Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1
_202015-09-10] 210,444 sequences; 539,624,286 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq206155 697 0.0
seq14572 208 2e-51
seq14571 152 2e-34
seq91407 145 2e-32
seq84775 143 9e-32
seq118487 111 5e-22
seq198982 102 3e-19
seq113934 100 9e-19
seq39337 96.9 1e-17
seq206148 95.1 4e-17
seq166493 93.3 1e-16
seq40962 87.8 6e-15
seq153649 78.8 3e-12
seq67961 78.8 3e-12
seq21957 78.8 3e-12
>seq206155
Length=6340
Score = 697 bits (772), Expect = 0.0
Identities = 476/532 (89%), Gaps = 4/532 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 3557 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 3616
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 3617 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 3676
Query 127 GGCCCGC--GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATT 184
||| ||| | | |||| ||| || || | ||| || |||| ||||
Sbjct 3677 GGCGCGCTGGGCGCGCCTTGGGTCCAAAAGGAGGG-GATGATCCCCGCCTCCGATTCACG 3735
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGCTCCCAC 243
|| ||||||||| |||| ||| ||||||||||||||||| ||||| | |||||||||
Sbjct 3736 GAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGCTCCCAC 3795
Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3796 TTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 3855
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3856 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAG 3915
Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3916 ACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 3975
Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3976 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 4035
Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 4036 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTGAGCATC 4087
>seq14572
Length=4867
Score = 208 bits (230), Expect = 2e-51
Identities = 177/220 (80%), Gaps = 16/220 (7%)
Strand=Plus/Minus
Query 316 TGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 375
|||||| || ||||| || | ||| |||||||||||||||| ||||| |||||||||
Sbjct 3002 TGATTCTGCTAAGCCTATTTCTCTGGTTGTGGTTTCGCTAGAT-GTAGAAAGGGACAGTA 2944
Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435
||||||||||| ||||||||||| || | |||||||| ||||||
Sbjct 2943 ACAATCTCGTTAACCCATTCATGCGTGTTATTAATTAGA---------------CTACCT 2899
Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495
||||||||||||||||||| || ||||||| |||| |||| |||||||||||||||||||
Sbjct 2898 TAAGAGAGTCATAGTTACTTCCACCGTTTATCCGCACTTGATTGAATTTCTTCACTTTGA 2839
Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||| ||||| ||||||||||||||||| ||| | ||||
Sbjct 2838 CATTTAGAGCGTTGGGCAGAAATCACATTACGTGAGCATC 2799
>seq14571
Length=4937
Score = 152 bits (168), Expect = 2e-34
Identities = 158/209 (76%), Gaps = 16/209 (8%)
Strand=Plus/Minus
Query 316 TGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 375
|||||| | ||||| || | |||| |||||||| ||| ||| ||| | ||||| |||
Sbjct 1809 TGATTCTACTAAGCCTATTTCTTTGGTTGTGGTTTTGCTGGAT-GTAAAAAGGGATAGTA 1751
Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435
||||||| ||||||||||||||| | | | |||||||| ||| ||
Sbjct 1750 AGAATCTCATTAATCCATTCATGCACATTATTAATTAGA---------------CTATCT 1706
Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495
||||||||||||| | ||||| |||||| || |||| |||||||||||||||||||
Sbjct 1705 TAAGAGAGTCATAACTGCTCCCATCGTTTATTCGTACTTGATTGAATTTCTTCACTTTGA 1646
Query 496 CATTCAGAGCACTGGGCAGAAATCACATT 524
||| |||||| |||| ||||||||||||
Sbjct 1645 TATTTAGAGCATTGGGTAGAAATCACATT 1617
>seq91407
Length=2543
Score = 145 bits (160), Expect = 2e-32
Identities = 159/209 (76%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC--GGCTCCCACTT 245
||| ||||| |||| ||| | ||||||||||||||| | | | |||||| ||||
Sbjct 1033 TAAATAAAATAACGTTAAAAGCAGTGGTATTTCACTTTCTCTGTTTTTTGGCTCCTACTT 1092
Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
|| |||| | || |||||||||| ||||| |||| ||||||| |||||| | ||||
Sbjct 1093 ATCTTACATTTTTCGAGTCATTTCAAAAAGTTAAACTAAAGTCAAGTTCAACAAGATCTT 1152
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
||||| || | || || | | | | |||| |||||| | ||| |||||||||||||
Sbjct 1153 CTTTCTTCGTTAGTTTCGACGAACACATTCCATTGGCTATATTTT-GCTAGATAGTAGAG 1211
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATT 394
||||| | || ||||||||||||||||||
Sbjct 1212 AGGGATAATGAGAATCTCGTTAATCCATT 1240
>seq84775
Length=5954
Score = 143 bits (158), Expect = 9e-32
Identities = 197/279 (71%), Gaps = 25/279 (9%)
Strand=Plus/Plus
Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
|||||| ||||||| |||||||||| | |||| |||| |||||||||||||||| ||||
Sbjct 5613 ATTCTATACCTCTCGAGTCATTTCATAGAGTCAAACTAAAGTCAAGCTCAACAGG-TCTT 5671
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
||||||| || || |||||| ||||||||| | ||| ||||
Sbjct 5672 CTTTCCCTACT----------------TTTCCTTGGTTGTGGTTTCATTGAATACTAGAC 5715
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425
| ||| | ||||| ||| ||| || ||| |||| | | |||||| | ||| |||
Sbjct 5716 AAAAACAATAAAAATCTAGTTCATCTATCCATATGCGTGATTGCTTAGATAATGAGACAT 5775
Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485
||| | | |||||||||||||| |||| || || | | || ||||||||||
Sbjct 5776 TTGACGAGCTTAAGAGAGTCATGGTTAATC--------TATTTGTGTTTAGTTGAATTTC 5827
Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524
| | ||| ||||||| |||||| | |||||| |||||
Sbjct 5828 CTTATTTTAACATTCAAAGCACTTAGTAGAAATTACATT 5866
>seq118487
Length=7640
Score = 111 bits (122), Expect = 5e-22
Identities = 98/122 (80%), Gaps = 1/122 (1%)
Strand=Plus/Plus
Query 272 AAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC 331
||||| |||| ||||||| |||||| | ||||||||| ||| || || || ||| |||
Sbjct 6150 AAAGTANNACTAAAGTCAAGTTCAACAAGATCTTCTTTCTCCGTTGTTTTCGACAAACCC 6209
Query 332 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 391
||||| ||||||||| ||| |||| ||||||| || ||| ||||||||||||||||
Sbjct 6210 GTTCCATTGGCTGTGTTTT-GCTAAATAGTAGGCAGAAACAACGGGAATCTCGTTAATCT 6268
Query 392 AT 393
||
Sbjct 6269 AT 6270
>seq198982
Length=7407
Score = 102 bits (112), Expect = 3e-19
Identities = 97/124 (78%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 411 TAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC 470
||||||| || ||||| |||| ||||||||||| ||||||||| | || |||| ||
Sbjct 1271 TAGATGATAAGACATTTTGCTATCTTAAGAGAGTTATAGTTACTTCTACCATTTATTCGT 1330
Query 471 GCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530
|||| | ||||| || ||||||||||| |||||||| |||| ||||| |||| || |
Sbjct 1331 GCTTAACTAAATTTATTTACTTTGACATTTAGAGCACTAGGCAAGAATCATATTGTGTGA 1390
Query 531 ACAT 534
|||
Sbjct 1391 GCAT 1394
>seq113934
Length=2984
Score = 100 bits (110), Expect = 9e-19
Identities = 105/133 (79%), Gaps = 5/133 (4%)
Strand=Plus/Plus
Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG-C 342
||||| |||| |||||||| || || | | |||| | ||||| || |||| ||| |
Sbjct 1842 GAGTCGAGCTTAACAGGGTTTTTTTAAC--GTTGAT-CTGCCAAACCGGTTCTCTTAAAC 1898
Query 343 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 402
|||||||||| | ||||||||| |||| ||| ||||||||||| ||||||| | || ||
Sbjct 1899 TGTGGTTTCGTTGGATAGTAGAGAGGGT-AGTTGGAATCTCGTTGATCCATTAACGCACG 1957
Query 403 TCACTAATTAGAT 415
||||| |||||||
Sbjct 1958 TCACTCATTAGAT 1970
>seq39337
Length=3241
Score = 96.9 bits (106), Expect = 1e-17
Identities = 103/132 (78%), Gaps = 7/132 (5%)
Strand=Plus/Plus
Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343
||||| |||| |||||||| || || | | |||| | ||||| ||||||| ||| ||
Sbjct 364 GAGTCGAGCTTAACAGGGTTTTTTTAAC--GTTGAT-CTGCCAAACCCGTTCTCTTAACT 420
Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403
|||||||| | ||||||||| |||| | ||||||||| |||||||||| | | |||
Sbjct 421 GTGGTTTCTTTGGATAGTAGAGAGGGT-ATTGGGAATCTAGTTAATCCAT---TACACGT 476
Query 404 CACTAATTAGAT 415
|||| |||||||
Sbjct 477 CACTCATTAGAT 488
>seq206148
Length=2226
Score = 95.1 bits (104), Expect = 4e-17
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| || | ||||||||||| |||| ||| | |||||||||||| ||||||
Sbjct 1913 CTTTTATTCCATAGGAGATTTCTATTCTAGTTGATCTCATCTTAGGACACCTACGTTATC 1972
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||||| ||||||| | ||| |||||||||||||||| ||||||||
Sbjct 1973 TTTTAATAGATGTGTCATCCCTGCCAAACTCCCCACCTAACAATGTC 2019
>seq166493
Length=14661
Score = 93.3 bits (102), Expect = 1e-16
Identities = 70/82 (85%), Gaps = 3/82 (4%)
Strand=Plus/Minus
Query 350 TCGCTAGATAGTAGATAGGGACAGTGGG---AATCTCGTTAATCCATTCATGCGCGTCAC 406
|| || ||||||||| ||||||||| || |||||||| ||||||||| ||| || ||
Sbjct 2466 TCCCTGGATAGTAGACAGGGACAGTCGGGAAAATCTCGTCAATCCATTCTTGCCCGGAAC 2407
Query 407 TAATTAGATGACGAGGCATTTG 428
||||||||||||||||||||||
Sbjct 2406 TAATTAGATGACGAGGCATTTG 2385
>seq40962
Length=8421
Score = 87.8 bits (96), Expect = 6e-15
Identities = 75/92 (82%), Gaps = 3/92 (3%)
Strand=Plus/Minus
Query 350 TCGCTAGATAGTAGATAGGGACAGTGGG---AATCTCGTTAATCCATTCATGCGCGTCAC 406
|| || ||| ||||| ||||||||| | |||||||| ||||||||| ||| || ||
Sbjct 7512 TCCCTGGATTGTAGACAGGGACAGTCCGGAAAATCTCGTCAATCCATTCTTGCCCGGAAC 7453
Query 407 TAATTAGATGACGAGGCATTTGGCTACCTTAA 438
|||||||||||||||||||||| | ||||||
Sbjct 7452 TAATTAGATGACGAGGCATTTGATTGCCTTAA 7421
>seq153649
Length=14578
Score = 78.8 bits (86), Expect = 3e-12
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 14222 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 14281
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| |||||||||||| | ||||
Sbjct 14282 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 14327
>seq67961
Length=1552
Score = 78.8 bits (86), Expect = 3e-12
Identities = 112/156 (72%), Gaps = 10/156 (6%)
Strand=Plus/Plus
Query 180 TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA----CG 235
|||| | |||||||| | | ||| ||||| |||||||||| || | | |
Sbjct 1347 TCATGAAATAAGTAAACTACTGTTAAAAGTAGTAGTATTTCACT----CCAACATTTCCA 1402
Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295
|||| |||||| || ||||| ||||||||||| |||| ||||||| ||||||| |
Sbjct 1403 ACTCCTACTTATCCTTTGCCTCT--AGTCATTTCACGAAGTTAGACTAGACTCAAGCTAA 1460
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC 331
||||||| | |||| | ||||| |||||||||
Sbjct 1461 GCAGGGTCATTTTTCTTCATTGATTTTGCCAAGCCC 1496
>seq21957
Length=3864
Score = 78.8 bits (86), Expect = 3e-12
Identities = 112/156 (72%), Gaps = 10/156 (6%)
Strand=Plus/Minus
Query 180 TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA----CG 235
|||| | |||||||| | | ||| ||||| |||||||||| || | | |
Sbjct 1544 TCATGAAATAAGTAAACTACTGTTAAAAGTAGTAGTATTTCACT----CCAACATTTCCA 1489
Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295
|||| |||||| || ||||| ||||||||||| |||| ||||||| ||||||| |
Sbjct 1488 ACTCCTACTTATCCTTTGCCTCT--AGTCATTTCACGAAGTTAGACTAGACTCAAGCTAA 1431
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC 331
||||||| | |||| | ||||| |||||||||
Sbjct 1430 GCAGGGTCATTTTTCTTCATTGATTTTGCCAAGCCC 1395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1631758819712
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