Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq748765 136 9e-30 seq102179 116 9e-24 seq180117 111 4e-22 seq507796 105 2e-20 seq393510 96.9 8e-18 seq57277 95.1 3e-17 seq685854 87.8 4e-15 >seq748765 Length=357 Score = 136 bits (150), Expect = 9e-30 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 ||||||||| | |||||| |||||||| || |||| | | |||||| ||| ||||| Sbjct 306 AGTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCCAAAAGCGAA 247 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 ||| ||| |||| || ||| ||| || ||||||| |||||||||||| ||||| Sbjct 246 GGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCAAACGGGATT 187 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 |||||||||||||||||| |||||||||||||| Sbjct 186 AGATACCCTGGTAGTCCATGCCGTAAACGATGA 154 >seq102179 Length=1915 Score = 116 bits (128), Expect = 9e-24 Identities = 233/344 (68%), Gaps = 1/344 (0%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 |||||| |||| ||||||||| ||| | || | ||||||| ||| || || Sbjct 1436 TGAGGAATAAGCATCGGCTAACTCTATGCTAATAGTCATAGTAATACAGAGGATGCAAGT 1377 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 ||||| |||||| | |||||| |||| || |||||||| || ||||||| | | ||| Sbjct 1376 GTTATTCGGAATGATTGGGCGAAAAGCGTCAGTAGGTGGCTTTTTAAGTCTGCTTTCAAA 1317 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||||||||| || | |||||| | ||| |||| | ||| | | Sbjct 1316 TCCCAAGGCTCAACCCTAAACAGGCGGTGGAAACTACTAAGCTGGAGTACCATAGGAGTA 1257 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 |||||| | || | | ||||||| | |||| ||| | | ||| |||| | | | Sbjct 1256 GAGGGAATTTTTGATGGATCAGTGAAATTCATAGAGATTGGAAAGAATACCAAAGACAAG 1197 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || | ||| || | ||| |||||| ||||||| ||||| | || ||||| Sbjct 1196 AGCACTCTATTGGGCTAACATTGATACTGAGAGACGAAAGCTAGGGGAACTAATGGGATT 1137 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGT 348 |||||||| ||||||| |||||||| |||| ||||| || || Sbjct 1136 AGATACCC-AGTAGTCCTAGCCGTAAATGATGGATACTTGGCGT 1094 >seq180117 Length=395 Score = 111 bits (122), Expect = 4e-22 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 ||||||||| ||||||||||||||||||||| ||| || || |||||||||||| | Sbjct 166 CGGCTAACTCTATGCCAGCAGCCGCGGTAATACAAAGGATGCAAGTGTTATCCGGAATGA 107 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 ||| |||| || || |||||||| || ||||||| | || ||| | | |||||||| Sbjct 106 TTGGACGTATAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAAGGCTCAAC 47 Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 || || || | |||||| | ||| |||| | | ||||||| Sbjct 46 CCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 1 >seq507796 Length=1569 Score = 105 bits (116), Expect = 2e-20 Identities = 271/405 (67%), Gaps = 12/405 (3%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 || ||| |||| || |||||| ||| || || | | |||||| ||| || || Sbjct 1426 TGTGGAATAAGCATCGTCTAACTCTATGCTAGTAGTCACAGTAATATAGAGGATGCAAGT 1367 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 ||||| | |||| | ||||||||||| || |||||||||| ||||||| | | ||| Sbjct 1366 GTTATTCAGAATGATTGGGCGTAAAGCGTTAATAGGTGGTTTTTTAAGTCTGCCTTTAAA 1307 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | |||||||||| || | |||||| | | || || ||||| | Sbjct 1306 TCCCGAGGCTCAACCCTAAACAGGCGGTCGAAACTAC----CAAGGGT--AGGAGTAG-- 1255 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 || |||||| | || ||| ||||||||| |||| ||| | | || |||| | | | Sbjct 1254 AG-GGAATTTTTTATGGAGCAGTGAAATGCATAGAGATTGGAAATAATACCAACGACAAG 1196 Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304 || | || | ||| | ||| |||||| ||||||| |||||| || |||| Sbjct 1195 AGCACTCTACTAGGCTGACATTGATACTGAGAGACGAAAGCTAGGGGAGTGAATGAGATT 1136 Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTG 363 |||||||| ||||||| | |||||| |||| ||||| || || ||| || || | Sbjct 1135 AGATACCC-AGTAGTCCTAGTCGTAAATGATGGATACTTGGGGT-TATGCGTATCAACTC 1078 Query 364 CTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| | ||| |||| ||||||| ||| ||||||||| Sbjct 1077 GTGCAGTGTTGTAGCTTACGCGTTAAGTATCCCATTTGGGGAGTA 1033 >seq393510 Length=226 Score = 96.9 bits (106), Expect = 8e-18 Identities = 122/168 (73%), Gaps = 6/168 (4%) Strand=Plus/Minus Query 154 GAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATG 213 |||||| | ||| |||| | | |||||||| |||||| | ||| ||| |||||||| Sbjct 223 GAAACTACCAAGCTGGAGTACGGTAGGGGCAAAGGGAATTTCCGGTGGAGCTGTGAAATG 164 Query 214 CGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTG 273 |||||| || | | |||||||| ||||||| || |||| | | ||||||| Sbjct 163 CGTAGAGATCGGAAAGAACACCAATGGCGAAAGCACTTTGCAAG------GCCGACACTG 110 Query 274 AGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC 321 || ||||||| |||| |||| ||||||||||||| ||||||| Sbjct 109 AGAGACGAAAGCTAAGGGAACAAATGGGATTAGATACCCCAGTAGTCC 62 >seq57277 Length=288 Score = 95.1 bits (104), Expect = 3e-17 Identities = 85/106 (80%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATAC--GTAGGGGG 59 ||| ||| | |||||||||||||||| ||||||| ||| || ||||| || | ||||| Sbjct 184 ACTCGAGAAAGAAGCCCCGGCTAACTTCGTGCCAACAGTCGTGGTAAGACGGGAGGGGGG 125 Query 60 CTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTT 105 | || ||| | |||||| ||||||||||||||| | |||||| || Sbjct 124 CAAGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACATAGGTGATT 79 >seq685854 Length=609 Score = 87.8 bits (96), Expect = 4e-15 Identities = 129/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 169 GAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAG 228 |||| ||| ||||||| |||||| ||| |||| ||||||||||||| || | | Sbjct 569 GAGTACAGTAGGGGCATAGGGAATTTTAGGTGGAGCGATGAAATGCGTAGAGATCAAAAA 510 Query 229 GAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA---ACTGACACTGAGGCTCGAAAGC 285 ||| |||| |||| || || |||| ||| ||| | | |||| |||||| Sbjct 509 GAATACCAACAACGAAAGCA-CT--CTGGTGTGTCGACACTAAAATTGAGAGATGAAAGC 453 Query 286 GTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345 |||||| ||| ||||||||||||| ||||||| || ||||| |||| |||||||| Sbjct 452 TAGGGGAGAAAATGGGATTAGATACCCAAGTAGTCCTAGCAGTAAATGATGGATACTAGG 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1194102304000