Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq880 147 4e-33 seq595140 140 6e-31 seq102179 140 6e-31 seq511650 129 1e-27 seq265423 116 7e-24 seq640505 113 9e-23 seq553357 100 6e-19 seq555976 95.1 2e-17 seq275573 82.4 2e-13 seq755847 73.4 8e-11 seq131160 73.4 8e-11 >seq880 Length=1136 Score = 147 bits (162), Expect = 4e-33 Identities = 213/298 (71%), Gaps = 16/298 (5%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| ||||| | |||| ||||||| | || || ||||| |||| ||||||||||||| | Sbjct 401 GCTCCATCAAGCTTTCGCCCATTGCGAAAAATTCCCCATTGCTATCTCCCGTAGGAGTTT 342 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || |||||||||||| | ||||| | ||| |||||||| || ||||| |||||||| Sbjct 341 GGATTGTGTCTCAGTCCTAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCGTCGT 282 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 ||||| | |||| ||||||||||| |||||| | |||||||| || | ||| Sbjct 281 ATTGGTAAGATATTGCCTCACCAACTAGCTAATCAGAAGCGAGCCCCTCATCGGGCG--G 224 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246 | || || | ||| ||||| | | || ||||||||| |||||||| Sbjct 223 ATTCCTT---------CTTTTGC--TCCTCAGCC--TACAGGGTATTAGCAATCGTTTCC 177 Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || ||| |||| || || || ||||| || | | ||||| || |||| |||||| Sbjct 176 AACTGTTGTTCCCATCCCAAGGGAAGGTT-CTTATGCATTACTGACTCGTCTGCCACT 120 >seq595140 Length=218 Score = 140 bits (154), Expect = 6e-31 Identities = 120/143 (84%), Gaps = 4/143 (3%) Strand=Plus/Plus Query 37 ATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT-CTCAGTCCCAAT-GTGGCCG 94 || |||||||||||||||||||||||||||||||||||| |||||||||| | ||||| | Sbjct 3 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTACTCAGTCCCAGTAGTGGCTG 62 Query 95 TTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT-GGGCTATTATCTCACCAACTA 153 ||| |||||| | || ||||| |||| ||| |||||| | ||||| ||||||||||| Sbjct 63 ATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGACTATTGCCTCACCAACTA 122 Query 154 -CCTAATCGGCCGCGAGCCCATC 175 |||||| | ||||||||| || Sbjct 123 GTCTAATCAGACGCGAGCCCCTC 145 >seq102179 Length=1915 Score = 140 bits (154), Expect = 6e-31 Identities = 211/299 (71%), Gaps = 16/299 (5%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| ||||| | ||| ||||||| | || || |||||||| || ||| |||| | ||| Sbjct 1508 GCTCCATCAAGATTTTGCCCATTGCGAAAAATTCCCCACTGTTGTCTCTCGTAAAATTCT 1567 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || ||||||||| ||||| ||||| | ||| |||||||| | |||||||||| | | Sbjct 1568 AGGTCGTGTCTCAATCCCAGTGTGGTTGATCATCCTCTCAGACTAGCTACCGATCATTGC 1627 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 |||||| |||||| |||||||||||| |||||| | | ||||||||| | ||| Sbjct 1628 CTTGGTAAGCTATTGTCTCACCAACTAGCTAATCAGATGTGAGCCCATCCTCGGGCG--- 1684 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246 || || | || | ||| | || | ||||||||| || ||||| Sbjct 1685 GATTTTCCCT-----TTTG-------CTTCTTAGCCTACGTGGTATTAGCAGTCTTTTCC 1732 Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTA 305 | ||| |||| ||| || | |||||| || ||| |||||||||| |||| ||||| Sbjct 1733 AGTTGTTGTTCCCCTCCCAAGGACAGGTT-CTTACGCATTACTCACCCATCCGACACTA 1790 >seq511650 Length=600 Score = 129 bits (142), Expect = 1e-27 Identities = 130/169 (77%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| ||||||| |||| ||||||||| || | ||||| |||| ||||||||||||| | Sbjct 195 GCTCCATCAGGATTTCGCCCATTGTGAAAAACTCCCCATTGCTATCTCCCGTAGGAGTTT 254 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || |||||||||| | | ||||| | ||| | |||||| || ||||| |||| ||| Sbjct 255 GGATTGTGTCTCAGTACTAGTGTGGTTGATCATCTTCTCAGACCAGCTACTGATCATCGT 314 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 ||||| | |||| ||||||||||| |||||| | | |||||| || Sbjct 315 ATTGGTAAGATATTGCCTCACCAACTAGCTAATCAGAAGAGAGCCCCTC 363 >seq265423 Length=261 Score = 116 bits (128), Expect = 7e-24 Identities = 132/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| ||||| | |||| ||| ||| | || ||||||| |||||||| ||||||||| Sbjct 257 GCTCCATCAAGCTTTCACCCCTTGCAGAGAATTCCCCACTTTTGCCTCCCATAGGAGTCT 198 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || | ||||| |||||||||||| | | ||| | ||||| || ||| |||| ||| Sbjct 197 AGGTCATGTCTTAGTCCCAATGTGTCTGATCATGCCCTCAGACCAACTATTGATCATCGC 138 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCG 183 ||| | |||||| ||||||||||| |||||| | || ||||| || || |||| Sbjct 137 CTTAATAAGCTATTGCCTCACCAACTAGCTAATCAGATGCAAGCCCCTCCTTGAGCG 81 >seq640505 Length=2646 Score = 113 bits (124), Expect = 9e-23 Identities = 128/172 (74%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| ||||||| |||| ||||||| || || |||||||| |||||| ||| |||| | Sbjct 19 GCTCCATCAGGCTTTCTCCCATTGCAGAAAATTCCCCACTGTTGCCTCTTGTAAGAGTTT 78 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||| |||||||||||| | |||||| ||| |||||| | | |||| ||| || Sbjct 79 GGGTTGTGTCTCAGTCCTAGTGTGGCTAATCATCCTCTCGGACTATCTACTGATTATCAC 138 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTT 178 |||||| ||||| ||| ||||||| ||||| | | ||||||| |||| Sbjct 139 CTTGGTAAATTATTACCTCGCCAACTAACTAATAAGACAGGAGCCCAACTTT 190 >seq553357 Length=280 Score = 100 bits (110), Expect = 6e-19 Identities = 114/153 (75%), Gaps = 5/153 (3%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || |||||| ||||| ||||| |||||| Sbjct 265 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACGACTGCCCCCCGTGGGAGTCC 206 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||| ||||||||||||||| |||||| | ||| | || || |||| ||| Sbjct 205 GGGACGTGTCTCAGTCCCAGTGTGGCTGATCATCTGAAAAGACCAGCTAAGCATC----- 151 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 ||||| || ||| || |||||||||||||| Sbjct 150 ATTGGTCAGCCTTTACCTGACCAACTACCTAAT 118 >seq555976 Length=593 Score = 95.1 bits (104), Expect = 2e-17 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 71 CGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTG 130 |||||||||||| || ||||| | ||| |||||||| || ||||| |||| ||| ||| Sbjct 328 CGTGTCTCAGTCTCAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCATCGCTTTG 387 Query 131 GTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 || | |||| ||||||||||| |||||| | ||||||||| || Sbjct 388 GTAAGTTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 432 >seq275573 Length=391 Score = 82.4 bits (90), Expect = 2e-13 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 83 CCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTAT 142 ||| ||||| | ||| ||||||| | ||||| |||| ||| |||||| |||||| | Sbjct 391 CCAGTGTGGTTGATCATCCTCTCAAACTAGCTACTGATCATCGCCTTGGTAAGCTATTGT 332 Query 143 CTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 ||||||||||| ||||| | |||||||||||| Sbjct 331 CTCACCAACTAGCTAATTAGACGCGAGCCCATC 299 >seq755847 Length=781 Score = 73.4 bits (80), Expect = 8e-11 Identities = 100/139 (72%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 21 TCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 80 || |||||||| ||| || |||||||||| || || | |||||||| || ||||||| Sbjct 757 TCGCCCATTGTCCAAGATTCCCCACTGCTACCCACCATGGGAGTCTGAGC--TGTCTCAA 700 Query 81 TCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATT 140 ||||| |||||| | ||| | | | ||| ||| | |||||||| || | Sbjct 699 TCCCAGTGTGGCTGATCATCAGAAAAAATCAACTAAACATCATTGGCTTGGTCAGCCTTG 640 Query 141 ATCTCACCAACTACCTAAT 159 | || |||||||||||||| Sbjct 639 ACCTGACCAACTACCTAAT 621 >seq131160 Length=423 Score = 73.4 bits (80), Expect = 8e-11 Identities = 100/139 (72%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 21 TCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 80 || |||||||| ||| || |||||||||| | ||| | |||||||||| ||||||| Sbjct 25 TCGCCCATTGTCCAAGATTCCCCACTGCTATCCCCCATGGGAGTCTGGGT--TGTCTCAA 82 Query 81 TCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATT 140 |||||| ||| | | ||| || || | ||| ||| | |||||||| || | Sbjct 83 TCCCAAAGTGACTGATCATCCGAAAAGATCAACTAAGCATCATTGGCTTGGTTAGCCTTG 142 Query 141 ATCTCACCAACTACCTAAT 159 | || ||||||||||||| Sbjct 143 ACCTGGCCAACTACCTAAT 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 990850848000