Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq74092 167 5e-39 seq37867 86.0 1e-14 >seq74092 Length=2799 Score = 167 bits (184), Expect = 5e-39 Identities = 153/192 (80%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| || ||| || ||||||| Sbjct 1709 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 1653 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 1652 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 1593 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 1592 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 1533 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 1532 GTTTCCCTCTCG 1521 >seq37867 Length=3445 Score = 86.0 bits (94), Expect = 1e-14 Identities = 105/142 (74%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 || || || |||| ||||| |||||||||||||| ||||| || | | || |||||| || Sbjct 2141 CTCGATCAATGAGTTATTATGCACTCTTTCAAGGGTGGCTACTCCTAGGCAAACCTCTTG 2200 Query 319 GTTGTCTACGCA-ACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGA 377 ||||||| ||| || || | |||| |||| || || |||| ||||||||| Sbjct 2201 GTTGTCTCTGCACTCTTTACCTTCTTTATCACTAAGCAGTCATCTAGGAGCCTTAGCTAG 2260 Query 378 TGATCTGGGCTGTTTCCCTCTC 399 ||||| ||| ||||||| || Sbjct 2261 TGATCCACGCTATTTCCCTTTC 2282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175121811456