Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq11 347 2e-93 seq26 230 4e-58 seq39 179 6e-43 seq41 176 7e-42 seq37 152 8e-35 seq51 143 4e-32 seq32 132 7e-29 seq6 113 7e-23 seq585 87.8 3e-15 >seq11 Length=21508407 Score = 347 bits (384), Expect = 2e-93 Identities = 233/256 (91%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||| ||||||||||| |||| |||||||||| ||||||||||||| | Sbjct 15611821 GTACAAAGGGCAGGGATGTAGTCAACGCAAGCT-GATGACTCGCACTTACTAGGAATT-C 15611764 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15611763 ATCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 15611704 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || | |||||||||||||| |||||||| |||||||||||||||||| |||| ||||| Sbjct 15611703 CCTGAGCCTGTCGGCCAAGGCTATAGACTCATTGAATACATCAGTGTAGTGCGCATGCGG 15611644 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 ||||||||||||||||||||||| || |||||||||||||||||||| |||||||| | Sbjct 15611643 TCCAGAACATCTAAGGGCATCACAAACTTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 15611584 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 15611583 GCCATAATCCCTCTAA 15611568 >seq26 Length=18140952 Score = 230 bits (254), Expect = 4e-58 Identities = 195/236 (83%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 21 GTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATT 80 ||||||| ||| ||||||| | | |||| |||||||| |||||||||||||||| |||| Sbjct 14763134 GTCAACGTGAG-TTGATGAGTTGTCCTTATTAGGAATT-CCTCGTTGAAGACCAATAATT 14763077 Query 81 GCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGG 140 || ||||||||||| ||||| |||||||||||||||||||| || || | | ||||| Sbjct 14763076 GCTATGATCTATCCTCATCATGATGAAATTTCAAAGATTACTTGGGTCTATTGATCAAGG 14763017 Query 141 TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCAT 200 |||||||||||||||||| |||||||| || ||| | |||||||||||||||||||| Sbjct 14763016 CTGTAGACTCGTTGAATACATTAGTGTAGCACGTGTGTGACCCAGAACATCTAAGGGCAT 14762957 Query 201 CACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255 |||| || ||||||| |||||| |||| | |||||| ||| || |||||| || Sbjct 14762956 CACAAACTTGTTATTCCCTCAATTTTCCTTAGCCTAAGCGGCTATAGTCCCTCTAA 14762901 >seq39 Length=212746 Score = 179 bits (198), Expect = 6e-43 Identities = 127/144 (88%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 112787 CCCATCACAATGAAATTTCAAAGATTACCCGGACCTGTCGGTCAAGGTTATAGACTCGTT 112846 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 |||||||| |||||| ||| | || ||| | ||||||||| |||||||||||||| ||| Sbjct 112847 GAATACATTAGTGTAACGCACATG-TGCCTAAAACATCTAAAGGCATCACAGACCTATTA 112905 Query 214 TTGCCTCAAACTTCCGTGGCCTAA 237 | ||||||||||| |||||||| Sbjct 112906 TCACCTCAAACTTCTTTGGCCTAA 112929 Score = 176 bits (194), Expect = 7e-42 Identities = 126/144 (88%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 38786 CCCATCACAATGAAATTTCAAAGATTACCCGGACCTGTCGGTCAAGGTTATAGACTCGTT 38845 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 |||||||| |||||| ||| || ||| | ||||||||| |||||||||||||| ||| Sbjct 38846 GAATACATTAGTGTAACGCATATG-TGCCTAAAACATCTAATGGCATCACAGACCTATTA 38904 Query 214 TTGCCTCAAACTTCCGTGGCCTAA 237 | ||||||||||| |||||||| Sbjct 38905 TCACCTCAAACTTCATTGGCCTAA 38928 Score = 149 bits (164), Expect = 9e-34 Identities = 121/144 (84%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||||||| |||||||||||||||||||||| ||||||| ||||| | |||||| || Sbjct 6025 CCCATCACAATGAAATTTCAAAGATTACCCG-ACCTGTCAATAAAGGTTAGAGACTCATT 6083 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 |||||||| | |||| ||| |||| | || | |||||||||||||||||||||| | ||| Sbjct 6084 GAATACATTAATGTAACGCACGTGTG-CCTAAAACATCTAAGGGCATCACAGACATATTA 6142 Query 214 TTGCCTCAAACTTCCGTGGCCTAA 237 | ||| |||||||| |||||||| Sbjct 6143 TCACCTTAAACTTCCTTGGCCTAA 6166 >seq41 Length=1300385 Score = 176 bits (194), Expect = 7e-42 Identities = 126/144 (88%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 731185 CCCATCACAATGAAATTTCAAAGATTACCCGGACCTGTCGGTTAAGGTTATAGACTCGTT 731126 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 |||||||| |||||| ||| | || || | ||||||||| |||||||||||||| ||| Sbjct 731125 GAATACATTAGTGTAACGCACATG-TGCTTAAAACATCTAAAGGCATCACAGACCTATTA 731067 Query 214 TTGCCTCAAACTTCCGTGGCCTAA 237 | |||||||||||| |||||||| Sbjct 731066 TCACCTCAAACTTCCTTGGCCTAA 731043 Score = 176 bits (194), Expect = 7e-42 Identities = 126/144 (88%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||||||| ||||||||||||||||||||| |||||||||| |||||| ||||||||||| Sbjct 821856 CCCATCACAATGAAATTTCAAAGATTACCCAGACCTGTCGGTCAAGGTTATAGACTCGTT 821797 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 |||||||| |||||| ||| | || || | ||||||||| |||||||||||||| ||| Sbjct 821796 GAATACATTAGTGTAACGCACATG-TGCTTAAAACATCTAATGGCATCACAGACCTATTA 821738 Query 214 TTGCCTCAAACTTCCGTGGCCTAA 237 | |||||||||||| |||||||| Sbjct 821737 TCACCTCAAACTTCCTTGGCCTAA 821714 Score = 158 bits (174), Expect = 2e-36 Identities = 122/144 (85%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||| ||| ||||||||||||||||||| |||||||||| |||||| |||||||| || Sbjct 600214 CCCACCACAATGAAATTTCAAAGATTACTCGGACCTGTCAATCAAGGTTATAGACTCATT 600155 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 |||||||| | |||| ||| | || ||| | |||||||||||||||||||||| | ||| Sbjct 600154 GAATACATTAATGTAACGCACATG-TGCCTAAAACATCTAAGGGCATCACAGACATATTA 600096 Query 214 TTGCCTCAAACTTCCGTGGCCTAA 237 | |||||||||||| |||||||| Sbjct 600095 TCACCTCAAACTTCCCTGGCCTAA 600072 Score = 156 bits (172), Expect = 6e-36 Identities = 123/146 (84%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 92 TCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCG 151 ||||||||| |||||||||||||||||||| | ||| | |||||| | ||||||| Sbjct 705080 TCCCCATCATAATGAAATTTCAAAGATTACCTAAGCTTGTTAGTCAAGGTTACAGACTCG 705021 Query 152 TTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGT 211 |||||||||| ||||||||| || || ||||| |||||||||||||||| |||| | | Sbjct 705020 TTGAATACATTAGTGTAGCGTGCATG-TGCCCAAAACATCTAAGGGCATCGTAGACGTAT 704962 Query 212 TATTGCCTCAAACTTCCGTGGCCTAA 237 ||||||||||||||||| |||||||| Sbjct 704961 TATTGCCTCAAACTTCCTTGGCCTAA 704936 Score = 149 bits (164), Expect = 9e-34 Identities = 120/144 (83%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||||||| ||||||||||||||||||| |||||||||| ||||| | |||||| || Sbjct 509337 CCCATCACAATGAAATTTCAAAGATTACTCGGACCTGTCAATAAAGGTTAGAGACTCATT 509278 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 |||||||| | |||| ||| |||| ||| | ||||||||||||||||||| || | ||| Sbjct 509277 GAATACATTAATGTAACGCACGTG-TGCCTAAAACATCTAAGGGCATCACAAACATATTA 509219 Query 214 TTGCCTCAAACTTCCGTGGCCTAA 237 | ||| |||||||| |||||||| Sbjct 509218 TCACCTTAAACTTCCTTGGCCTAA 509195 >seq37 Length=24396255 Score = 152 bits (168), Expect = 8e-35 Identities = 121/144 (84%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||||||| || |||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 16979720 CCCATCACAGTGGAATTTCAAAGATTACCCGGACCTGTCAATCAAGGTTATAGACTCGTT 16979661 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 | |||||| |||||| ||| | || | | | ||||||||||||||||||| |||| ||| Sbjct 16979660 GCATACATTAGTGTAACGCACATG-TGTCTAAAACATCTAAGGGCATCACAAACCTATTA 16979602 Query 214 TTGCCTCAAACTTCCGTGGCCTAA 237 | |||||||||| | |||||||| Sbjct 16979601 TCACCTCAAACTTTCTTGGCCTAA 16979578 Score = 143 bits (158), Expect = 4e-32 Identities = 119/144 (83%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 || ||||| || |||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 17251824 CCTATCACAGTGGAATTTCAAAGATTACCCGGACCTGTCAATCAAGGTTATAGACTCGTT 17251765 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 | |||||| |||||| | | | || | | | ||||||||||||||||||| |||| ||| Sbjct 17251764 GCATACATTAGTGTAACACACATG-TGTCTAAAACATCTAAGGGCATCACAAACCTATTA 17251706 Query 214 TTGCCTCAAACTTCCGTGGCCTAA 237 | |||||||||| | |||||||| Sbjct 17251705 TCACCTCAAACTTTCTTGGCCTAA 17251682 Score = 118 bits (130), Expect = 2e-24 Identities = 111/140 (79%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 87 ATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAG 146 |||| |||| || | ||||||||||||||| || |||| | ||| | ||||| |||| Sbjct 23654772 ATCT-TCCCTATTGCAATGAAATTTCAAAGACTAACCGGGCTTGTTGACCAAGACTATAG 23654714 Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 || |||||||||||| |||||| | |||||| ||| ||||| ||| ||||||||| | Sbjct 23654713 GTTCATTGAATACATCAATGTAGCATGTGTGCGGTCCAAAACATGTAAAGGCATCACAAA 23654654 Query 207 CCTGTTATTGCCTCAAACTT 226 |||| | || |||||||||| Sbjct 23654653 CCTGATCTTACCTCAAACTT 23654634 >seq51 Length=29360087 Score = 143 bits (158), Expect = 4e-32 Identities = 119/144 (83%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 94 CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTT 153 |||||||| ||||||||||||||||||| ||||| |||| |||||| ||||| || || Sbjct 24529077 CCCATCACAATGAAATTTCAAAGATTACTCGGACTTGTCAATCAAGGTTATAGATTCATT 24529136 Query 154 GAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 |||||||| | |||| | | | || ||| | ||||| |||||||||||||||| | ||| Sbjct 24529137 GAATACATTAATGTAACACACATG-TGCCTAAAACATATAAGGGCATCACAGACATATTA 24529195 Query 214 TTGCCTCAAACTTCCGTGGCCTAA 237 | |||||||||||| |||||||| Sbjct 24529196 TCACCTCAAACTTCCCTGGCCTAA 24529219 >seq32 Length=19818926 Score = 132 bits (146), Expect = 7e-29 Identities = 120/150 (80%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 107 AATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTG 166 |||| ||||||||| || | |||| |||||| ||||||||||||||||||||| || Sbjct 6550374 AATTGCAAAGATTATGTGGGCTTGTCAACCAAGGCTATAGACTCGTTGAATACATCAATG 6550433 Query 167 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 226 || | | | ||||| ||| |||||||||| |||||| ||||||||| |||||||||| || Sbjct 6550434 TAACACACATGCGGTCCAAAACATCTAAGAGCATCATAGACCTGTTGTTGCCTCAAATTT 6550493 Query 227 CCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255 || | |||||| | ||| |||||| || Sbjct 6550494 CCTTATCCTAAATTGTCATAGTCCCTCTAA 6550523 >seq6 Length=23867706 Score = 113 bits (124), Expect = 7e-23 Identities = 92/112 (82%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 58 TTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA 117 ||| || || ||||||||| |||| ||| ||||||||| ||||||||||||||||||||| Sbjct 776455 TTCTTCATTAAAGACCAACGATTGTAATTATCTATCCCTATCACGATGAAATTTCAAAGA 776396 Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAG 169 ||| ||| | ||||||| ||| ||| | | |||||||| |||| ||||| Sbjct 776395 TTATCCGAATCTGTCGGTGAAGACTATATATTTGTTGAATAAATCAATGTAG 776344 >seq585 Length=104249 Score = 87.8 bits (96), Expect = 3e-15 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 192 TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCC 250 ||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||| Sbjct 100557 TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCGGCCATAGTCCC 100616 Query 251 TCGAA 255 || || Sbjct 100617 TCTAA 100621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751986107505