Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17]
756,125 sequences; 432,755,284 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq880 172 1e-40
seq102179 167 6e-39
seq511650 154 4e-35
seq595140 136 1e-29
seq553357 127 5e-27
seq640505 120 7e-25
seq265423 111 4e-22
seq555976 91.5 4e-16
seq630980 89.7 1e-15
seq653322 84.2 5e-14
seq131160 84.2 5e-14
seq755847 80.6 6e-13
seq726033 77.0 8e-12
seq482562 77.0 8e-12
>seq880
Length=1136
Score = 172 bits (190), Expect = 1e-40
Identities = 149/185 (81%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70
|||| ||||||||| | |||||| ||| ||| ||||| |||| ||||||||| | ||
Sbjct 432 ACCCACAGGCCTTCTATCTCCACGCGACATTGCTCCATCAAGCTTTCGCCCATTGCGAAA 373
Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130
|||||||| |||| ||||||||||||| |||| |||||||||| | ||||||| ||
Sbjct 372 AATTCCCCATTGCTATCTCCCGTAGGAGTTTGGATTGTGTCTCAGTCCTAGTGTGGTTGA 313
Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC 190
|||||||||||||||||||| |||||||| | ||| | ||| || | |||||||||
Sbjct 312 TCATCCTCTCAGACCAGCTACTGATCGTCGTATTGGTAAGATATTGCCTCACCAACTAGC 253
Query 191 TAATC 195
|||||
Sbjct 252 TAATC 248
>seq102179
Length=1915
Score = 167 bits (184), Expect = 6e-39
Identities = 283/410 (69%), Gaps = 30/410 (7%)
Strand=Plus/Plus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
|| || ||||| |||||||| | | ||| | ||| ||| ||||| | || |||||||
Sbjct 1471 TTCACCACCCGTGGGCCTTCTACCTCCACACAACATTGCTCCATCAAGATTTTGCCCATT 1530
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
| | || ||||||||||| || ||| |||| | ||| | ||||||||| | |||||||
Sbjct 1531 GCGAAAAATTCCCCACTGTTGTCTCTCGTAAAATTCTAGGTCGTGTCTCAATCCCAGTGT 1590
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
|| || |||||||||||||| ||||| |||| | |||| ||| || ||| | | |||
Sbjct 1591 GGTTGATCATCCTCTCAGACTAGCTACCGATCATTGCCTTGGTAAGCTATTGTCTCACCA 1650
Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244
||||||||||| || || | ||||| || | || |||| ||||
Sbjct 1651 ACTAGCTAATCAGATGTGAGCCCATCC--------TCGGGCGGATTTTCCC---TTTTG- 1698
Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304
||| | || | ||||||||| | |||||||| ||| | ||||||| | ||
Sbjct 1699 -CTTCTTAGCCTACGTGGTATTAGCAGTCTTTTCCAGTTGTTGTTCCCCTCCCAAGGACA 1757
Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364
| ||| | |||||||||||| |||| |||| ||| || || ||||
Sbjct 1758 GGTTCTTACGCATTACTCACCCATCCGACACT------AGAAACACCA-----CTTC--- 1803
Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
|| |||||||||||||||||| || |||| ||| | |||| |||||
Sbjct 1804 ---CCATTCGACTTGCATGTGTTAAGCATGCCACCAACATTCATCCTGAG 1850
>seq511650
Length=600
Score = 154 bits (170), Expect = 4e-35
Identities = 141/178 (79%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 18 GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCC 77
||| |||| | |||||| ||| ||| ||||||| || ||||||||||| || | ||||
Sbjct 171 GGCATTCTATCTCCACGCGACATTGCTCCATCAGGATTTCGCCCATTGTGAAAAACTCCC 230
Query 78 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCT 137
|| |||| ||||||||||||| |||| |||||||||| | ||||||| || ||||| |
Sbjct 231 CATTGCTATCTCCCGTAGGAGTTTGGATTGTGTCTCAGTACTAGTGTGGTTGATCATCTT 290
Query 138 CTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195
||||||||||||| |||| ||| | ||| | ||| || | ||||||||||||||
Sbjct 291 CTCAGACCAGCTACTGATCATCGTATTGGTAAGATATTGCCTCACCAACTAGCTAATC 348
>seq595140
Length=218
Score = 136 bits (150), Expect = 1e-29
Identities = 110/128 (86%), Gaps = 4/128 (3%)
Strand=Plus/Plus
Query 72 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGT-CTCAGTTCCAGT-GTGGCTG 129
|||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||
Sbjct 3 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTACTCAGTCCCAGTAGTGGCTG 62
Query 130 GTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGT-GGGCCATTACCCCGCCAACTA 188
|||||||||| ||||||||| |||| |||||| ||| | | ||| || | |||||||
Sbjct 63 ATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGACTATTGCCTCACCAACTA 122
Query 189 G-CTAATC 195
| ||||||
Sbjct 123 GTCTAATC 130
>seq553357
Length=280
Score = 127 bits (140), Expect = 5e-27
Identities = 136/180 (76%), Gaps = 5/180 (3%)
Strand=Plus/Minus
Query 31 CACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCC 90
|||||| || |||| ||| ||||| |||||||||| ||| ||||||||| ||||| ||
Sbjct 276 CACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACGACTGCCCCC 217
Query 91 CGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA 150
||| |||||| || ||||||||||| |||||||||||| ||||| ||||||||||
Sbjct 216 CGTGGGAGTCCGGGACGTGTCTCAGTCCCAGTGTGGCTGATCATCTGAAAAGACCAGCTA 157
Query 151 GGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCCATCTGGGTTCATC 210
| || | | ||| ||| ||||| ||||||| ||||| | || || |||||
Sbjct 156 AGCAT-----CATTGGTCAGCCTTTACCTGACCAACTACCTAATACTATGCAGGCTCATC 102
>seq640505
Length=2646
Score = 120 bits (132), Expect = 7e-25
Identities = 120/156 (77%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 39 ATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAG 98
|| ||| |||||||||| | ||||||| || ||||||||||| |||||| ||| |||
Sbjct 16 ATTGCTCCATCAGGCTTTCTCCCATTGCAGAAAATTCCCCACTGTTGCCTCTTGTAAGAG 75
Query 99 TCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGT 158
| ||| |||||||||| | ||||||||| |||||||||| ||| | ||| ||| |
Sbjct 76 TTTGGGTTGTGTCTCAGTCCTAGTGTGGCTAATCATCCTCTCGGACTATCTACTGATTAT 135
Query 159 CGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194
| ||| ||| |||||| ||||||||| |||||
Sbjct 136 CACCTTGGTAAATTATTACCTCGCCAACTAACTAAT 171
>seq265423
Length=261
Score = 111 bits (122), Expect = 4e-22
Identities = 117/154 (76%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 42 GCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 101
||| ||||| |||| | ||| ||| | |||||||||| |||||||| |||||||||
Sbjct 257 GCTCCATCAAGCTTTCACCCCTTGCAGAGAATTCCCCACTTTTGCCTCCCATAGGAGTCT 198
Query 102 GGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGC 161
| | ||||| ||| ||| |||| ||| |||| | ||||||||| ||| |||| ||||
Sbjct 197 AGGTCATGTCTTAGTCCCAATGTGTCTGATCATGCCCTCAGACCAACTATTGATCATCGC 138
Query 162 CTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195
|| | || ||| || | ||||||||||||||
Sbjct 137 CTTAATAAGCTATTGCCTCACCAACTAGCTAATC 104
>seq555976
Length=593
Score = 91.5 bits (100), Expect = 4e-16
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 106 CGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAG 165
||||||||||| |||||||| || |||||||||||||||||||| |||| |||| | |
Sbjct 328 CGTGTCTCAGTCTCAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCATCGCTTTG 387
Query 166 GTGGGCCATTACCCCGCCAACTAGCTAATC 195
|| | ||| || | ||||||||||||||
Sbjct 388 GTAAGTTATTGCCTCACCAACTAGCTAATC 417
>seq630980
Length=860
Score = 89.7 bits (98), Expect = 1e-15
Identities = 155/223 (70%), Gaps = 13/223 (6%)
Strand=Plus/Minus
Query 114 AGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCA 173
||| |||||||||||| ||||||||||||| |||||| |||| ||| ||||| || |
Sbjct 359 AGTCCCAGTGTGGCTGATCATCCTCTCAGATCAGCTACTGATCATCGTGTAGGTAAGCTA 300
Query 174 TTACCCCGCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTC 233
|| || | |||||||||||||| | | ||| ||| || ||
Sbjct 299 TTGCCTCACCAACTAGCTAATCAGACACAAACCCCTCCTCAGGTG-GA---------TTC 250
Query 234 CCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCC 293
| ||| |||| || | | | |||| |||||||| || ||||||| ||| ||||||
Sbjct 249 CTCCT-TTTGCTCCTCAGCC--TATGGAGTATTAGCAGCCATTTCCAGCTGTTGTCCCCC 193
Query 294 TCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACT 336
||| ||||| ||| | | ||||||||||||| ||||||
Sbjct 192 TCCCAGGGGCAGGTTCTTAAGCGTTACTCACCCGTCTGCCACT 150
>seq653322
Length=784
Score = 84.2 bits (92), Expect = 5e-14
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 17 AGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCC 76
||||||||| | | |||||||||| ||| ||||| |||| ||| ||||| | || |||||
Sbjct 533 AGGCCTTCTACCTCCACGCGGCATTGCTTCATCATGCTTTCGCTCATTGCGGAAAATTCC 592
Query 77 CCACTGCTGCCTCCCGTAG 95
|||| | ||||||||||||
Sbjct 593 CCACCGTTGCCTCCCGTAG 611
>seq131160
Length=423
Score = 84.2 bits (92), Expect = 5e-14
Identities = 102/138 (74%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 57 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 116
|||||||||| ||| ||||||||||||| | ||| | ||||||||| ||||||| |
Sbjct 26 CGCCCATTGTCCAAGATTCCCCACTGCTATCCCCCATGGGAGTCTGG--GTTGTCTCAAT 83
Query 117 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTA 176
||| ||| ||| |||||| ||| || ||| | ||| | | || ||| ||| | |
Sbjct 84 CCCAAAGTGACTGATCATCCGAAAAGATCAACTAAGCATCATTGGCTTGGTTAGCCTTGA 143
Query 177 CCCCGCCAACTAGCTAAT 194
|| |||||||| |||||
Sbjct 144 CCTGGCCAACTACCTAAT 161
>seq755847
Length=781
Score = 80.6 bits (88), Expect = 6e-13
Identities = 101/138 (73%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 57 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 116
|||||||||| ||| ||||||||||||| || || | |||||||| | ||||||| |
Sbjct 756 CGCCCATTGTCCAAGATTCCCCACTGCTACCCACCATGGGAGTCTGAGC--TGTCTCAAT 699
Query 117 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTA 176
|||||||||||| ||||| | | || ||| ||| | | || ||| ||| | |
Sbjct 698 CCCAGTGTGGCTGATCATCAGAAAAAATCAACTAAACATCATTGGCTTGGTCAGCCTTGA 639
Query 177 CCCCGCCAACTAGCTAAT 194
|| ||||||| |||||
Sbjct 638 CCTGACCAACTACCTAAT 621
>seq726033
Length=5078
Score = 77.0 bits (84), Expect = 8e-12
Identities = 111/157 (71%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 38 CATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGA 97
||| ||| ||| |||||| ||||||||| || ||| |||| || || ||||| |||||
Sbjct 1164 CATTGCTCCATTAGGCTTTTACCCATTGTGGAAAATTTCCCATTGTTGTCTCCCATAGGA 1223
Query 98 GTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCG 157
|| | | | || | ||| ||||||| | ||||||||||| ||| | || ||| |
Sbjct 1224 GTTTAGGCATTGCTTTAGTCTTAGTGTGGTTTATCATCCTCTCACACCCGGTATTGATTG 1283
Query 158 TCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194
| |||| | | | ||| | ||||||||||||
Sbjct 1284 TTGCCTTGATAAACTATTGTCTTATCAACTAGCTAAT 1320
>seq482562
Length=498
Score = 77.0 bits (84), Expect = 8e-12
Identities = 95/128 (74%), Gaps = 3/128 (2%)
Strand=Plus/Plus
Query 69 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTC--AGTTCCAGTGTGG 126
|| ||| ||| |||| | ||| ||| |||||||| ||||||| |||| || | |||
Sbjct 169 AAAATTTTCCATTGCTACTTCC-GTATGAGTCTGGGTTGTGTCTCTTAGTTTCAATATGG 227
Query 127 CTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAAC 186
|| |||||||||||||||| || |||| ||| || | | | ||||||| |||||
Sbjct 228 TTGATCATCCTCTCAGACCACTTAATGATCATCGTCTTGATAAGTCATTACCTTACCAAC 287
Query 187 TAGCTAAT 194
||| ||||
Sbjct 288 TAGTTAAT 295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1213157128000
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