Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= AAMG01001307.1 Length=477 Score E Sequences producing significant alignments: (Bits) Value seq3907 149 2e-33 >seq3907 Length=2086 Score = 149 bits (164), Expect = 2e-33 Identities = 260/377 (69%), Gaps = 6/377 (2%) Strand=Plus/Plus Query 103 CGCCGGTGGTGTTGGTCGGCCACTCCTATGGCGGCAACGTTATCAGTGACGCGGCCAACG 162 |||| || || |||||||||| || || ||||| ||| |||| || || || | | Sbjct 15 CGCCCGTCGTCCTGGTCGGCCATTCGTACGGCGGGGCCGTGATCACGGAAGCCGCGGAGG 74 Query 163 ATCATGCAAACGTCAAAGCCCTGGTTTACGTCAGTGCGTTTGCACCTGAGGCCGGGGAAA 222 || | |||||||| | ||||| ||||| |||||| | || || | || || | Sbjct 75 GCCACGACAACGTCAAGTCGCTGGTCTACGTGGCGGCGTTTTCGCCCGAAGTGGGCGAGA 134 Query 223 CCGTCGCCGGGCTGGCCGGCAAATTCCCGGGCAGTACGCTGGGCCCAACGCTGGCTGCGC 282 | |||||||| || |||| ||||||||||| ||||| || || |||| || ||| Sbjct 135 GCTCGGCCGGGCTCTCCAGCAAGTTCCCGGGCAGCACGCTCGGTCCCGCGCTCGCGCCGC 194 Query 283 CTGTACCGCTGGCCGATGGGGGCAAGGACTNNNnnnnnnnGCAGGACAAGTTTCACAACC 342 | || |||||| | | ||| | ||||||| |||||||||||| | | Sbjct 195 CGGTGCCGCTGTCGGGTGGAGACAAGGACCTCTACGTGCAGCAGGACAAGTTCCCTGCGC 254 Query 343 AGTTCGCCGCTGACGTCCCCGCTAAAGA-GGCGGCATTGATGGCCGCCACCCAACGCCCG 401 ||||||||| ||||| ||||| |||| |||| ||||||||||| || ||||| Sbjct 255 AGTTCGCCGGCGACGT-TCCGCTGAAGACGGCGAAGGTGATGGCCGCCGAGCAGCGCCCC 313 Query 402 GTAACGGAAGCGGCGCTCAACGAAGC--GTCCGGCAGCCCTGCCTGGAAGCATATACCGT 459 | |||| | || ||||| || || | || ||| || |||||||| || |||| Sbjct 314 ATCACGGCTGGCGCCCTCAATGAGGCAGAAACCGCTGCC--GCGTGGAAGCACATCCCGT 371 Query 460 CCTGGTACATCTACGGC 476 | ||| ||||||||||| Sbjct 372 CGTGGCACATCTACGGC 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1423931804640