Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20aestivalis_20[genbank_20GCA_5F001562795.1_202016-02-17] 756,125 sequences; 432,755,284 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq681135 127 2e-24 >seq681135 Length=1827 Score = 127 bits (140), Expect = 2e-24 Identities = 360/548 (66%), Gaps = 15/548 (3%) Strand=Plus/Minus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| ||||| || || || || ||||| | ||||| ||||| | || | ||| Sbjct 1110 ATGTACAAGAAGGCCGAGGCGTCGTTTTGGACCGCCGAGGAAGTCGACCTCTCTCAGGAC 1051 Query 61156 ATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 | | | ||||| | | |||| || | || ||||| | ||| | | || Sbjct 1050 CAGCGTCAATGGGAAAACCTCACCAGCGACGAGAAGCACTTCATCAGTCATATCCTTGCC 991 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAG 61275 ||||| |||||||| ||||| |||||| || ||| | | | | ||| | ||||| Sbjct 990 TTCTTCGCCGCTTCTGACGGAATCGTCCTCGAAAATCTCGCCGGAAGGTTCATGAAGGAG 931 Query 61276 GTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCAC 61335 || || || || ||||| ||| ||||| || || ||||||||||| || || ||||| Sbjct 930 GTCCAGGTCTCCGAGGCTCGTGCCTTCTATGGATTTCAGATTGCCATTGAAAACATCCAC 871 Query 61336 TCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC---GGGCGGAACGTGAA 61392 || |||||||||||| | | | || |||| |||| ||| | || | || || Sbjct 870 TCTGAGATGTACAGTCTGTTGTTAGAATCGTATATCAAGGATCCAAAGGAGAAA----AA 815 Query 61393 C-GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG--GAAAGCGGATTGGGCC 61449 | | | || | || ||||| || || || | ||| ||| |||||| | ||||| Sbjct 814 CAGGCTCTTTCACGCAATCGATACCATCCC--CTGTGTGGCGAAGAAAGCCCAGTGGGCT 757 Query 61450 TTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509 || |||||| | | | | || |||| ||||| |||| ||||| || Sbjct 756 CTCCGATGGATCGACGG---CTCCGAAACCTTTGCCGAACGCCTGCTCGCATTCGCCTGC 700 Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 || || || | || ||| ||| || | | || || ||| | |||||||| || Sbjct 699 GTGGAAGGCATCTTCTTCTCCGGAAGCTTCTGCTCGATATTCTGGCTAAAGAAACGCGGT 640 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||| || | || ||| |||||||| || || || ||||||||| | || || Sbjct 639 CTCATGCCGGGATTAACTTTCTCAAATGAGTTAATCTCGCGAGACGAGGGCTTACACTGC 580 Query 61630 GATTTTGC 61637 ||||| || Sbjct 579 GATTTCGC 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393904302170000