Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17]
756,125 sequences; 432,755,284 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq880 86.0 1e-14
seq553357 77.0 7e-12
seq511650 75.2 2e-11
seq595140 73.4 8e-11
>seq880
Length=1136
Score = 86.0 bits (94), Expect = 1e-14
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || ||||| || | ||| ||| || ||| |||||| || ||||| ||
Sbjct 423 CCTTCTATCTCCACGCGACATTGCTCCATCAAGCTTTCGCCCATTGCGAAAAATTCCCCA 364
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||| |||||||||||||||||| |||||||||| | | ||||| || | ||||||
Sbjct 363 TTGCTATCTCCCGTAGGAGTTTGGATTGTGTCTCAGTCCTAGTGTGGTTGATCATCCTCT 304
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
|||| | ||| ||||| | | ||| | || || | || |||| |||||
Sbjct 303 CAGACCAGCTACTGATCGTCGTATTGGTAAGATATTGCCTCACCAACTAGCTAAT 249
>seq553357
Length=280
Score = 77.0 bits (84), Expect = 7e-12
Identities = 75/97 (77%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174
|||||| | | ||||| || | || ||| |||||| |||| ||||| ||| ||||| |
Sbjct 277 TCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACGACTGCCCC 218
Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGG 211
|||| ||||| || ||||||||||| ||| |||||
Sbjct 217 CCGTGGGAGTCCGGGACGTGTCTCAGTCCCAGTGTGG 181
>seq511650
Length=600
Score = 75.2 bits (82), Expect = 2e-11
Identities = 86/116 (74%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 113 CTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCC 172
|| ||||| || | ||| |||| | ||| |||||| || | ||| || |||| |
Sbjct 181 CTCCACGCGACATTGCTCCATCAGGATTTCGCCCATTGTGAAAAACTCCCCATTGCTATC 240
Query 173 TCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228
||||||||||||||||| |||||||||| | | ||||| || | || |||||||
Sbjct 241 TCCCGTAGGAGTTTGGATTGTGTCTCAGTACTAGTGTGGTTGATCATCTTCTCAGA 296
>seq595140
Length=218
Score = 73.4 bits (80), Expect = 8e-11
Identities = 62/74 (84%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 157 ATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGT-CTCAGTTCCAAT-GTGGGGG 214
||||| |||||||||||||||||||||| ||| |||||| |||||| ||| | |||| |
Sbjct 3 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTACTCAGTCCCAGTAGTGGCTG 62
Query 215 ACCTTCCTCTCAGA 228
| | ||||||| ||
Sbjct 63 ATCATCCTCTCGGA 76
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1060718536000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |