Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17]
756,125 sequences; 432,755,284 total letters
Query= AAMG01001756.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq533759 93.3 8e-17
>seq533759
Length=556
Score = 93.3 bits (102), Expect = 8e-17
Identities = 182/268 (68%), Gaps = 6/268 (2%)
Strand=Plus/Plus
Query 5 TCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGGGAGA 64
||| ||||| ||| | ||||| || ||||||||| |||| || || | |||| ||
Sbjct 284 TCAGTGTCCGAGGTCGTGTGTCGGTGTGGGTAAAGATGGGAAGCTGTTTAGCTGGGCCGA 343
Query 65 GTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCTTGGT 124
|| ||| || || || || || || | || || | || || |||| | |
Sbjct 344 ATCGGACACGGCGGTGGGCGTGGGGGCTTGTGCAGTCGACTTAGGAGACTGGACACTTTT 403
Query 125 TACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACAAAAA 184
||||| |||| ||| || || || ||||| |||||||| || || | | || | ||
Sbjct 404 GACCGGCTCGGCTTACCAGGGTGCACCACAAGGGTTCTTTTTGGTGGAGAGAAA--AGAA 461
Query 185 GGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGT 244
||| |||||| | |||||| | || || || |||| |||||| ||||||||
Sbjct 462 GGA----CAAAATGGGAAATTGGAGAGAATAGAAGTGGGGGATGGATTTTCGGGATTTGT 517
Query 245 GCAATCTGGATGCTGTGTGGAGATCTGA 272
||||| || || || ||||||||||||
Sbjct 518 ACAATCAGGGTGTTGCGTGGAGATCTGA 545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 911455748000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |