Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq135086 131 4e-28 seq205801 111 4e-22 seq169463 73.4 9e-11 >seq135086 Length=399 Score = 131 bits (144), Expect = 4e-28 Identities = 114/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 || || |||||||||||||||||||||||||||| ||| |||||| | | |||||| || Sbjct 1 CTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGATGCTTCTAGGTAAACCTCTTG 60 Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378 |||||||| ||| | | || |||||| ||||||| || |||| |||||||| || | Sbjct 61 GTTGTCTATGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGAGGCCTTAGTTGGT 120 Query 379 GATCTGGGCTGTTTCCCTCTCG 400 ||| ||| ||||||| ||||| Sbjct 121 GATTCGGGTTGTTTCCTTCTCG 142 >seq205801 Length=667 Score = 111 bits (122), Expect = 4e-22 Identities = 109/138 (79%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||| | ||| |||| |||||| | ||| ||||||| | |||| || || Sbjct 265 CCACAGCTTCGACAGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAACACTAGATCA 322 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 ||||||||||| ||||||||||||||||| |||||| | || |||||||| | ||||| Sbjct 323 ATGAGCTATTACACACTCTTTCAAGGATGGTTGCTTCTAGGCAAACCTCCTTGCTGTCTC 382 Query 327 CGCAACTCCACATCCTTT 344 ||| | | || |||||| Sbjct 383 TGCACCCCTACCTCCTTT 400 >seq169463 Length=446 Score = 73.4 bits (80), Expect = 9e-11 Identities = 76/97 (78%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||| ||| || |||| ||| || | ||| |||| | | |||| || || Sbjct 104 CCACAGCTTTGGCAAATTGCTTA-GCCTCG-TCCATCTTCGGTGTAAGAGCACTCGATCA 47 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTC 303 |||||||||||||||||||||||||| ||| |||||| Sbjct 46 GTGAGCTATTACGCACTCTTTCAAGGGTGGATGCTTC 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1168695872000