Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1907 188 2e-45 seq1906 172 2e-40 seq301 168 2e-39 seq1 114 4e-23 seq43 89.7 2e-15 seq32 87.8 6e-15 >seq1907 Length=160928 Score = 188 bits (208), Expect = 2e-45 Identities = 377/549 (69%), Gaps = 25/549 (5%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 110347 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 110406 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 110407 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 110466 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 110467 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 110526 Query 182 CCGAAAACTATTTAG--GTAGTGCCTCAAGTATCACCATC-GGGGGTAGAGCACTGTTAT 238 |||||| || || | || | | | | |||| |||||| ||||||||| Sbjct 110527 CCGAAATGCGTTGAGGCGCAGCGGTT---GACTGGACATCTAGGGGTAAAGCACTGTTTC 110583 Query 239 GGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------GCA 289 || ||| | | ||| ||||||| | |||||||| |||| | || Sbjct 110584 GGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATCTGGCC 110641 Query 290 TC---AGTTTTACCGCGG-GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGA 345 || || | | ||| |||||| ||||| | |||| | | | ||||||| | Sbjct 110642 TCAAAAGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAA 110701 Query 346 AGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTG 405 | | ||||| | ||||||||||||| ||||||| ||| ||| | | || || || | Sbjct 110702 ACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGG 110759 Query 406 ATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAAC 465 ||| ||||||| |||| ||| || | |||||||||| | || ||||||||||||| Sbjct 110760 GGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAAT 110818 Query 466 AGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAG 525 |||||||| ||||| || ||| || || | |||| |||| ||| |||||| Sbjct 110819 AGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGATCTGCCGAAG 110877 Query 526 CAGTGGGAT 534 | ||||||| Sbjct 110878 CTGTGGGAT 110886 Score = 188 bits (208), Expect = 2e-45 Identities = 377/549 (69%), Gaps = 25/549 (5%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 139713 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 139654 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 139653 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 139594 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 139593 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 139534 Query 182 CCGAAAACTATTTAG--GTAGTGCCTCAAGTATCACCATC-GGGGGTAGAGCACTGTTAT 238 |||||| || || | || | | | | |||| |||||| ||||||||| Sbjct 139533 CCGAAATGCGTTGAGGCGCAGCGGTT---GACTGGACATCTAGGGGTAAAGCACTGTTTC 139477 Query 239 GGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------GCA 289 || ||| | | ||| ||||||| | |||||||| |||| | || Sbjct 139476 GGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATCTGGCC 139419 Query 290 TC---AGTTTTACCGCGG-GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGA 345 || || | | ||| |||||| ||||| | |||| | | | ||||||| | Sbjct 139418 TCAAAAGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAA 139359 Query 346 AGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTG 405 | | ||||| | ||||||||||||| ||||||| ||| ||| | | || || || | Sbjct 139358 ACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGG 139301 Query 406 ATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAAC 465 ||| ||||||| |||| ||| || | |||||||||| | || ||||||||||||| Sbjct 139300 GGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAAT 139242 Query 466 AGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAG 525 |||||||| ||||| || ||| || || | |||| |||| ||| |||||| Sbjct 139241 AGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGATCTGCCGAAG 139183 Query 526 CAGTGGGAT 534 | ||||||| Sbjct 139182 CTGTGGGAT 139174 >seq1906 Length=773279 Score = 172 bits (190), Expect = 2e-40 Identities = 321/462 (69%), Gaps = 27/462 (6%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || | || ||| |||| Sbjct 571718 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTTACTGGCCTTGGA 571659 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 571658 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 571599 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 571598 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 571541 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG----TCATTGCGACTTACCAAA 266 | || | | ||||||||||| |||||||| | |||| || |||||||| Sbjct 571540 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCCTTACCAAC 571481 Query 267 CCATTGCAAACTCCGAATGC--GC----ATCAGTTTTACCGCGGGAGTGAGGGCATGGGT 320 || | ||||||||||| | || ||| || ||| || || ||||| Sbjct 571480 CCCAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTAC----AGACAGACTTTTTGGGT 571425 Query 321 GCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGAC 380 |||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 571424 GCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAAT 571365 Query 381 AGCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAG 438 || ||| || || |||| |||| || | |||| | |||| || |||||||||| Sbjct 571364 CACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAG 571309 Query 439 CAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||| || ||| |||| |||||| |||||||| ||| || Sbjct 571308 CAGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 571268 >seq301 Length=1037459 Score = 168 bits (186), Expect = 2e-39 Identities = 320/462 (69%), Gaps = 27/462 (6%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||| | ||||| |||| ||||| | || | || ||| |||| Sbjct 11312 GACCCGAAACCGATCGATCCAGCCATGAGCAGGTTGAAGAGAGCTCTTACTGGCCTTGGA 11253 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 11252 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 11193 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 11192 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCAT--ATGATG 11135 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG----TCATTGCGACTTACCAAA 266 | || | | ||||||||||| |||||||| | |||| || |||||||| Sbjct 11134 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCCTTACCAAC 11075 Query 267 CCATTGCAAACTCCGAATGC--GC----ATCAGTTTTACCGCGGGAGTGAGGGCATGGGT 320 || | ||||||||||| | || |||| || ||| || || ||||| Sbjct 11074 CCCAGGGAAACTCCGAATACAGGCCTAGATCATTTGTAC----AGACAGACTTTTTGGGT 11019 Query 321 GCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGAC 380 |||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 11018 GCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAAT 10959 Query 381 AGCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAG 438 || ||| || || |||| |||| || | |||| | |||| || | |||||||| Sbjct 10958 CACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGACTTGGAAG 10903 Query 439 CAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 || ||| || |||||||| |||||| |||||||| ||| || Sbjct 10902 CAACCA-TCCTTTAAAGAAAGCGTAATAGCTCACTGGTCTAG 10862 >seq1 Length=23037639 Score = 114 bits (126), Expect = 4e-23 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 17140133 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 17140192 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 17140193 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 17140252 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 || ||||||| ||||| ||||||||||| || Sbjct 17140253 AGCGGATGAGTTGTGGTTAGGGGTGAAATGC 17140283 Score = 86.0 bits (94), Expect = 2e-14 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 48 GTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107 |||||||| ||||| ||| |||||| | ||| | || |||| |||||||| ||| Sbjct 17376373 GTGATCTATCCATGACCAAAATGAAGCTTAGGTGAAACTAAGTGGAAGTCCGAACTGACT 17376432 Query 108 AATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAA 167 |||||||| ||| | | |||| ||||| ||||||||||| || | | ||| || Sbjct 17376433 GATGTTGAAGAATCAACGAATGAATTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAG 17376492 Query 168 ATAGCTGGTTCTCTCCGAAA 187 ||| |||||||| |||||| Sbjct 17376493 CTAGTTGGTTCTCCCCGAAA 17376512 >seq43 Length=20304914 Score = 89.7 bits (98), Expect = 2e-15 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| || ||| ||| | | ||| |||| |||||||| ||||| Sbjct 10913655 CGAGTCTTCATAGGGCAACTGTCACTGC-TATGGACTCGAACTTGGGTGATCTATCCATG 10913597 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || ||||||||| |||| | | |||||||||| | Sbjct 10913596 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCAAACCGAGTGATGTTGAAAAGTC 10913537 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAA 149 || ||||||| ||||| || |||||||| Sbjct 10913536 AGTGGATGAGTTGTGGTTA-GGGTGAAA 10913510 >seq32 Length=19818926 Score = 87.8 bits (96), Expect = 6e-15 Identities = 294/452 (65%), Gaps = 18/452 (4%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||| ||| | |||||||| ||||| ||||||||||| | ||| | || ||||| Sbjct 10262073 GACCTGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAG 10262014 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 || | |||| | | || ||||| ||| | |||| || ||||| ||||||||||| || | Sbjct 10262013 GTACAAACCGAATGATCTTGAAGAATCATCGGATAAGTTGTGGTTAGGGGTGAAATGCCA 10261954 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCA 214 ||| || ||||||||| || | ||| || ||| || | | Sbjct 10261953 CTTGAACCCAAAACTAGCTGGTTATCCCTAAAATGGGTTGAGGCGCAGCGGTTGGCTGGA 10261894 Query 215 CCATCGGGGGTAGAGCACT-GTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGC 273 | | |||||| |||||| ||| || ||| | | |||| ||||||| | || Sbjct 10261893 CATTTAGGGGTAAAGCACTAGTTCTGTGCAGGCGACGAGAGCGA--TACCAAATCGAGGC 10261836 Query 274 AAACTCCGAATGC--------GCATCAG--TTTTACCG--CGGGAGTGAGGGCATGGGTG 321 ||||| |||| | || |||| | | | | | |||| |||| | Sbjct 10261835 AAACTTTGAATACTAGATTCGGCCTCAGAATGTCAAGGTCAACCAATGAGACGATGGAGG 10261776 Query 322 CTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA 381 |||| | | | ||| |||| || || ||||| | || |||||||| | ||||||| Sbjct 10261775 ATAAGCTTCATCGTCGATAGGAAAACAACCCGGATCACCAACTAAGGCCTCTAAATGACC 10261716 Query 382 GCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAG 441 ||| ||| | | || || || | ||| ||||||| |||| ||| | | |||||| Sbjct 10261715 GCTCAGTGATA--AAGGAGGTAGGGGTGCATAGACAGCCAGGAGGTTTACCTAGAAGCAT 10261658 Query 442 CCATTCATTTAAAGAGTGCGTAACAGCTCACT 473 || | || ||||||||||||| |||||||| Sbjct 10261657 TCA-CCCTTGAAAGAGTGCGTAATAGCTCACT 10261627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689567779328