Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq880 172 1e-40 seq102179 167 6e-39 seq511650 154 4e-35 seq595140 136 1e-29 seq553357 127 5e-27 seq640505 120 7e-25 seq265423 111 4e-22 seq555976 91.5 4e-16 seq630980 89.7 1e-15 seq653322 84.2 5e-14 seq131160 84.2 5e-14 seq755847 80.6 6e-13 seq726033 77.0 8e-12 seq482562 77.0 8e-12 >seq880 Length=1136 Score = 172 bits (190), Expect = 1e-40 Identities = 149/185 (81%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 |||| ||||||||| | |||||| ||| ||| ||||| |||| ||||||||| | || Sbjct 432 ACCCACAGGCCTTCTATCTCCACGCGACATTGCTCCATCAAGCTTTCGCCCATTGCGAAA 373 Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130 |||||||| |||| ||||||||||||| |||| |||||||||| | ||||||| || Sbjct 372 AATTCCCCATTGCTATCTCCCGTAGGAGTTTGGATTGTGTCTCAGTCCTAGTGTGGTTGA 313 Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC 190 |||||||||||||||||||| |||||||| | ||| | ||| || | ||||||||| Sbjct 312 TCATCCTCTCAGACCAGCTACTGATCGTCGTATTGGTAAGATATTGCCTCACCAACTAGC 253 Query 191 TAATC 195 ||||| Sbjct 252 TAATC 248 >seq102179 Length=1915 Score = 167 bits (184), Expect = 6e-39 Identities = 283/410 (69%), Gaps = 30/410 (7%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| |||||||| | | ||| | ||| ||| ||||| | || ||||||| Sbjct 1471 TTCACCACCCGTGGGCCTTCTACCTCCACACAACATTGCTCCATCAAGATTTTGCCCATT 1530 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||| || ||| |||| | ||| | ||||||||| | ||||||| Sbjct 1531 GCGAAAAATTCCCCACTGTTGTCTCTCGTAAAATTCTAGGTCGTGTCTCAATCCCAGTGT 1590 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 || || |||||||||||||| ||||| |||| | |||| ||| || ||| | | ||| Sbjct 1591 GGTTGATCATCCTCTCAGACTAGCTACCGATCATTGCCTTGGTAAGCTATTGTCTCACCA 1650 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| || || | ||||| || | || |||| |||| Sbjct 1651 ACTAGCTAATCAGATGTGAGCCCATCC--------TCGGGCGGATTTTCCC---TTTTG- 1698 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 ||| | || | ||||||||| | |||||||| ||| | ||||||| | || Sbjct 1699 -CTTCTTAGCCTACGTGGTATTAGCAGTCTTTTCCAGTTGTTGTTCCCCTCCCAAGGACA 1757 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | |||||||||||| |||| |||| ||| || || |||| Sbjct 1758 GGTTCTTACGCATTACTCACCCATCCGACACT------AGAAACACCA-----CTTC--- 1803 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 || |||||||||||||||||| || |||| ||| | |||| ||||| Sbjct 1804 ---CCATTCGACTTGCATGTGTTAAGCATGCCACCAACATTCATCCTGAG 1850 >seq511650 Length=600 Score = 154 bits (170), Expect = 4e-35 Identities = 141/178 (79%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 18 GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCC 77 ||| |||| | |||||| ||| ||| ||||||| || ||||||||||| || | |||| Sbjct 171 GGCATTCTATCTCCACGCGACATTGCTCCATCAGGATTTCGCCCATTGTGAAAAACTCCC 230 Query 78 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCT 137 || |||| ||||||||||||| |||| |||||||||| | ||||||| || ||||| | Sbjct 231 CATTGCTATCTCCCGTAGGAGTTTGGATTGTGTCTCAGTACTAGTGTGGTTGATCATCTT 290 Query 138 CTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 ||||||||||||| |||| ||| | ||| | ||| || | |||||||||||||| Sbjct 291 CTCAGACCAGCTACTGATCATCGTATTGGTAAGATATTGCCTCACCAACTAGCTAATC 348 >seq595140 Length=218 Score = 136 bits (150), Expect = 1e-29 Identities = 110/128 (86%), Gaps = 4/128 (3%) Strand=Plus/Plus Query 72 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGT-CTCAGTTCCAGT-GTGGCTG 129 |||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||| Sbjct 3 