Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq10187 96.9 6e-18 >seq10187 Length=4231 Score = 96.9 bits (106), Expect = 6e-18 Identities = 182/268 (68%), Gaps = 6/268 (2%) Strand=Plus/Minus Query 5 TCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGGGAGA 64 ||| ||||| ||| | ||||| || ||||||||| |||| || || | |||| || Sbjct 3438 TCAGTGTCCGAGGTCGTGTGTCGGTGTGGGTAAAGATGGGAAGCTGTTTAGCTGGGCCGA 3379 Query 65 GTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCTTGGT 124 || ||| || || || || || || | || || | || || |||| | | Sbjct 3378 ATCGGACACGGCGGTGGGCGTGGGGGCTTGTGCAGTCGACTTAGGAGACTGGACACTTTT 3319 Query 125 TACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACAAAAA 184 ||||| |||| ||| || || || ||||| |||||||| || || | | ||| Sbjct 3318 GACCGGCTCGGCTTACCAGGGTGCACCACAAGGGTTCTTTTTGGTGGAGAG------AAA 3265 Query 185 GGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGT 244 ||| || |||||| | |||||| | || || || |||| |||||| |||||||| Sbjct 3264 GGAAGGACAAAATGGGAAATTGGAGAGAATAGAAGTGGGGGATGGATTTTCGGGATTTGT 3205 Query 245 GCAATCTGGATGCTGTGTGGAGATCTGA 272 ||||| || || || |||||||||||| Sbjct 3204 ACAATCAGGGTGTTGCGTGGAGATCTGA 3177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 916467282304