Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1
_202015-09-10] 210,444 sequences; 539,624,286 total letters
Query= AAMG01001756.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq10187 96.9 6e-18
>seq10187
Length=4231
Score = 96.9 bits (106), Expect = 6e-18
Identities = 182/268 (68%), Gaps = 6/268 (2%)
Strand=Plus/Minus
Query 5 TCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGGGAGA 64
||| ||||| ||| | ||||| || ||||||||| |||| || || | |||| ||
Sbjct 3438 TCAGTGTCCGAGGTCGTGTGTCGGTGTGGGTAAAGATGGGAAGCTGTTTAGCTGGGCCGA 3379
Query 65 GTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCTTGGT 124
|| ||| || || || || || || | || || | || || |||| | |
Sbjct 3378 ATCGGACACGGCGGTGGGCGTGGGGGCTTGTGCAGTCGACTTAGGAGACTGGACACTTTT 3319
Query 125 TACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACAAAAA 184
||||| |||| ||| || || || ||||| |||||||| || || | | |||
Sbjct 3318 GACCGGCTCGGCTTACCAGGGTGCACCACAAGGGTTCTTTTTGGTGGAGAG------AAA 3265
Query 185 GGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGT 244
||| || |||||| | |||||| | || || || |||| |||||| ||||||||
Sbjct 3264 GGAAGGACAAAATGGGAAATTGGAGAGAATAGAAGTGGGGGATGGATTTTCGGGATTTGT 3205
Query 245 GCAATCTGGATGCTGTGTGGAGATCTGA 272
||||| || || || ||||||||||||
Sbjct 3204 ACAATCAGGGTGTTGCGTGGAGATCTGA 3177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 916467282304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |