Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq120100 86.0 1e-14 seq170457 77.0 7e-12 >seq120100 Length=747 Score = 86.0 bits (94), Expect = 1e-14 Identities = 78/96 (81%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 135 AGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTG 194 || || ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||| Sbjct 146 AGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTG 205 Query 195 TCTCAGTTCCAAT-GTGGGGGACCT-TCCTCTCAGA 228 ||||||| ||| | |||| || || ||||||| || Sbjct 206 TCTCAGTCCCAGTCGTGGCTGATCTATCCTCTCGGA 241 >seq170457 Length=565 Score = 77.0 bits (84), Expect = 7e-12 Identities = 104/144 (72%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 68 TTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGG 127 ||||||| | || | ||||| || | || ||| ||||| ||| |||| || | | Sbjct 42 TTTATTCTCCAGGAAGAAAAGTTCACGACCCATAGG-CCTTCTACCTCCACGTGACATTG 100 Query 128 CTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTG 187 || ||| || ||| || ||| || ||||| || ||||| ||||||||||||||| Sbjct 101 TTGCGCCAGGCTTTCGCCCGTTGTGAAAAATTCCCCATTGCTGTCTCCCGTAGGAGTTTA 160 Query 188 GACCGTGTCTCAGTTCCAATGTGG 211 ||| |||||||||| | | ||||| Sbjct 161 GACTGTGTCTCAGTCCTAGTGTGG 184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1066550774528