Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq146862 192 1e-46 seq719308 185 2e-44 seq316412 150 3e-34 seq537996 118 2e-24 seq446937 113 8e-23 seq57738 107 4e-21 seq377046 98.7 2e-18 seq149012 98.7 2e-18 seq55130 93.3 8e-17 seq754931 87.8 3e-15 seq291359 87.8 3e-15 seq720387 86.0 1e-14 seq194420 84.2 4e-14 >seq146862 Length=348 Score = 192 bits (212), Expect = 1e-46 Identities = 175/218 (80%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 68 CCGGCTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 || |||||||||||||||||| | | | || | | |||||||| ||||||||||||||| Sbjct 132 CCAGCTTCTTAGAGGGACTATGGCCACTTAGGCTAAGGAAGTTTTAGGCAATAACAGGTC 191 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 ||||||| ||||||||||| ||| ||||||||| ||||||||| | |||||| | Sbjct 192 TGTGATGTCCTTAGATGTTTTGGATCGCACGCGCACTACACTGATGTATTCAACGAATCT 251 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 || ||||||||| ||| | | |||||||| | ||| | | || |||||||||| | Sbjct 252 ATAGCCTTGGCCGATAGGCCCGAGTAATCTT-TGAAATTTCATTATGATGGGGATAGATC 310 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 ||||||||| ||| ||||||||||||||| |||||||| Sbjct 311 ATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAA 348 >seq719308 Length=1748 Score = 185 bits (204), Expect = 2e-44 Identities = 187/240 (78%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||||||||| | ||| | ||| | ||||| |||||||||||||| || || Sbjct 886 GCTTCTTAGAGGGACTATAGCCGCTTAGGCCAA-GGAAGATTGAGGCAATAACAAGTTTG 944 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||| | ||| ||| ||||||| | | ||| |||| || Sbjct 945 TGATGCCCTTAGATGTTCTGGGTCACACACGCACTACACTAATGTATTCAATGAGTCTAT 1004 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 ||||| || || | | |||||||| | ||| | || || |||| ||||| ||| Sbjct 1005 AGCCTTGATCGAAAAACCCGAGTAATCTT-TGAAATTTCATCATGATGGGAATAGATCAT 1063 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||||||| ||||||||||||||| ||||||||| | |||||| | || ||||| Sbjct 1064 TGCAATTATTGGTCTTCAACGAGGAATTCCTAGTAAGGACAACTCATCAACCCGTGTTGA 1123 >seq316412 Length=479 Score = 150 bits (166), Expect = 3e-34 Identities = 171/226 (76%), Gaps = 14/226 (6%) Strand=Plus/Plus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 |||||||| ||||| |||||||| | |||||||||||||| |||| |||| || || ||| Sbjct 4 GGAAGTTTAAGGCAGTAACAGGTTTATGATGCCCTTAGATATTCTAGGCCACAGGCACGC 63 Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222 ||| | || | ||| ||||| | || ||| || |||||||||| | || Sbjct 64 TACGCAGATGTATTCAATGAGTTGA-CA----GGC-------TC-GGGTAATCTT-TGAA 109 Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282 | | || || |||||||||| |||| ||||| ||| |||||||| |||||| ||||| Sbjct 110 ATTTCATCATGATGGGGATAGATCATTACAATTGTTGGTCTTCAACAAGGAATTCCTAGC 169 Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| ||||||||| | ||||| ||||| | ||||||||| Sbjct 170 AAGCGCGAGTCATCAGCTCATGTTGACTACGTTTTTACCCTTTGTA 215 >seq537996 Length=271 Score = 118 bits (130), Expect = 2e-24 Identities = 86/100 (86%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| |||||||||| |||||||||| ||| ||||||| || |||| ||||||||| || Sbjct 13 TCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAATGATGAATTCCTAGTAAGTGC 72 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||||||| |||||| ||| ||||||||||||||| Sbjct 73 GAGTCATCAGCTTGCGTTGGCTACATCCCTGCCCTTTGTA 112 >seq446937 Length=1812 Score = 113 bits (124), Expect = 8e-23 Identities = 77/87 (89%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301 ||| |||||||||| ||| ||||||||||||||| |||||||||| || ||||| ||| Sbjct 1812 AGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCACGAGTCATGAGCTT 1753 Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| ||||||||||||||||||| Sbjct 1752 GCGTTGACTACGTCCCTGCCCTTTGTA 1726 >seq57738 Length=295 Score = 107 bits (118), Expect = 4e-21 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||||| ||| |||||||||| |||| ||||||||||||| ||||||||| ||||| Sbjct 1 ATTGCAATTGTTGGTCTTCAACGATGAATTCCTAGTAAGCGCGAGTCATCAGCTTGCGTT 60 Query 307 GATTACGTCCCTGCCCTTTGTA 328 || ||||||||| ||||||||| Sbjct 61 GACTACGTCCCTACCCTTTGTA 