Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1
_202015-09-10] 210,444 sequences; 539,624,286 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq122661 212 2e-52
seq82610 212 2e-52
seq170456 208 2e-51
seq141854 154 4e-35
seq39935 114 4e-23
seq199355 111 5e-22
seq10531 109 2e-21
seq4020 107 6e-21
seq198256 102 2e-19
seq163130 96.9 1e-17
seq173905 84.2 7e-14
seq10424 77.0 1e-11
seq186839 75.2 3e-11
>seq122661
Length=936
Score = 212 bits (234), Expect = 2e-52
Identities = 219/286 (77%), Gaps = 2/286 (1%)
Strand=Plus/Minus
Query 87 AACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCCCCTTCGGGG 146
|||||||| | ||||||| | ||| ||||| || | ||||| | || |||||
Sbjct 733 AACCTTACTTAGGATTGACATGTTGTGAATCCTCTTGAAAGAGAGGAGTGCCTTTCGGAA 674
Query 147 GACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAG 206
||| | ||||| ||||||||||||||||||| ||||||| || ||||||||||||
Sbjct 673 TGTAGAC--ATAGGTGGTGCATGGTTGTCGTCAGCTTGTGTCGTAAGGTGTTGGGTTAAG 616
Query 207 TCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTT 266
|||| ||| |||| |||||||| || |||||||||| | || | || || || || ||
Sbjct 615 TCCCACAATGAGCACAACCCTTGAGTTTAGTTGCCACCCTTGAATTTGGAACCCTGAGCA 556
Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326
|| | | || || || |||||||||| ||| ||| |||| |||||||| ||||||||
Sbjct 555 GATTTTTGAGGATAAGCCAGAGGAAGGTGAGGATGACTTCAAGTCATCATGTCCCTTATG 496
Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGA 372
||||||||||||| |||||||||| ||| ||||| ||| ||||
Sbjct 495 CCTTGGGCTACACACATGCTACAATGACCAAGACAAAAGGCCGCGA 450
>seq82610
Length=1271
Score = 212 bits (234), Expect = 2e-52
Identities = 219/286 (77%), Gaps = 2/286 (1%)
Strand=Plus/Minus
Query 87 AACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCCCCTTCGGGG 146
|||||||| | ||||||| | ||| ||||| || | ||||| | || || ||
Sbjct 383 AACCTTACTTAGGATTGACATGTTGTGAATCCTCTTGAAAGAGAGGAGTGCCTTTTGGAA 324
Query 147 GACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAG 206
||| | ||||| ||||||||||||||||||| ||||||| || ||||||||||||
Sbjct 323 TGTAGAC--ATAGGTGGTGCATGGTTGTCGTCAGCTTGTGTCGTAAGGTGTTGGGTTAAG 266
Query 207 TCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTT 266
|||||||| |||| |||||||| || |||||||||| | || | || || || || ||
Sbjct 265 TCCCGCAATGAGCACAACCCTTGAGTTTAGTTGCCACCCTTGAATTTGGAACCCTGAGCA 206
Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326
|| | | || || || |||||||||| ||| ||| |||| |||||||| ||||||||
Sbjct 205 GATTTTTGAGGATAAGCCAGAGGAAGGTGAGGATGACTTCAAGTCATCATGTCCCTTATG 146
Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGA 372
||||||||||||| |||||||||| ||| ||||| ||| ||||
Sbjct 145 CCTTGGGCTACACACATGCTACAATGACCAAGACAAAAGGCCGCGA 100
>seq170456
Length=1356
Score = 208 bits (230), Expect = 2e-51
Identities = 243/322 (75%), Gaps = 7/322 (2%)
Strand=Plus/Minus
Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66
||||| |||||||||||||| |||||| | | ||||||||||||||||||| ||||
Sbjct 478 CGCAAAAATGAAACTCAAAGGA-TTGACGAGATTCTGCACAAGCGGTGGAGCATGGGGTT 420
Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126
|||||| | |||| | ||||||||||||||| ||||||| ||| ||||| || |
Sbjct 419 TAATTCAATGCAAAGTGAAGAACCTTACCAAGGATTGACATGTCGTGAATCCTCTTGAAA 360
Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAG--GTGATGCATGGTTGTCGTCAGCTCG 184
||| | | || |||| | | | | |||| ||| ||||||| | ||| || |
Sbjct 359 AAGAAGGGTGCC-TTCGAG--AATGCG-GACAAAAGTGGTGCATGGCTATCGCCAATTTA 304
Query 185 TGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATC 244
|||||| || ||| |||||||||||||| |||| ||||||| | | |||||||||| |
Sbjct 303 TGTCGTAAGGTGTCAAGTTAAGTCCCGCAATGAGCTCAACCCTCATGTTTAGTTGCCACC 244
Query 245 ATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACG 304
|| |||| | ||| | || ||||| ||||| ||| |||||||||||| ||| | |
Sbjct 243 GTTGAGTTTGACACCTTTAGCGAACTGCTGGTGATAAATCGGAGGAAGGTGAGGATCATG 184
Query 305 TCAAATCATCATGCCCCTTATG 326
|||| |||||||||| ||||||
Sbjct 183 TCAAGTCATCATGCCTCTTATG 162
>seq141854
Length=7082
Score = 154 bits (170), Expect = 4e-35
Identities = 167/218 (77%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 280 AAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACAC 339
|| || |||||||||| ||| || ||||| ||||||||||| ||||| | |||| ||||
Sbjct 2445 AAGCCAGAGGAAGGTGAGGATGATGTCAAGTCATCATGCCCTTTATGCCTCGGGCGACAC 2386
Query 340 ACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAA 399
| |||||||||||| | | |||||| | | || || ||||| || || ||| ||
Sbjct 2385 ATGTGCTACAATGGCCGAGACAAAGAGTCGTGATCCCACGAGGGTGAGTTAAATCCAAAA 2326
Query 400 AGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGT 459
| || |||||||||||||| || || ||||||| || |||||||| |||||||||| |
Sbjct 2325 ACCAGTCCTCAGTTCGGATTGCAGGCTACAACTCGCCTGTATGAAGCCGGAATCGCTAAT 2266
Query 460 AATCGTA-GATCAG-CATGCTACGGTGAATACGTTCCC 495
|||| || || || ||| | | ||||||| ||||||
Sbjct 2265 AATCATATGA--AGCCATACGATGGTGAATTTGTTCCC 2230
>seq39935
Length=6080
Score = 114 bits (126), Expect = 4e-23
Identities = 175/247 (71%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 249 AGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAA 308
|||| || ||| | ||| |||| | |||| ||| | | || |||| ||| || |||||
Sbjct 1772 AGTTTGGAACT-TGAGTAGACTACTAGTGATAAATCAAATGAGGGTGAGGATGATGTCAA 1714
Query 309 ATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCA 368
| ||||||||||||||| ||||| ||||| || ||||||||| |||| |||
Sbjct 1713 GTTATCATGCCCCTTATGCCTTGGGTGACACAAGTACTACAATGGTTGGGACAATGGGAC 1654
Query 369 GCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGC 428
|||| | ||||| | | || ||| ||| |||| ||| ||| ||||||| || |
Sbjct 1653 GCGATCTCACGAGGGTGAACTAACTCCAAAAACTTGTCATCAATTCAGATTGTAAGCTAC 1594
Query 429 AACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTACGGTGAAT 487
||||| ||| |||||| |||| |||||||| | || || ||| | | || ||||
Sbjct 1593 AACTCTCCTACATGAAGTCAAAATCACTAGTAATTGCCAATTAGCCATACAATGGCGAAT 1534
Query 488 ACGTTCC 494
||||||
Sbjct 1533 TCGTTCC 1527
>seq199355
Length=4346
Score = 111 bits (122), Expect = 5e-22
Identities = 189/271 (70%), Gaps = 5/271 (2%)
Strand=Plus/Plus
Query 192 AGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGT 251
|| ||||| || || |||| ||| ||| | |||||| | | ||||||| || |||| |||
Sbjct 456 AGGTGTTGAGTAAAATCCCACAATGAGTGTAACCCTCA-GTTTAGTTGTCACCATTGAGT 514
Query 252 TGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATC 311
| || | | || |||| | || || | | ||||||||| ||| ||| |||| ||
Sbjct 515 TTGGAATCTTGGGTAGACTCTCATTGCTAAGCAGAAGGAAGGTGAGGATGACATCAAGTC 574
Query 312 ATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCG 371
|||||| ||||||| | || |||||| ||||||||||| ||| ||||||||| ||
Sbjct 575 ATCATGGTCCTTATGCCCCGAGCAACACACTTGCTACAATGGTCAAGACAAAGGGCTACG 634
Query 372 ---AAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGC 428
| || | || ||| || ||| ||| ||| || |||||| | ||||
Sbjct 635 ATCACACAAAGGGGGTGAGCCAACTCCA-AAAACCCACCTCCATTTGGATTGCAAGCTGC 693
Query 429 AACTCGACTATATGAAGCTGGAATCGCTAGT 459
|||||| || |||||| | || || |||||
Sbjct 694 AACTCGCCTGCATGAAGTTAGAGTCACTAGT 724
>seq10531
Length=4488
Score = 109 bits (120), Expect = 2e-21
Identities = 188/271 (69%), Gaps = 4/271 (1%)
Strand=Plus/Minus
Query 192 AGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGT 251
|| ||||| || || || ||||| ||||| |||||| | | ||||||| || |||| |||
Sbjct 3977 AGGTGTTGAGTAAAATCACGCAATGAGCGTAACCCTCATGTTTAGTTGTCACCATTGAGT 3918
Query 252 TGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATC 311
| || | | | |||| | || || | | ||||||||| ||| ||| |||| ||
Sbjct 3917 TTGGAATCTTGGGCAGACTCTCATTGCTAAGCAGAAGGAAGGTGAGGATGACATCAAGTC 3858
Query 312 ATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCG 371
