Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq583453 114 5e-23 seq408656 113 2e-22 seq307084 109 2e-21 seq205838 109 2e-21 seq724289 100 1e-18 seq98063 98.7 4e-18 seq45134 96.9 1e-17 seq557120 95.1 4e-17 seq86428 91.5 5e-16 seq48145 87.8 6e-15 seq710387 80.6 1e-12 >seq583453 Length=287 Score = 114 bits (126), Expect = 5e-23 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 471 GTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTT 530 |||||| || ||||||||||||||| ||||| ||||||| | ||||||||| ||| | Sbjct 274 GTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCATCATTCCCTCACAGTATTA 215 Query 531 GTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 | |||||||||||||| |||||||||||| ||| |||||||| | ||||||||| Sbjct 214 CTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGTAAGGTGGTCCTTGCTGATTCACAC 155 Query 591 G 591 | Sbjct 154 G 154 >seq408656 Length=331 Score = 113 bits (124), Expect = 2e-22 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||| || |||||||||||||| | ||| ||||||||| ||||||||| ||||| Sbjct 147 GGTTTCATGTTCTATTTCACTCCCCAATGGAGGTTCTTTTCACCATTCCCTCACTGTACT 206 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589 || |||||||||||||| |||||| ||||| |||| |||||| | | |||||||| Sbjct 207 AGTTCGCTATCGGTCACCTAGGAGTGTTTAGCCTTACAAGGTGGTTCTTGCTGATTCACA 266 >seq307084 Length=221 Score = 109 bits (120), Expect = 2e-21 Identities = 138/188 (73%), Gaps = 15/188 (8%) Strand=Plus/Plus Query 391 TCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTC 450 |||| |||| ||||||||| | |||||| |||| | || | | || ||| Sbjct 46 TCGCCGGCTGATTCTTCAACAAGCACGCGGTCA----GAGCC-------CTCGTCTCCTC 94 Query 451 CGACGGATTGTAGGCAC--ATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTT 508 | || | ||| || || ||||||||| || |||||||||||| || ||||| |||| Sbjct 95 CCACTGCTTG--GGAACTTATGGTTTCATGTTCTATTTCACTCCTCGATGGGGGTTCTTT 152 Query 509 TCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACG 568 ||||| || ||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct 153 TCACCCTTTCCTCACGATACTACTTCGCTATCGGTCACCCAGAAGTATTTAGCCTTGCAA 212 Query 569 GGTGGTCC 576 |||||||| Sbjct 213 GGTGGTCC 220 >seq205838 Length=480 Score = 109 bits (120), Expect = 2e-21 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||| || |||||||||||||| ||||| ||||||| | ||| ||||||||||| Sbjct 334 GGTTTCATGTTCTATTTCACTCCCCAATGGGGGTTCTTTTCATCCTTCTCTCACGGTACT 275 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589 || |||||||||||||| | |||||||||| ||| |||||| | | |||||||| Sbjct 274 AGTTCGCTATCGGTCACCTAAGAGTATTTAGCCTTTCAAGGTGGTTCTTGCTGATTCACA 215 >seq724289 Length=1343 Score = 100 bits (110), Expect = 1e-18 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 152 ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTC 211 |||| ||||||||||||||| | | |||||||| |||| |||||||| || |||| || Sbjct 826 ATTTTGGGGAGAACCAGCTAGCTCTAAGTTTGAGTGGCATTTCACCCTTAATCACAACTC 885 Query 212 ATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCA 271 || | || | | |||||| | ||| | || | |||| || ||| | |||| |||||| Sbjct 886 ATTCGCTTATTCTTCAACATCAGTTGATTTTGACCTCTACTTGGTTTCACCCAAGCTTCA 945 Query 272 ACCTGCCCATGGATAGATCACTTCGCTTCGGGT 304 ||| ||| ||| ||||||| | ||||||| Sbjct 946 TCCTAGTTATGAATATATCACTTAGGTTCGGGT 978 >seq98063 Length=204 Score = 98.7 bits (108), Expect = 4e-18 