Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq42 118 8e-22 >seq42 Length=30274277 Score = 118 bits (130), Expect = 8e-22 Identities = 358/548 (65%), Gaps = 15/548 (3%) Strand=Plus/Minus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| ||||| || || || || ||||| | ||||| ||||| | || | ||| Sbjct 25647485 ATGTACAAGAAGGCCGAGGCGTCGTTTTGGACAGCCGAGGAAGTCGACCTCTCTCAGGAC 25647426 Query 61156 ATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 | | | ||||| | | |||| || | || ||||| | ||| | | || Sbjct 25647425 CAGCGTCAATGGGAAAACCTCACCAGCGACGAGAAGCACTTCATCAGTCATATCCTTGCC 25647366 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAG 61275 ||||| |||||||| ||||| |||||| || || | | | | ||| | ||||| Sbjct 25647365 TTCTTCGCCGCTTCTGACGGAATCGTCCTCGAAAACCTCGCCGGAAGGTTCATGAAGGAG 25647306 Query 61276 GTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCAC 61335 || || || | ||||| ||| ||||| || || ||||||||||| || || ||||| Sbjct 25647305 GTCCAGGTCGCCGAGGCTCGTGCCTTCTATGGATTTCAGATTGCCATTGAAAACATCCAC 25647246 Query 61336 TCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC---GGGCGGAACGTGAA 61392 || |||||||||||| | | | || |||| |||| ||| | || | || || Sbjct 25647245 TCCGAGATGTACAGTCTGTTGTTAGAATCGTATATCAAGGATCCAAAGGAGAAA----AA 25647190 Query 61393 C-GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG--GAAAGCGGATTGGGCC 61449 | | | || | || ||||| || || || | ||| |||| |||||| | ||||| Sbjct 25647189 CAGGCTCTTTCACGCAATCGATACCATCCC--CTGTGTAGCGAAGAAAGCCCAGTGGGCT 25647132 Query 61450 TTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509 || |||||| | | | | || |||| ||||| |||| ||||| || Sbjct 25647131 CTCCGATGGATCGACGG---CTCCGAAACCTTTGCCGAACGCCTGCTCGCATTCGCCTGC 25647075 Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 || || || | || ||| ||| || | | || || ||| | |||||||| || Sbjct 25647074 GTGGAAGGCATCTTCTTCTCCGGAAGCTTCTGCTCGATATTCTGGCTAAAGAAACGCGGT 25647015 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || ||||| || | || ||| |||||||| || || || ||||||||| | || || Sbjct 25647014 CTCATGCCGGGATTAACTTTCTCAAATGAGTTAATCTCGCGAGACGAGGGCTTACACTGC 25646955 Query 61630 GATTTTGC 61637 || || || Sbjct 25646954 GACTTCGC 25646947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558759898480