Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq609225 300 2e-79 seq513 113 5e-23 seq53425 86.0 6e-15 >seq609225 Length=598 Score = 300 bits (332), Expect = 2e-79 Identities = 182/191 (95%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 430 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 371 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 370 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 312 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 311 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 252 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 251 TTGGATTTATT 241 >seq513 Length=497 Score = 113 bits (124), Expect = 5e-23 Identities = 136/181 (75%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || ||||||| || ||||||||| | |||||||| |||| ||||| |||||||||| ||| Sbjct 306 CTGTTACTTTTAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGAATACATTAGCAT 365 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || ||| | ||| || | ||| |||| ||| || | | ||| | ||||||| Sbjct 366 GGGATAGCATCATATGATTTT-GGTCATATTCTGTTGGCCTTTGGGATCATA-GTAATGA 423 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | |||| |||| |||| || | ||||| || |||| |||||||||||||||||||| Sbjct 424 TTAATAAGGATGGTCGAGGACATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 483 Query 190 T 190 | Sbjct 484 T 484 >seq53425 Length=554 Score = 86.0 bits (94), Expect = 6e-15 Identities = 130/181 (72%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || ||||||| || ||||||||| | |||||||| |||| |||| |||||||||| ||| Sbjct 249 CTATTACTTTTAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGAATACATTAGCAT 190 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 | ||| | ||| || | | | |||| ||| || | | ||| | ||||||| Sbjct 189 AGGATAGCATCATATGATTTTTG-TCATATTCTGTTGGCCTTTGGGATCATA-GTAATGA 132 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | |||| |||| ||| || | |||| || |||| ||| |||||||||||||||| Sbjct 131 TTAATAAGGATGGTCAGGAACATTCATATTTCATAGTCAGAGGAGAAATTCTTGGATTTA 72 Query 190 T 190 | Sbjct 71 T 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 508249620000