Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq12 89.7 9e-16 >seq12 Length=19346091 Score = 89.7 bits (98), Expect = 9e-16 Identities = 195/293 (67%), Gaps = 22/293 (8%) Strand=Plus/Plus Query 2 GAGTCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGGG 61 |||||| ||||| ||| | || || || ||| | ||| |||| || | | |||| Sbjct 6174024 GAGTCAGTGTCCGAGGTCGTGCGTGGGAGTGAGGAAAGATGGGAAGCTCTTCAGCTGGGC 6174083 Query 62 AGAGTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCTT 121 ||||| ||| || || ||| ||| | || || | || || || | ||||||| Sbjct 6174084 TGAGTCTGACTCGGGGGTCCGAGTTGGAACGTGTGGGATCGAACTGGGGGCCCGGACCTT 6174143 Query 122 GGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACAA 181 || | || || | || ||||| | |||||||| || || ||||| Sbjct 6174144 CGTATCGGGCTCCGCATACCAAGGTGGGCCACATGGATTTTTTTTAGT------------ 6174191 Query 182 AAAGGATGGGCAAAATAGTAAATTGACAAAGATTG---ATGTTCCTGATGAATTTTCTGG 238 ||| ||||||||| ||||||||| ||||| | |||| ||||||| ||| || Sbjct 6174192 ---GGAAGGGCAAAATGGTAAATTGAAGAAGATCGTAGATGTACCTGATGGGTTTATGGG 6174248 Query 239 ATTTGTGCAATCTGGATGCTGTGTGGAGATCTGAAATTTTGGATTATATTATT 291 || ||||| || || |||||||||||||| | |||||| ||| |||| || Sbjct 6174249 GTTCGTGCAGTCAGGCTGCTGTGTGGAGATTT--AATTTT--ATTTTATTTTT 6174297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918356017824