Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1
_202015-09-10] 210,444 sequences; 539,624,286 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq120100 86.0 1e-14
seq170457 77.0 7e-12
>seq120100
Length=747
Score = 86.0 bits (94), Expect = 1e-14
Identities = 78/96 (81%), Gaps = 2/96 (2%)
Strand=Plus/Plus
Query 135 AGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTG 194
|| || ||| |||||| || ||||| |||||||||||||||||||||| ||| |||||
Sbjct 146 AGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTG 205
Query 195 TCTCAGTTCCAAT-GTGGGGGACCT-TCCTCTCAGA 228
||||||| ||| | |||| || || ||||||| ||
Sbjct 206 TCTCAGTCCCAGTCGTGGCTGATCTATCCTCTCGGA 241
>seq170457
Length=565
Score = 77.0 bits (84), Expect = 7e-12
Identities = 104/144 (72%), Gaps = 1/144 (1%)
Strand=Plus/Plus
Query 68 TTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGG 127
||||||| | || | ||||| || | || ||| ||||| ||| |||| || | |
Sbjct 42 TTTATTCTCCAGGAAGAAAAGTTCACGACCCATAGG-CCTTCTACCTCCACGTGACATTG 100
Query 128 CTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTG 187
|| ||| || ||| || ||| || ||||| || ||||| |||||||||||||||
Sbjct 101 TTGCGCCAGGCTTTCGCCCGTTGTGAAAAATTCCCCATTGCTGTCTCCCGTAGGAGTTTA 160
Query 188 GACCGTGTCTCAGTTCCAATGTGG 211
||| |||||||||| | | |||||
Sbjct 161 GACTGTGTCTCAGTCCTAGTGTGG 184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1066550774528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |