Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq533759 93.3 8e-17 >seq533759 Length=556 Score = 93.3 bits (102), Expect = 8e-17 Identities = 182/268 (68%), Gaps = 6/268 (2%) Strand=Plus/Plus Query 5 TCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGGGAGA 64 ||| ||||| ||| | ||||| || ||||||||| |||| || || | |||| || Sbjct 284 TCAGTGTCCGAGGTCGTGTGTCGGTGTGGGTAAAGATGGGAAGCTGTTTAGCTGGGCCGA 343 Query 65 GTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCTTGGT 124 || ||| || || || || || || | || || | || || |||| | | Sbjct 344 ATCGGACACGGCGGTGGGCGTGGGGGCTTGTGCAGTCGACTTAGGAGACTGGACACTTTT 403 Query 125 TACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACAAAAA 184 ||||| |||| ||| || || || ||||| |||||||| || || | | || | || Sbjct 404 GACCGGCTCGGCTTACCAGGGTGCACCACAAGGGTTCTTTTTGGTGGAGAGAAA--AGAA 461 Query 185 GGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGT 244 ||| |||||| | |||||| | || || || |||| |||||| |||||||| Sbjct 462 GGA----CAAAATGGGAAATTGGAGAGAATAGAAGTGGGGGATGGATTTTCGGGATTTGT 517 Query 245 GCAATCTGGATGCTGTGTGGAGATCTGA 272 ||||| || || || |||||||||||| Sbjct 518 ACAATCAGGGTGTTGCGTGGAGATCTGA 545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 911455748000