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTACTCAGTCCCAGTAGTGGCTG 62 Query 130 GTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGT-GGGCCATTACCCCGCCAACTA 188 |||||||||| ||||||||| |||| |||||| ||| | | ||| || | ||||||| Sbjct 63 ATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGACTATTGCCTCACCAACTA 122 Query 189 G-CTAATC 195 | |||||| Sbjct 123 GTCTAATC 130 >seq553357 Length=280 Score = 127 bits (140), Expect = 5e-27 Identities = 136/180 (76%), Gaps = 5/180 (3%) Strand=Plus/Minus Query 31 CACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCC 90 |||||| || |||| ||| ||||| |||||||||| ||| ||||||||| ||||| || Sbjct 276 CACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACGACTGCCCCC 217 Query 91 CGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA 150 ||| |||||| || ||||||||||| |||||||||||| ||||| |||||||||| Sbjct 216 CGTGGGAGTCCGGGACGTGTCTCAGTCCCAGTGTGGCTGATCATCTGAAAAGACCAGCTA 157 Query 151 GGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCCATCTGGGTTCATC 210 | || | | ||| ||| ||||| ||||||| ||||| | || || ||||| Sbjct 156 AGCAT-----CATTGGTCAGCCTTTACCTGACCAACTACCTAATACTATGCAGGCTCATC 102 >seq640505 Length=2646 Score = 120 bits (132), Expect = 7e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 39 ATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAG 98 || ||| |||||||||| | ||||||| || ||||||||||| |||||| ||| ||| Sbjct 16 ATTGCTCCATCAGGCTTTCTCCCATTGCAGAAAATTCCCCACTGTTGCCTCTTGTAAGAG 75 Query 99 TCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGT 158 | ||| |||||||||| | ||||||||| |||||||||| ||| | ||| ||| | Sbjct 76 TTTGGGTTGTGTCTCAGTCCTAGTGTGGCTAATCATCCTCTCGGACTATCTACTGATTAT 135 Query 159 CGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194 | ||| ||| |||||| ||||||||| ||||| Sbjct 136 CACCTTGGTAAATTATTACCTCGCCAACTAACTAAT 171 >seq265423 Length=261 Score = 111 bits (122), Expect = 4e-22 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 42 GCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 101 ||| ||||| |||| | ||| ||| | |||||||||| |||||||| ||||||||| Sbjct 257 GCTCCATCAAGCTTTCACCCCTTGCAGAGAATTCCCCACTTTTGCCTCCCATAGGAGTCT 198 Query 102 GGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGC 161 | | ||||| ||| ||| |||| ||| |||| | ||||||||| ||| |||| |||| Sbjct 197 AGGTCATGTCTTAGTCCCAATGTGTCTGATCATGCCCTCAGACCAACTATTGATCATCGC 138 Query 162 CTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 || | || ||| || | |||||||||||||| Sbjct 137 CTTAATAAGCTATTGCCTCACCAACTAGCTAATC 104 >seq555976 Length=593 Score = 91.5 bits (100), Expect = 4e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 106 CGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAG 165 ||||||||||| |||||||| || |||||||||||||||||||| |||| |||| | | Sbjct 328 CGTGTCTCAGTCTCAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCATCGCTTTG 387 Query 166 GTGGGCCATTACCCCGCCAACTAGCTAATC 195 || | ||| || | |||||||||||||| Sbjct 388 GTAAGTTATTGCCTCACCAACTAGCTAATC 417 >seq630980 Length=860 Score = 89.7 bits (98), Expect = 1e-15 Identities = 155/223 (70%), Gaps = 13/223 (6%) Strand=Plus/Minus Query 114 AGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCA 173 ||| |||||||||||| ||||||||||||| |||||| |||| ||| ||||| || | Sbjct 359 AGTCCCAGTGTGGCTGATCATCCTCTCAGATCAGCTACTGATCATCGTGTAGGTAAGCTA 300 Query 174 TTACCCCGCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTC 233 || || | |||||||||||||| | | ||| ||| || || Sbjct 299 TTGCCTCACCAACTAGCTAATCAGACACAAACCCCTCCTCAGGTG-GA---------TTC 