Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq255 107 2e-21 seq11 107 2e-21 seq9 107 2e-21 seq6 93.3 5e-17 seq4 93.3 5e-17 seq2 89.7 6e-16 seq54 86.0 7e-15 seq861 78.8 1e-12 seq1 78.8 1e-12 seq60 77.0 4e-12 seq3 77.0 4e-12 seq65 75.2 1e-11 seq1547 73.4 4e-11 >seq255 Length=128618 Score = 107 bits (118), Expect = 2e-21 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | ||||||||| | Sbjct 4035 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 4094 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||||||||||||||| ||||| | Sbjct 4095 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 4154 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 4155 GACAAGGAATTTCGCTACCTTAGGACAGTTA 4185 >seq11 Length=20703932 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 19185605 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 19185664 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 19185665 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 19185723 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 19185724 ACAAGGAATTTCGCTACCTTAGGACCGTTA 19185753 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 19187540 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 19187481 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 19187480 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 19187422 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 19187421 ACAAGGAATTTCGCTACCTTAGGACCGTTA 19187392 Score = 104 bits (114), Expect = 3e-20 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||| ||| ||| Sbjct 12019778 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTCCACCGAG 12019719 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 12019718 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 12019660 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 12019659 ACAAGGAATTTCGCTACCTTAGGACCGTTA 12019630 Score = 84.2 bits (92), Expect = 2e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||| ||| |||| ||||||||| ||||||||||||| |||||||||||||||| Sbjct 20290755 TACACCTTTCATGCGGGTCAGAACTTACCTGACAAGGAATTTCACTACCTTAGGACCGTT 20290696 Query 173 A 173 | Sbjct 20290695 A 20290695 Score = 77.0 bits (84), Expect = 4e-12 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 167 ||| || ||||||||||||| |||||||| |||||||||||| |||||||||||| Sbjct 19413613 TACGCCTTTCGTGCAGGTCGAAACTTACCAGACAAGGAATTTTGCTACCTTAGGA 19413667 >seq9 Length=25348792 Score = 107 bits (118), Expect = 2e-21 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | ||||||||| | Sbjct 17815519 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 17815578 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||||||||||||||| ||||| | Sbjct 17815579 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 17815638 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 17815639 GACAAGGAATTTCGCTACCTTAGGACAGTTA 17815669 >seq6 Length=25259912 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 6701968 TACACCTTTCGTGCGGGTCAAAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 6702027 Query 173 A 173 | Sbjct 6702028 A 6702028 >seq4 Length=30445767 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 17949592 TACGCCTTTCGTGCGGGTCGGAACTTACCCAACAAGGAATTTCGCTACCTTAGGACCGTT 17949533 Query 173 A 173 | Sbjct 17949532 A 17949532 Score = 91.5 bits (100), Expect = 2e-16 Identities = 110/151 (73%), Gaps = 7/151 (5%) Strand=Plus/Minus Query 26 GGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGC 85 ||||||| |||| || ||| ||||||||||||| || | | |||||||||||| Sbjct 9139211 GGTCTTTCTGTCCATGTGCAGGTCGTCGGCATCTTCACAGACATGTCTATTTCACTGAGC 9139152 Query 86 ---TCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | |||||| |||||| ||||||||||||| |||||| || Sbjct 9139151 CTTTCTCCA---AGACAGCGCCCAGATCGTTACACCTTTCGTGCAGGTCGAAACTTATCC 9139095 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||| ||||||||||||||||| ||| Sbjct 9139094 GACAAGGAA-TTCGCTACCTTAGGACCATTA 9139065 Score = 80.6 bits (88), Expect = 3e-13 Identities = 55/61 (90%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || |||||| ||||||||||||| |||| |||||| |||||||||||||||||||| Sbjct 