Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1
_202015-09-10] 210,444 sequences; 539,624,286 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq177777 77.0 6e-12
seq74092 77.0 6e-12
seq72437 73.4 7e-11
>seq177777
Length=896
Score = 77.0 bits (84), Expect = 6e-12
Identities = 63/77 (82%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228
|||||||||||||||| ||||||| ||||| |||||||||||||| || |||||
Sbjct 77 GCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 18
Query 229 GGCGAGCGAAATGGGAT 245
||||||||| | ||||
Sbjct 17 GGCGAGCGAGAGCGGAT 1
>seq74092
Length=2799
Score = 77.0 bits (84), Expect = 6e-12
Identities = 63/77 (82%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228
|||||||||||||||| ||||||| ||||| |||||||||||||| || |||||
Sbjct 346 GCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 405
Query 229 GGCGAGCGAAATGGGAT 245
||||||||| | ||||
Sbjct 406 GGCGAGCGAGAGCGGAT 422
>seq72437
Length=2941
Score = 73.4 bits (80), Expect = 7e-11
Identities = 81/107 (76%), Gaps = 1/107 (1%)
Strand=Plus/Minus
Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195
|| ||||| ||| || | |||| | ||| ||||||| |||||||| |||||| |
Sbjct 884 TGTTGAATCCATGGGCAGGCAAGAAACAACCTAGCGAACTAAAACATCTTAGTAGCCAAA 825
Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGG 242
|||||||||| ||| | ||||||| ||||||| |||| ||||||
Sbjct 824 GGAAAAGAAAGCAAAAGTGATTCCCGTAGTAGTGATGAGCAAAATGG 778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 916467282304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |