Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1
_202015-09-10] 210,444 sequences; 539,624,286 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq74092 167 5e-39
seq37867 86.0 1e-14
>seq74092
Length=2799
Score = 167 bits (184), Expect = 5e-39
Identities = 153/192 (80%), Gaps = 6/192 (3%)
Strand=Plus/Minus
Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268
||||||| | || |||| ||||| | |||||| |||| || ||| || |||||||
Sbjct 1709 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 1653
Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328
|||||||||||| |||| ||||||||||||||||||||| |||||||||||||| ||
Sbjct 1652 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 1593
Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388
| ||| |||||| ||||| ||| | ||||||| ||||||| | ||||||||||
Sbjct 1592 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 1533
Query 389 GTTTCCCTCTCG 400
||||||||||||
Sbjct 1532 GTTTCCCTCTCG 1521
>seq37867
Length=3445
Score = 86.0 bits (94), Expect = 1e-14
Identities = 105/142 (74%), Gaps = 1/142 (1%)
Strand=Plus/Plus
Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318
|| || || |||| ||||| |||||||||||||| ||||| || | | || |||||| ||
Sbjct 2141 CTCGATCAATGAGTTATTATGCACTCTTTCAAGGGTGGCTACTCCTAGGCAAACCTCTTG 2200
Query 319 GTTGTCTACGCA-ACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGA 377
||||||| ||| || || | |||| |||| || || |||| |||||||||
Sbjct 2201 GTTGTCTCTGCACTCTTTACCTTCTTTATCACTAAGCAGTCATCTAGGAGCCTTAGCTAG 2260
Query 378 TGATCTGGGCTGTTTCCCTCTC 399
||||| ||| ||||||| ||
Sbjct 2261 TGATCCACGCTATTTCCCTTTC 2282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1175121811456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |