Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ananas_20comosus_20[refseq_20GCF_5F001540865.1_202016-03-14] 3,129 sequences; 382,055,938 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1452 365 7e-99 seq11 315 1e-83 >seq1452 Length=10809 Score = 365 bits (404), Expect = 7e-99 Identities = 242/259 (93%), Gaps = 7/259 (3%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGC-TTACTAGGAATTTC 60 |||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||| | Sbjct 1509 TACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCATTACTAGGCATT-C 1452 Query 61 CTCGTTGAAGACCAACAATTGCAATGAT-CTATCCCCA-TCACGATGAAATTTCA-AAGA 117 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| Sbjct 1451 CTCGTTGAAGACCAACAATTGCAATGATTCTATCCCCAATCACGATGAAATTTCCCAAGA 1392 Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1391 TTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 1332 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1331 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTGA 1272 Query 238 AAGGCCAT-CTCCCTCGAA 255 |||||| |||||| || Sbjct 1271 GCGGCCATAGTCCCTCTAA 1253 >seq11 Length=13096665 Score = 315 bits (348), Expect = 1e-83 Identities = 215/237 (91%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||| | ||||||||| |||| |||||||||||||||||||| ||| | Sbjct 7470481 GTACAAAGGGCAGGGATGCAGTCAACGCAAGCT-GATGACTCGCGCTTACTAGGCATT-C 7470424 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 7470423 CACGTTGAAGACCAACAATTGCAATGATCTATTCCCATCACGATGAAATTTTTCAAGATT 7470364 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || | | ||| |||||||||| |||||||||||||||||||||||||||| | |||||| Sbjct 7470363 ACTCAGGCCTATCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCACACGTGCG 7470304 Query 180 -GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCT 235 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 7470303 TGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTTTGTGGCCT 7470247 Score = 233 bits (258), Expect = 3e-59 Identities = 152/165 (92%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTC 132 || ||||||||||||||||||||||||||||||||||| |||||||||||| || ||| Sbjct 7471036 AATAATTGCAATGATCTATCCCCATCACGATGAAATTTTTCAAGATTACCCGGGCCCGTC 7470977 Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 7470976 GGCCAAGGCTATAGACTCGTTGAATATATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 7470917 Query 193 AAGGGCATCACAGACC--TGTTATTGCCTCAAACTTCCGTGGCCT 235 |||||||||||||||| | |||||||||||||||| |||||||| Sbjct 7470916 AAGGGCATCACAGACCTATATTATTGCCTCAAACTTTCGTGGCCT 7470872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751977205235