Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq54 93.3 4e-17 seq11 93.3 4e-17 seq8 93.3 4e-17 seq4 87.8 2e-15 seq255 86.0 7e-15 seq861 82.4 8e-14 seq19 80.6 3e-13 seq499 78.8 1e-12 seq2 77.0 3e-12 seq60 75.2 1e-11 seq5 75.2 1e-11 >seq54 Length=280043 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| ||||||||| || ||||| | ||| | || ||| || Sbjct 19055 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGAGAGAAAGGTTGCCTCCTCATAAAGGG 18996 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | | ||||| || |||| || ||| |||||||| |||||||||||| || Sbjct 18995 G--GTCGCAGTGACTAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 18948 >seq11 Length=20703932 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 12019398 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 12019455 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 12019456 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 12019505 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 19185985 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 19185928 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 19185927 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 19185878 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 19187160 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 19187217 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 19187218 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 19187267 Score = 84.2 bits (92), Expect = 2e-14 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 |||||||||||||||| | ||| || |||||||| || |||| ||| | || ||| | Sbjct 20322079 TAAGGAACTAGGCAAAATAGCCCCGTTGCTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 20322022 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || | ||| || ||| ||| ||||||| ||| |||||||||||| || Sbjct 20322021 GGGGTCACAGTGATCAGGCCCAAGCAACTGCTTACCAAAAACACAGGTCT 20321972 Score = 73.4 bits (80), Expect = 4e-11 Identities = 87/117 (74%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 |||||||||||||||| | ||| ||||||||||| || || | ||| | || | | | Sbjct 17186667 TAAGGAACTAGGCAAAATAGCCCCATAACTTCGGGAGAAGGGCTGCCTCCTCACAGA--G 17186610 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | || || || || | || || ||||||||||||||||||||| || ||| || Sbjct 17186609 GGGGTCGTAGTGACCCAGCCCGGGTGACTGTTTAACAAAAACACAGGTCTCTGCAAA 17186553 >seq8 Length=23350829 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 11389321 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 11389264 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 11389263 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 11389214 >seq4 Length=30445767 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| | |||| | ||| ||||||| |||| || |||| ||| | || ||| || Sbjct 17930565 TAAGGAACTCGACAAAATAGCCCCGTAACTTTGGGAGAAGGGGTGCCTCCTCACAAAGGG 17930624 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | | ||||| || ||| |||||| |||||||| |||||||||||| || Sbjct 17930625 G--GTCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 17930672 Score = 73.4 bits (80), Expect = 4e-11 Identities = 87/117 (74%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| | ||| | || |||||||||||| || |||| ||| | || ||| | Sbjct 9625603 TAAGGAACTCAGTAAAATAGCCACGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 9625546 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | || ||||| || ||| || || ||| |||| |||||||||||| || ||| || Sbjct 9625545 GGGGTCGCAGTGACCAGGCCCGGGTGACTATTTACCAAAAACACAGGTCTTTGCAAA 9625489 Score = 73.4 bits (80), Expect = 4e-11 Identities = 87/117 (74%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| | ||| | || |||||||||||| || |||| ||| | || ||| | Sbjct 9666997 TAAGGAACTCAGTAAAATAGCCACGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 9666940 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | || ||||| || ||| || || ||| |||| |||||||||||| || ||| || Sbjct 9666939 GGGGTCGCAGTGACCAGGCCCGGGTGACTATTTACCAAAAACACAGGTCTTTGCAAA 9666883 >seq255 Length=128618 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 4471 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 4412 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| |||||||||||| || |||| Sbjct 4411 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 4372 >seq861 Length=27709 Score = 82.4 bits (90), Expect = 8e-14 Identities = 89/117 (76%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| || ||| | ||| |||||||||||| | |||| ||| | || ||| | Sbjct 17995 TAAGGAACTCGGAAAAATAGCCCCGTAACTTCGGGAGACGGGGTGCCTCCTCATAAA--G 18052 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | || ||||| || ||| || ||| |||||||| |||||||| ||| || ||| || Sbjct 18053 GGGGTCGCAGTGACCAGGCCCGGGCCACTGTTTACCAAAAACATAGGTCTCTGCAAA 18109 >seq19 Length=521597 Score = 80.6 bits (88), Expect = 3e-13 Identities = 86/113 (76%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| ||||||||||| ||| ||| ||| | || ||| | Sbjct 24713 TAAGGAACTTGGCAAAATAGCCCCATAACTTCGGGAGAAAAGGTGCCTTCTCATAAA--G 24770 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTG 192 | || |||| || ||| | |||||||||||| |||||||| ||| || || Sbjct 24771 GGGGTTGCAGTGACCAGGCTCGGGCAACTGTTTACCAAAAACATAGGTCTCTG 24823 >seq499 Length=69741 Score = 78.8 bits (86), Expect = 1e-12 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||||||| || | || |||| || |||| ||||||| ||| | || || ||| Sbjct 52074 TAAGGAACTAGGCCAAATAGCCTCGTAAGTTTGGGAGAAAGGGTGCCTCCTCACAA-TGG 52016 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||| ||||||| || ||| ||||||| |||||||||||| || Sbjct 52015 G-GGTTACAGTGAATAGGCCCGGGCGGCTGTTTACCAAAAACACAGGTCT 51967 >seq2 Length=27986743 Score = 77.0 bits (84), Expect = 3e-12 Identities = 83/109 (76%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGG 140 |||||||| ||||| | ||| ||||||| | || ||||||| ||| | || ||| || Sbjct 15718883 AAGGAACTCAGCAAAATAGCCCCGTAACTTTGAGAGAAAGGGTGCCTCCTCACAAAGAGG 15718942 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | |||| || ||| || |||||||||||| |||||||||||| || Sbjct 15718943 AT--CGCAATGACCAGGCCCGGGCAACTGTTTACCAAAAACACAGGTCT 15718989 >seq60 Length=270990 Score = 75.2 bits (82), Expect = 1e-11 Identities = 83/110 (75%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| ||||| | ||| |||||| |||| ||||||| ||| | || ||| || Sbjct 62232 TAAGGAACTCAGCAAAATAGCCCCATAACTTTGGGAGAAAGGGTGCCTCCTCACAAAGGG 62173 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | | ||||| || ||| | ||| | |||||| |||||||||||| || Sbjct 62172 G--GTCGCAGTGACCAGGCCAAGGTGATTGTTTACCAAAAACACAGGTCT 62125 >seq5 Length=31365312 Score = 75.2 bits (82), Expect = 1e-11 Identities = 83/110 (75%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| | ||| | ||| ||||||||||| || || | ||| | || ||| || Sbjct 21719126 TAAGGAACTTAGAAAAATAGCCCCATAACTTCGGGAGAAGGGATGCCTCCTCACAAAGGG 21719185 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || | ||| || ||| |||||| |||||||| |||||||||||| || Sbjct 21719186 GAT--CACAGTGACTAGACCCAGGCGACTGTTTACCAAAAACACAGGTCT 21719233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531175355806