Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq724289 95.1 4e-17 seq557120 86.0 2e-14 seq45134 78.8 3e-12 >seq724289 Length=1343 Score = 95.1 bits (104), Expect = 4e-17 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 36 ACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGG 95 ||||||| | ||||||| || ||| | ||||||||| | ||| | || | |||| Sbjct 978 ACCCGAACCTAAGTGATATATTCATAACTAGGATGAAGCTTGGGTGAAACCAAGTAGAGG 919 Query 96 TCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAA 155 || || | ||| |||||||| ||| || | ||||| |||| || |||||||| || | Sbjct 918 TCAAAATCAACTGATGTTGAAGAATAAGCGAATGAGTTGTGATTAAGGGTGAAATGCCAC 859 Query 156 ACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 ||||||| || |||||||||||| || ||| Sbjct 858 TCAAACTTAGAGCTAGCTGGTTCTCCCCAAAA 827 >seq557120 Length=752 Score = 86.0 bits (94), Expect = 2e-14 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 48 GTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107 |||||||| ||||| |||||||||| | ||| | || || ||||||||||| ||| Sbjct 371 GTGATCTATCCATGATCAGGATGAAGTTTGGGTGAAACTAAGTGAAGGTCCGAACCGACT 430 Query 108 AATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAA 167 |||||||| ||| |||||||||| | ||| || || ||||| | | | ||| | || Sbjct 431 GATGTTGAAGAATCAGGGGATGAGTTATGGTTAAGGTTGAAATGTCACTCGAACCTAGAG 490 Query 168 ATAGCTGGTTCTCTCCGAAA 187 | || | ||||| ||||| Sbjct 491 CTGGCCGATTCTCCTCGAAA 510 >seq45134 Length=380 Score = 78.8 bits (86), Expect = 3e-12 Identities = 76/98 (78%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 ||||||||||||| ||| |||||||| ||| || | |||| ||||| ||||||||||| Sbjct 19 TGGAGGTCCGAACTGACTGATGTTGAAGAATCAGCGAATGAATTGTGGTTAGGGGTGAAA 78 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 || | | ||| || ||| |||||||| |||||| Sbjct 79 TGCCACTCGAACCCAGAGCTAGTTGGTTCTCCCCGAAA 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1676824512000