8626730 TACGCCTTTCGTGTAGGTCGGAACTTATCCGAGAAGGAA-TTCGCTACCTTAGGACCGTT 8626672 Query 173 A 173 | Sbjct 8626671 A 8626671 >seq2 Length=27986743 Score = 89.7 bits (98), Expect = 6e-16 Identities = 109/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| ||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 16114518 GGGTCTTTCTGTCTAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 16114577 Query 85 CTCACGGT-TGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| |||||| ||| ||| ||| || |||||||| Sbjct 16114578 C-CTCTCTCTGAGACATTGCTCAGATCGTTACACCTTTCATGCGAGTCAGAGCTTACCCG 16114636 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 16114637 ACAAGGAATTTCGCTACCTTAGGACCGTTA 16114666 Score = 80.6 bits (88), Expect = 3e-13 Identities = 107/150 (71%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||||| |||| || |||| || ||||||||| || | | |||||| |||| Sbjct 15719261 GGGTCTTTTTGTCCAGGTGCAGGTACTCCACATCTTCACAGACATGTCTATTTCATTGAG 15719202 Query 85 CTCACGGT-TGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | | |||||| ||| || || || | |||||||| | ||||| Sbjct 15719201 C-CTCTCTCTAAGACAGTGCCCAGATCGTTACCCCTTTTGTACGGGTCGGAAATGACCCG 15719143 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 | |||||||||||||||||||||||| ||| Sbjct 15719142 ATAAGGAATTTCGCTACCTTAGGACCATTA 15719113 >seq54 Length=280043 Score = 86.0 bits (94), Expect = 7e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || ||||| | |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 17399 CCGTTCGTACGGGTCGGAACTTACCCGACAAGGAATTTCGCTATCTTAGGACCGTTA 17343 Score = 78.8 bits (86), Expect = 1e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||| |||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 18763 TACGCCTTTCGTAGGGGTCAGAACTTACCCAACAAGGAATTTCGCTACCTTAGGACCGTT 18822 Query 173 A 173 | Sbjct 18823 A 18823 >seq861 Length=27709 Score = 78.8 bits (86), Expect = 1e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || || |||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 18287 TACGCCTTTTATGCAGGTCAAAACTTACCCGACAAGGAATTTTGCTACCTTAGGACCGTT 18228 Query 173 A 173 | Sbjct 18227 A 18227 Score = 77.0 bits (84), Expect = 4e-12 Identities = 106/150 (71%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||||| |||| || |||| || |||||||| || | | ||||||| ||| Sbjct 19138 GGGTCTTTTTGTCCAGGTGCAGGTAGTCTACATCTTCATAGACATGTCTATTTCACCGAG 19197 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | |||||| |||||| ||||||| | ||| |||||||||| Sbjct 19198 C-CTCTCTCCGAGACAATGCTCAGATCGTTACACCTTTCGTGCTGTTCGAAACTTACCCG 19256 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||| ||||| || |||| ||| Sbjct 19257 ACAAGGAATTTCACTACCCTAAGACCATTA 19286 >seq1 Length=42390363 Score = 78.8 bits (86), Expect = 1e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| ||| ||||||||||| |||||||||||| ||||||||||||||| Sbjct 20063842 TACGCCTTTCGTGCGGGTTGGAACTTACCCAACAAGGAATTTCATTACCTTAGGACCGTT 20063901 Query 173 A 173 | Sbjct 20063902 A 20063902 >seq60 Length=270990 Score = 77.0 bits (84), Expect = 4e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || ||| ||| |||||||||||| |||| |||||||||| ||||||||||||||||| Sbjct 61944 CCTTTCATGCTGGTCGGAACTTATCCGATAAGGAATTTCACTACCTTAGGACCGTTA 62000 >seq3 Length=26737297 Score = 77.0 bits (84), Expect = 4e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || |||||| ||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct 11565688 CCTTTCGTGTGGGTTAGAACTTACCAGACAAGGAATTTCGCTACCTTAGGACCGTTA 11565744 >seq65 Length=262167 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| |||||| |||| ||||||||||| |||||||||||||||||||| || ||| Sbjct 123463 TACACCTTTCGTGGGGGTCAAAACTTACCCGAAAAGGAATTTCGCTACCTTAGTACTGTT 123522 Query 173 A 173 | Sbjct 123523 A 123523 >seq1547 Length=9344 Score = 73.4 bits (80), Expect = 4e-11 Identities = 49/55 (89%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 167 ||| || ||||||||||||| |||||||| |||||||||||| |||||||| ||| Sbjct 8671 TACGCCTTTCGTGCAGGTCGAAACTTACCAGACAAGGAATTTTGCTACCTTTGGA 8617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547174613511