82 >seq377046 Length=383 Score = 98.7 bits (108), Expect = 2e-18 Identities = 94/119 (79%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 210 GTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 269 |||||||| | ||| | || || |||||||||| |||||||||| ||| |||| ||| Sbjct 383 GTAATCTT-TGAAATTTCATCATGATGGGGATAGATCATTGCAATTGTTGGTCTTTAACA 325 Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||| |||||||||||| ||||| ||| | ||| | ||||||| | |||||| || Sbjct 324 AGGAATTCCTAGTAAGCGCTAGTCATTAGCTCATGTTAACTACGTCCTTACCCTTTATA 266 >seq149012 Length=479 Score = 98.7 bits (108), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 6/149 (4%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA---AGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||||| || | ||| || | | ||||||||||||||||||||||||| Sbjct 405 CTTCTTAGAGGGACCAT--GATCACTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTA 348 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||| |||| | || || ||||||||| | | ||| |||| | Sbjct 347 CGATGCCCTTAGATGTTTTGGG-CACATGCACGCTACACTAATGTATTCAATGAGTCTGT 289 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTT 217 |||||| | | | ||||||||||| Sbjct 288 AACCTTGACTAACAAGCTTGGGTAATCTT 260 >seq55130 Length=403 Score = 93.3 bits (102), Expect = 8e-17 Identities = 53/54 (98%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC 158 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 350 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGACCGCACGC 403 >seq754931 Length=472 Score = 87.8 bits (96), Expect = 3e-15 Identities = 111/150 (74%), Gaps = 6/150 (4%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGCTCA---AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| || | ||| || | | | |||||||||| |||| |||| | Sbjct 68 GCTTCTTAGAGGGACCAT--GATCACTTAGGCCAAGAAAGTTTGAGGTGATAATAGGTTT 125 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 |||||||||||||||||| | | | || | || |||||| | | |||||||| | Sbjct 126 GTGATGCCCTTAGATGTT-TTAGACACATGTGCATTACACTAATGTATGCAACGAGTCTA 184 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTT 217 | |||||| | ||||| |||||||||| Sbjct 185 TAACCTTGATTGACAGGTCCGGGTAATCTT 214 >seq291359 Length=243 Score = 87.8 bits (96), Expect = 3e-15 Identities = 86/109 (79%), Gaps = 4/109 (4%) Strand=Plus/Minus Query 64 GTCGCCGGCTTCTTAGAGGGACTAT--CGGCTCAAGCCGATGGAAGTTTGAGGCAATAAC 121 || ||| ||||||||||||||||| || ||||| ||| |||||||||| || | | Sbjct 187 GTGGCCAACTTCTTAGAGGGACTATGGTGGTTCAAG--AATGAAAGTTTGAGGTAAGATC 130 Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||| ||||||||| ||| ||||| ||| |||||| | |||||| ||| Sbjct 129 AGGTTTGTGATGCCTTTACATGTTTTGGACCGCACACATGCTACATTGA 81 >seq720387 Length=1934 Score = 86.0 bits (94), Expect = 1e-14 Identities = 170/259 (66%), Gaps = 32/259 (12%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||||||||| | || || |||| ||||| |||||||||||||| | Sbjct 823 GCTTCTTAGAGGGACTATGATAGTTTAGGTGAAGGAAATTTGAAGCAATAACAGGTCTAT 882 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 |||| |||||||||| ||| ||| | | | |||| ||| | ||||||||| || Sbjct 883 AATGCTCTTAGATGTTTTGGATTGCATGTGTGTTACATTGATGTATTCAACGAGTTTATA 942 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||||| | | | | ||||||| || Sbjct 943 GTCTTGGTTGACAAGCCAAAGTAATCT-------------------------------TT 971 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||| ||| |||||||| |||||| |||||||| | | | ||||||| |||||| Sbjct 972 GCAATTGTTGGTCTTCAACAAGGAATTCCTAGTAAACATGAGCCATCAGCTTACGTTGAC 1031 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||| | || |||||| Sbjct 1032 TACGTCCTTACCTTTTGTA 1050 >seq194420 Length=215 Score = 84.2 bits (92), Expect = 4e-14 Identities = 66/77 (86%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 73 TTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||| | ||| ||||| | |||||||| ||||| |||||||| | || Sbjct 140 TTCTTAGAGGGACTATGGTCGCTTAAGCCAA-GGAAGTTTAAGGCAGTAACAGGTTTATG 198 Query 131 ATGCCCTTAGATGTTCT 147 |||||||||||| |||| Sbjct 199 ATGCCCTTAGATATTCT 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 940037984000