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||| || |||||||||||| || ||||| ||||||||| || ||||| | |||| Sbjct 97 GGTTTCATGTTCTATTTCACTCCTCGATGGGGGTTCTTTTCACCCTTTCCTCATGATACT 156 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCC 576 | |||||||||||||| || ||||||||| ||| |||||||| Sbjct 157 ACTTCGCTATCGGTCACCCAGAAGTATTTAGCCTTGCAAGGTGGTCC 203 >seq45134 Length=380 Score = 96.9 bits (106), Expect = 1e-17 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 136 CGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCA 195 |||||| ||| || |||||||||||||||||| ||| | | ||| || |||| ||||| Sbjct 133 CGCTGCGCCTCAACGCATTTCGGGGAGAACCAACTAGCTCTGGGTTCGAGTGGCATTTCA 74 Query 196 CCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251 |||||| ||||| |||| | || | | |||||| | ||| |||||| ||||||| Sbjct 73 CCCCTAACCACAATTCATTCGCTGATTCTTCAACATCAGTCAGTTCGGACCTCCAC 18 >seq557120 Length=752 Score = 95.1 bits (104), Expect = 4e-17 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 143 CCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTAT 202 ||| |||| |||||| |||||| | || | | | | ||| || || | ||||| || || Sbjct 520 CCTCAATGTATTTCGAGGAGAATCGGCCAGCTCTAGGTTCGAGTGACATTTCAACCTTAA 461 Query 203 CCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACC 262 ||| | ||||||||| | | |||||| | ||| ||||||| ||| ||| || | ||| Sbjct 460 CCATAACTCATCCCCTGATTCTTCAACATCAGTCGGTTCGGACCTTCACTTAGTTTCACC 401 Query 263 CGCGCTTCAACCTGCCCATGGATAGATCAC 292 | ||||| |||| |||||||||||||| Sbjct 400 CAAACTTCATCCTGATCATGGATAGATCAC 371 >seq86428 Length=1267 Score = 91.5 bits (100), Expect = 5e-16 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||| | ||||||||| || | | ||| ||||||||| ||||||||||||||| Sbjct 720 GGTTTCATATTTTATTTCACTTCCTGATGGAGGTTCTTTTCACCCTTCCCTCACGGTACT 779 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589 | ||||||||||||| | || ||||||| || ||||||| | |||||||| Sbjct 780 ACTTTGCTATCGGTCACCCATGAATATTTAGCTTTGTAAGGTGGTCATTGCTGATTCACA 839 Query 590 CGAAATTTCA 599 ||| ||| || Sbjct 840 CGAGATTCCA 849 >seq48145 Length=604 Score = 87.8 bits (96), Expect = 6e-15 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 472 TTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTG 531 ||||| || ||||||||||| ||| |||| ||||||||| || ||| |||||| || Sbjct 284 TTTCATGTTCTATTTCACTCTCCGATGAGGGTTCTTTTCACCATTTCCTTACGGTATTTC 343 Query 532 TCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACG 591 | | ||||| ||| |||||||||||||| ||| |||||| | |||||||| | Sbjct 344 TTTGTTATCGATCATCAAGGAGTATTTAGTCTTGTAAAGTGGTCATTACTGATTCACATG 403 Query 592 AAATTTCA 599 | ||| || Sbjct 404 AGATTCCA 411 >seq710387 Length=1807 Score = 80.6 bits (88), Expect = 1e-12 Identities = 111/154 (72%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 139 TGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCC 198 ||| ||| || ||||||| ||||||| ||||| | ||| || || | |||||||| Sbjct 545 TGCGCCTCAACGCATTTCAAGGAGAACTAGCTAGCTTTGGGTTCGAGTGACATTTCACCC 486 Query 199 CTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCT 258 || ||||| |||||| || | |||||||| | | | | || || |||| || | Sbjct 485 -TAACCACAACTCATCCACTGACTTTTCAACATCACTCGATTTGGGATACCACTTAGTTT 427 Query 259 TACCCGCGCTTCAACCTGCCCATGGATAGATCAC 292 |||| |||||| |||| |||||||||||||| Sbjct 426 CACCCAAGCTTCATCCTGGTCATGGATAGATCAC 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1803856672000