATCCGAC 198
|| ||||||||||||||||||| |||
Sbjct 299 TTGCCTCACCAACTAGCTAATCAGAC 274
>seq671043
Length=2435
Score = 89.7 bits (98), Expect = 1e-15
Identities = 93/121 (77%), Gaps = 2/121 (2%)
Strand=Plus/Minus
Query 80 TGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTC 139
|| || ||||||||||||||| | |||||||||| ||| ||| ||||||| ||||
Sbjct 1671 TGTTGTCTCCCGTAGGAGTCTAGGTAGTGTCTCAGTCCCAAGGTGGTTGATCATTCTCTT 1612
Query 140 AGACCAGTTACGGATCGTCGCCTTGGTGAGCC--ATTACCTCACCAACTAGCTAATCCGA 197
||| || || || | || |||||| |||| ||| ||||||||| ||||||||| ||
Sbjct 1611 AGATCACATATTGACCATCATCTTGGTAAGCCATATTGCCTCACCAAGTAGCTAATCAGA 1552
Query 198 C 198
|
Sbjct 1551 C 1551
>seq275573
Length=391
Score = 89.7 bits (98), Expect = 1e-15
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 117 CCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTAC 176
|||||||| |||||||||||||| || || ||| |||| |||||||||| ||| |||
Sbjct 391 CCAGTGTGGTTGATCATCCTCTCAAACTAGCTACTGATCATCGCCTTGGTAAGCTATTGT 332
Query 177 CTCACCAACTAGCTAAT 193
|||||||||||||||||
Sbjct 331 CTCACCAACTAGCTAAT 315
>seq726033
Length=5078
Score = 87.8 bits (96), Expect = 4e-15
Identities = 115/158 (73%), Gaps = 1/158 (1%)
Strand=Plus/Plus
Query 36 CATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGG 95
||||| || || ||||||| |||||||| || ||| |||| || || ||||| ||||
Sbjct 1164 CATTG-CTCCATTAGGCTTTTACCCATTGTGGAAAATTTCCCATTGTTGTCTCCCATAGG 1222
Query 96 AGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATC 155
||| | | | || | ||| |||||| | |||||||||||| ||| | || |||
Sbjct 1223 AGTTTAGGCATTGCTTTAGTCTTAGTGTGGTTTATCATCCTCTCACACCCGGTATTGATT 1282
Query 156 GTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193
|| |||||| | | | ||| || | ||||||||||||
Sbjct 1283 GTTGCCTTGATAAACTATTGTCTTATCAACTAGCTAAT 1320
>seq35909
Length=710
Score = 86.0 bits (94), Expect = 1e-14
Identities = 102/135 (76%), Gaps = 4/135 (3%)
Strand=Plus/Minus
Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58
|||||||| | | | | ||||||| ||| || | | |||| |||||| |||||||||
Sbjct 588 CTTTACAAGCGGCATTGCCCTTCTT-CACTCATGTGATATTGT-TGGATCGGGCTTTCGC 531
Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118
|||||| ||| ||||| || || |||| | ||| ||||||||| ||||| ||| | ||
Sbjct 530 CCATTGATCAAGATTCCTCATTGTTGCCCCTCGTGGGAGTCTGGGTCGTGTTTCAATCCC 471
Query 119 AGTGTGACTGATCAT 133
| | || || |||||
Sbjct 470 AATATGGCTTATCAT 456
>seq532599
Length=442
Score = 73.4 bits (80), Expect = 8e-11
Identities = 63/78 (81%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 117 CCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTAC 176
||||| || ||||||||||||| |||||| || ||||| || ||||| ||| |||
Sbjct 201 CCAGTATGGCTGATCATCCTCTGGGACCAGCTATGGATCATCATTTTGGTAAGCTATTGT 260
Query 177 CTCACCAACTAGCTAATC 194
|||||||| |||||||||
Sbjct 261 CTCACCAATTAGCTAATC 278
>seq36958
Length=443
Score = 73.4 bits (80), Expect = 8e-11
Identities = 63/78 (81%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 117 CCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTAC 176
|||||||| ||||||||||||| |||||| || ||||| || | ||| ||| |||
Sbjct 243 CCAGTGTGGCTGATCATCCTCTTGGACCAGCTATGGATCATCATTTCGGTAAGCTATTGT 184
Query 177 CTCACCAACTAGCTAATC 194
|||||||| |||||||||
Sbjct 183 CTCACCAATTAGCTAATC 166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1063894340000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |