Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17]
756,125 sequences; 432,755,284 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq880 147 4e-33
seq595140 140 6e-31
seq102179 140 6e-31
seq511650 129 1e-27
seq265423 116 7e-24
seq640505 113 9e-23
seq553357 100 6e-19
seq555976 95.1 2e-17
seq275573 82.4 2e-13
seq755847 73.4 8e-11
seq131160 73.4 8e-11
>seq880
Length=1136
Score = 147 bits (162), Expect = 4e-33
Identities = 213/298 (71%), Gaps = 16/298 (5%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| ||||| | |||| ||||||| | || || ||||| |||| ||||||||||||| |
Sbjct 401 GCTCCATCAAGCTTTCGCCCATTGCGAAAAATTCCCCATTGCTATCTCCCGTAGGAGTTT 342
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
|| |||||||||||| | ||||| | ||| |||||||| || ||||| ||||||||
Sbjct 341 GGATTGTGTCTCAGTCCTAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCGTCGT 282
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186
||||| | |||| ||||||||||| |||||| | |||||||| || | |||
Sbjct 281 ATTGGTAAGATATTGCCTCACCAACTAGCTAATCAGAAGCGAGCCCCTCATCGGGCG--G 224
Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246
| || || | ||| ||||| | | || ||||||||| ||||||||
Sbjct 223 ATTCCTT---------CTTTTGC--TCCTCAGCC--TACAGGGTATTAGCAATCGTTTCC 177
Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304
|| ||| |||| || || || ||||| || | | ||||| || |||| ||||||
Sbjct 176 AACTGTTGTTCCCATCCCAAGGGAAGGTT-CTTATGCATTACTGACTCGTCTGCCACT 120
>seq595140
Length=218
Score = 140 bits (154), Expect = 6e-31
Identities = 120/143 (84%), Gaps = 4/143 (3%)
Strand=Plus/Plus
Query 37 ATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT-CTCAGTCCCAAT-GTGGCCG 94
|| |||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |
Sbjct 3 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTACTCAGTCCCAGTAGTGGCTG 62
Query 95 TTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT-GGGCTATTATCTCACCAACTA 153
||| |||||| | || ||||| |||| ||| |||||| | ||||| |||||||||||
Sbjct 63 ATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGACTATTGCCTCACCAACTA 122
Query 154 -CCTAATCGGCCGCGAGCCCATC 175
|||||| | ||||||||| ||
Sbjct 123 GTCTAATCAGACGCGAGCCCCTC 145
>seq102179
Length=1915
Score = 140 bits (154), Expect = 6e-31
Identities = 211/299 (71%), Gaps = 16/299 (5%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| ||||| | ||| ||||||| | || || |||||||| || ||| |||| | |||
Sbjct 1508 GCTCCATCAAGATTTTGCCCATTGCGAAAAATTCCCCACTGTTGTCTCTCGTAAAATTCT 1567
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
|| ||||||||| ||||| ||||| | ||| |||||||| | |||||||||| | |
Sbjct 1568 AGGTCGTGTCTCAATCCCAGTGTGGTTGATCATCCTCTCAGACTAGCTACCGATCATTGC 1627
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186
|||||| |||||| |||||||||||| |||||| | | ||||||||| | |||
Sbjct 1628 CTTGGTAAGCTATTGTCTCACCAACTAGCTAATCAGATGTGAGCCCATCCTCGGGCG--- 1684
Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246
|| || | || | ||| | || | ||||||||| || |||||
Sbjct 1685 GATTTTCCCT-----TTTG-------CTTCTTAGCCTACGTGGTATTAGCAGTCTTTTCC 1732
Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTA 305
| ||| |||| ||| || | |||||| || ||| |||||||||| |||| |||||
Sbjct 1733 AGTTGTTGTTCCCCTCCCAAGGACAGGTT-CTTACGCATTACTCACCCATCCGACACTA 1790
>seq511650
Length=600
Score = 129 bits (142), Expect = 1e-27
Identities = 130/169 (77%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| ||||||| |||| ||||||||| || | ||||| |||| ||||||||||||| |
Sbjct 195 GCTCCATCAGGATTTCGCCCATTGTGAAAAACTCCCCATTGCTATCTCCCGTAGGAGTTT 254
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
|| |||||||||| | | ||||| | ||| | |||||| || ||||| |||| |||
Sbjct 255 GGATTGTGTCTCAGTACTAGTGTGGTTGATCATCTTCTCAGACCAGCTACTGATCATCGT 314
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
||||| | |||| ||||||||||| |||||| | | |||||| ||
Sbjct 315 ATTGGTAAGATATTGCCTCACCAACTAGCTAATCAGAAGAGAGCCCCTC 363
>seq265423
Length=261
Score = 116 bits (128), Expect = 7e-24
Identities = 132/177 (75%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| ||||| | |||| ||| ||| | || ||||||| |||||||| |||||||||