|||||| ||||||| || |||||| ||||||||||| ||| ||||||||| ||
Sbjct 3857 ATCATGGTCCTTATGCCCCAAGCAACACACTTGCTACAATGGTCAAGACAAAGGGCTACG 3798
Query 372 ---AAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGC 428
| || | || ||| || ||| ||| ||| || |||||| | ||||
Sbjct 3797 ATCACACAAAGGGGGTGAGCCAACTCCA-AAAACCCACCTCCATTTGGATTGCAAGCTGC 3739
Query 429 AACTCGACTATATGAAGCTGGAATCGCTAGT 459
|||||| || |||||| | || || |||||
Sbjct 3738 AACTCGCCTGCATGAAGTTAGAGTCACTAGT 3708
>seq4020
Length=5217
Score = 107 bits (118), Expect = 6e-21
Identities = 130/173 (75%), Gaps = 3/173 (2%)
Strand=Plus/Plus
Query 285 GGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTG 344
||||||| ||| || || |||| ||||||||||||||||| |||| |||||||||
Sbjct 1406 GGAGGAAAGTGAAGATGATATCAAGTCATCATGCCCCTTATGCCCTGGGTGACACACGTG 1465
Query 345 CTACAATGGACAATACAAAGGGCAGCGAAACCGCGA-GGTCAAGCAAATCCCATAAAGTT 403
||||||| | | ||||||| || | |||||| |||||| | || ||| |||
Sbjct 1466 TTACAATGATCGAAACAAAGGATCGC-ATTCCGCGAGGGTCAA-CTAACTCCAAAAACAC 1523
Query 404 GTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCT 456
|| || |||| ||||| | ||||||||| ||||||||||||| |||| ||
Sbjct 1524 GTCCTTAGTTAGGATTACAAGCTGCAACTCACCTATATGAAGCTGAAATCACT 1576
>seq198256
Length=10162
Score = 102 bits (112), Expect = 2e-19
Identities = 74/86 (86%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 167 ATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCC 226
|||||| |||||||||| |||||| || |||||||||||||||| |||| ||||||||||
Sbjct 5894 ATGGTTTTCGTCAGCTCATGTCGTAAGGTGTTGGGTTAAGTCCCACAACAAGCGCAACCC 5953
Query 227 TTAAGCTTAGTTGCCATCATTAAGTT 252
| | | |||||||||| | || ||||
Sbjct 5954 TCATGTTTAGTTGCCACCGTTGAGTT 5979
>seq163130
Length=3520
Score = 96.9 bits (106), Expect = 1e-17
Identities = 94/120 (78%), Gaps = 1/120 (1%)
Strand=Plus/Plus
Query 369 GCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGC 428
|||| |||| ||| ||| || ||| ||| || ||||||||||||||||| ||||
Sbjct 3401 GCGATCCCGCAAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGTAGGCTGC 3460
Query 429 AACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTACGGTGAAT 487
|||||| || ||||||| ||||||||||||||||| | |||| ||| | ||||||||
Sbjct 3461 AACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAAT 3520
>seq173905
Length=13154
Score = 84.2 bits (92), Expect = 7e-14
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 8 GCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTT 67
||||| ||||||||||||||||| || || | ||||||||| ||||| ||||| |||
Sbjct 12687 GCAAGAATGAAACTCAAAGGAATTAACAGGAGTCTGCACAAGCGATGGAGGATGTGATTT 12746
Query 68 AATTCGAAGCAACGCGAAGAA 88
|||| || |||| ||||||||
Sbjct 12747 AATTTGATGCAAAGCGAAGAA 12767
>seq10424
Length=2673
Score = 77.0 bits (84), Expect = 1e-11
Identities = 87/114 (76%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 213 AACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGC 272
||| || | ||| |||| |||||||||| | |||||| || || ||||||| ||||
Sbjct 2239 AACAAGTGTAACACTTATGCTTAGTTGCTACCATTAACTTCAACA-TCTAAGTAGACTAT 2181
Query 273 CGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAA-TCATCATGCCCCTTAT 325
|||||| || | || |||||| ||| | | ||||| ||||||||||| ||||
Sbjct 2180 CGGTGATAAGCTAAAGAAAGGTGAGGATGCCATCAAAATCATCATGCCCTTTAT 2127
>seq186839
Length=3665
Score = 75.2 bits (82), Expect = 3e-11
Identities = 68/86 (79%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 268 ACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGA 327
|||||| |||| ||| || || || ||| ||| ||| ||||||||||||| ||| |||
Sbjct 2013 ACTGCCAGTGATAAATCGAAGAAATGTGAGGATGACAGCAAATCATCATGCTCCTAATGC 1954
Query 328 TTTGGGCTACACACGTGCTACAATGG 353
| || ||||||||||||||||||
Sbjct 1953 CCTAAGCGACACACGTGCTACAATGG 1928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1500834922240
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