250 Query 234 CCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCC 293 | ||| |||| || | | | |||| |||||||| || ||||||| ||| |||||| Sbjct 249 CTCCT-TTTGCTCCTCAGCC--TATGGAGTATTAGCAGCCATTTCCAGCTGTTGTCCCCC 193 Query 294 TCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACT 336 ||| ||||| ||| | | ||||||||||||| |||||| Sbjct 192 TCCCAGGGGCAGGTTCTTAAGCGTTACTCACCCGTCTGCCACT 150 >seq653322 Length=784 Score = 84.2 bits (92), Expect = 5e-14 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 17 AGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCC 76 ||||||||| | | |||||||||| ||| ||||| |||| ||| ||||| | || ||||| Sbjct 533 AGGCCTTCTACCTCCACGCGGCATTGCTTCATCATGCTTTCGCTCATTGCGGAAAATTCC 592 Query 77 CCACTGCTGCCTCCCGTAG 95 |||| | |||||||||||| Sbjct 593 CCACCGTTGCCTCCCGTAG 611 >seq131160 Length=423 Score = 84.2 bits (92), Expect = 5e-14 Identities = 102/138 (74%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 57 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 116 |||||||||| ||| ||||||||||||| | ||| | ||||||||| ||||||| | Sbjct 26 CGCCCATTGTCCAAGATTCCCCACTGCTATCCCCCATGGGAGTCTGG--GTTGTCTCAAT 83 Query 117 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTA 176 ||| ||| ||| |||||| ||| || ||| | ||| | | || ||| ||| | | Sbjct 84 CCCAAAGTGACTGATCATCCGAAAAGATCAACTAAGCATCATTGGCTTGGTTAGCCTTGA 143 Query 177 CCCCGCCAACTAGCTAAT 194 || |||||||| ||||| Sbjct 144 CCTGGCCAACTACCTAAT 161 >seq755847 Length=781 Score = 80.6 bits (88), Expect = 6e-13 Identities = 101/138 (73%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 57 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 116 |||||||||| ||| ||||||||||||| || || | |||||||| | ||||||| | Sbjct 756 CGCCCATTGTCCAAGATTCCCCACTGCTACCCACCATGGGAGTCTGAGC--TGTCTCAAT 699 Query 117 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTA 176 |||||||||||| ||||| | | || ||| ||| | | || ||| ||| | | Sbjct 698 CCCAGTGTGGCTGATCATCAGAAAAAATCAACTAAACATCATTGGCTTGGTCAGCCTTGA 639 Query 177 CCCCGCCAACTAGCTAAT 194 || ||||||| ||||| Sbjct 638 CCTGACCAACTACCTAAT 621 >seq726033 Length=5078 Score = 77.0 bits (84), Expect = 8e-12 Identities = 111/157 (71%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 38 CATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGA 97 ||| ||| ||| |||||| ||||||||| || ||| |||| || || ||||| ||||| Sbjct 1164 CATTGCTCCATTAGGCTTTTACCCATTGTGGAAAATTTCCCATTGTTGTCTCCCATAGGA 1223 Query 98 GTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCG 157 || | | | || | ||| ||||||| | ||||||||||| ||| | || ||| | Sbjct 1224 GTTTAGGCATTGCTTTAGTCTTAGTGTGGTTTATCATCCTCTCACACCCGGTATTGATTG 1283 Query 158 TCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194 | |||| | | | ||| | |||||||||||| Sbjct 1284 TTGCCTTGATAAACTATTGTCTTATCAACTAGCTAAT 1320 >seq482562 Length=498 Score = 77.0 bits (84), Expect = 8e-12 Identities = 95/128 (74%), Gaps = 3/128 (2%) Strand=Plus/Plus Query 69 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTC--AGTTCCAGTGTGG 126 || ||| ||| |||| | ||| ||| |||||||| ||||||| |||| || | ||| Sbjct 169 AAAATTTTCCATTGCTACTTCC-GTATGAGTCTGGGTTGTGTCTCTTAGTTTCAATATGG 227 Query 127 CTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAAC 186 || |||||||||||||||| || |||| ||| || | | | ||||||| ||||| Sbjct 228 TTGATCATCCTCTCAGACCACTTAATGATCATCGTCTTGATAAGTCATTACCTTACCAAC 287 Query 187 TAGCTAAT 194 ||| |||| Sbjct 288 TAGTTAAT 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1213157128000