Sbjct 257 GCTCCATCAAGCTTTCACCCCTTGCAGAGAATTCCCCACTTTTGCCTCCCATAGGAGTCT 198
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
|| | ||||| |||||||||||| | | ||| | ||||| || ||| |||| |||
Sbjct 197 AGGTCATGTCTTAGTCCCAATGTGTCTGATCATGCCCTCAGACCAACTATTGATCATCGC 138
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCG 183
||| | |||||| ||||||||||| |||||| | || ||||| || || ||||
Sbjct 137 CTTAATAAGCTATTGCCTCACCAACTAGCTAATCAGATGCAAGCCCCTCCTTGAGCG 81
>seq640505
Length=2646
Score = 113 bits (124), Expect = 9e-23
Identities = 128/172 (74%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| ||||||| |||| ||||||| || || |||||||| |||||| ||| |||| |
Sbjct 19 GCTCCATCAGGCTTTCTCCCATTGCAGAAAATTCCCCACTGTTGCCTCTTGTAAGAGTTT 78
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
||| |||||||||||| | |||||| ||| |||||| | | |||| ||| ||
Sbjct 79 GGGTTGTGTCTCAGTCCTAGTGTGGCTAATCATCCTCTCGGACTATCTACTGATTATCAC 138
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTT 178
|||||| ||||| ||| ||||||| ||||| | | ||||||| ||||
Sbjct 139 CTTGGTAAATTATTACCTCGCCAACTAACTAATAAGACAGGAGCCCAACTTT 190
>seq553357
Length=280
Score = 100 bits (110), Expect = 6e-19
Identities = 114/153 (75%), Gaps = 5/153 (3%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| ||| || |||| |||||||| ||| || |||||| ||||| ||||| ||||||
Sbjct 265 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACGACTGCCCCCCGTGGGAGTCC 206
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
||| ||||||||||||||| |||||| | ||| | || || |||| |||
Sbjct 205 GGGACGTGTCTCAGTCCCAGTGTGGCTGATCATCTGAAAAGACCAGCTAAGCATC----- 151
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159
||||| || ||| || ||||||||||||||
Sbjct 150 ATTGGTCAGCCTTTACCTGACCAACTACCTAAT 118
>seq555976
Length=593
Score = 95.1 bits (104), Expect = 2e-17
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 71 CGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTG 130
|||||||||||| || ||||| | ||| |||||||| || ||||| |||| ||| |||
Sbjct 328 CGTGTCTCAGTCTCAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCATCGCTTTG 387
Query 131 GTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
|| | |||| ||||||||||| |||||| | ||||||||| ||
Sbjct 388 GTAAGTTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 432
>seq275573
Length=391
Score = 82.4 bits (90), Expect = 2e-13
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 83 CCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTAT 142
||| ||||| | ||| ||||||| | ||||| |||| ||| |||||| |||||| |
Sbjct 391 CCAGTGTGGTTGATCATCCTCTCAAACTAGCTACTGATCATCGCCTTGGTAAGCTATTGT 332
Query 143 CTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
||||||||||| ||||| | ||||||||||||
Sbjct 331 CTCACCAACTAGCTAATTAGACGCGAGCCCATC 299
>seq755847
Length=781
Score = 73.4 bits (80), Expect = 8e-11
Identities = 100/139 (72%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 21 TCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 80
|| |||||||| ||| || |||||||||| || || | |||||||| || |||||||
Sbjct 757 TCGCCCATTGTCCAAGATTCCCCACTGCTACCCACCATGGGAGTCTGAGC--TGTCTCAA 700
Query 81 TCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATT 140
||||| |||||| | ||| | | | ||| ||| | |||||||| || |
Sbjct 699 TCCCAGTGTGGCTGATCATCAGAAAAAATCAACTAAACATCATTGGCTTGGTCAGCCTTG 640
Query 141 ATCTCACCAACTACCTAAT 159
| || ||||||||||||||
Sbjct 639 ACCTGACCAACTACCTAAT 621
>seq131160
Length=423
Score = 73.4 bits (80), Expect = 8e-11
Identities = 100/139 (72%), Gaps = 2/139 (1%)
Strand=Plus/Plus
Query 21 TCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 80
|| |||||||| ||| || |||||||||| | ||| | |||||||||| |||||||
Sbjct 25 TCGCCCATTGTCCAAGATTCCCCACTGCTATCCCCCATGGGAGTCTGGGT--TGTCTCAA 82
Query 81 TCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATT 140
|||||| ||| | | ||| || || | ||| ||| | |||||||| || |
Sbjct 83 TCCCAAAGTGACTGATCATCCGAAAAGATCAACTAAGCATCATTGGCTTGGTTAGCCTTG 142
Query 141 ATCTCACCAACTACCTAAT 159
| || |||||||||||||
Sbjct 143 ACCTGGCCAACTACCTAAT 161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 990850848000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |