Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq585 192 1e-46 seq32 132 9e-29 seq552 118 2e-24 >seq585 Length=104249 Score = 192 bits (212), Expect = 1e-46 Identities = 164/200 (82%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178 |||||||||||||| |||| | |||||| | |||| ||||| |||||| | ||| Sbjct 101213 ATACATTAGCATGGGATAACATCATAGGATTT-CGGTCCTATTCTGTTGGCCTTCGGGAT 101155 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 || ||||||||||| ||||| ||||||||| | ||||| || |||||||||||||| Sbjct 101154 CGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAAT 101095 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 |||||||||||| ||||| ||| ||||||||||| || |||||||||||||||||||| Sbjct 101094 TCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAAT 101035 Query 299 CAGTGAACGAAAGTTAGGGG 318 || ||||||||||| |||| Sbjct 101034 CA-AGAACGAAAGTTGGGGG 101016 >seq32 Length=19818926 Score = 132 bits (146), Expect = 9e-29 Identities = 149/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCG-AATACATTAGCAT 130 || ||||||| || ||||||||||| |||||||| |||| ||||| ||||||||| ||| Sbjct 10360212 CTGTTACTTTTAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTTAATACATTAACAT 10360271 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | ||| || | ||| |||| |||| | | | ||| | |||||||| Sbjct 10360272 GGGATAACATCATATGATTTT-GGTCATATTCTGTTAGCCTTTGGGATCATAGTAATGAT 10360330 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| | |||| ||| | | | ||||| || |||||||||||||||||||||||||| Sbjct 10360331 TAAGAAGGATGGTCAGAGACATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 10360390 Query 251 TGAAGACTAACTACTGC 267 ||||| || ||||| Sbjct 10360391 GAAAGACGAATAACTGC 10360407 >seq552 Length=312564 Score = 118 bits (130), Expect = 2e-24 Identities = 148/198 (75%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178 ||||||||| | ||||||| | |||||| | |||| ||||| ||||| || | || Sbjct 180240 ATACATTAGAAAGGAATAACATCATAGGATTT-CGGTCCTATTATGTTGACCTCGAAGAT 180182 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 || |||||||||| ||| |||| || |||| | ||||| ||| ||| ||| |||| | Sbjct 180181 CGAAGTAATGATTATTAGAGATAATCAGGGGCATTTGTATTTAATAGTC-GAGATGAATT 180123 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 | || |||| || ||||| | ||| ||||| | || |||||||| ||||||||||| Sbjct 180122 T-TTAGATTCATGAAAGACATATAACTACGAAATCATTTTCCAAGGATTTTTTCATTAAT 180064 Query 299 CAGTGAACGAAAGTTAGG 316 || |||||||||| || Sbjct 180063 CA-AAAACGAAAGTTGGG 180047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915182547136